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#ifndef PCL_REGISTRATION_TRANSFORMATION_ESTIMATION_LM_HPP_
#define PCL_REGISTRATION_TRANSFORMATION_ESTIMATION_LM_HPP_

#include <pcl/registration/warp_point_rigid_6d.h>

#include <unsupported/Eigen/NonLinearOptimization>

//////////////////////////////////////////////////////////////////////////////////////////////
template <typename PointSource, typename PointTarget, typename MatScalar>
pcl::registration::TransformationEstimationLM<PointSource, PointTarget, MatScalar>::
    TransformationEstimationLM()
: tmp_src_()
, tmp_tgt_()
, tmp_idx_src_()
, tmp_idx_tgt_()
, warp_point_(new WarpPointRigid6D<PointSource, PointTarget, MatScalar>){};

//////////////////////////////////////////////////////////////////////////////////////////////
template <typename PointSource, typename PointTarget, typename MatScalar>
void
pcl::registration::TransformationEstimationLM<PointSource, PointTarget, MatScalar>::
    estimateRigidTransformation(const pcl::PointCloud<PointSource>& cloud_src,
                                const pcl::PointCloud<PointTarget>& cloud_tgt,
                                Matrix4& transformation_matrix) const
{

  // <cloud_src,cloud_src> is the source dataset
  if (cloud_src.size() != cloud_tgt.size()) {
    PCL_ERROR("[pcl::registration::TransformationEstimationLM::"
              "estimateRigidTransformation] ");
    PCL_ERROR("Number or points in source (%zu) differs than target (%zu)!\n",
              static_cast<std::size_t>(cloud_src.size()),
              static_cast<std::size_t>(cloud_tgt.size()));
    return;
  }
  if (cloud_src.size() < 4) // need at least 4 samples
  {
    PCL_ERROR("[pcl::registration::TransformationEstimationLM::"
              "estimateRigidTransformation] ");
    PCL_ERROR("Need at least 4 points to estimate a transform! Source and target have "
              "%zu points!\n",
              static_cast<std::size_t>(cloud_src.size()));
    return;
  }

  int n_unknowns = warp_point_->getDimension();
  VectorX x(n_unknowns);
  x.setZero();

  // Set temporary pointers
  tmp_src_ = &cloud_src;
  tmp_tgt_ = &cloud_tgt;

  OptimizationFunctor functor(static_cast<int>(cloud_src.size()), this);
  Eigen::NumericalDiff<OptimizationFunctor> num_diff(functor);
  // Eigen::LevenbergMarquardt<Eigen::NumericalDiff<OptimizationFunctor>, double> lm
  // (num_diff);
  Eigen::LevenbergMarquardt<Eigen::NumericalDiff<OptimizationFunctor>, MatScalar> lm(
      num_diff);
  int info = lm.minimize(x);

  // Compute the norm of the residuals
  PCL_DEBUG(
      "[pcl::registration::TransformationEstimationLM::estimateRigidTransformation]");
  PCL_DEBUG("LM solver finished with exit code %i, having a residual norm of %g. \n",
            info,
            lm.fvec.norm());
  PCL_DEBUG("Final solution: [%f", x[0]);
  for (int i = 1; i < n_unknowns; ++i)
    PCL_DEBUG(" %f", x[i]);
  PCL_DEBUG("]\n");

  // Return the correct transformation
  warp_point_->setParam(x);
  transformation_matrix = warp_point_->getTransform();

  tmp_src_ = nullptr;
  tmp_tgt_ = nullptr;
}

//////////////////////////////////////////////////////////////////////////////////////////////
template <typename PointSource, typename PointTarget, typename MatScalar>
void
pcl::registration::TransformationEstimationLM<PointSource, PointTarget, MatScalar>::
    estimateRigidTransformation(const pcl::PointCloud<PointSource>& cloud_src,
                                const pcl::Indices& indices_src,
                                const pcl::PointCloud<PointTarget>& cloud_tgt,
                                Matrix4& transformation_matrix) const
{
  if (indices_src.size() != cloud_tgt.size()) {
    PCL_ERROR(
        "[pcl::registration::TransformationEstimationLM::estimateRigidTransformation] "
        "Number or points in source (%zu) differs than target (%zu)!\n",
        indices_src.size(),
        static_cast<std::size_t>(cloud_tgt.size()));
    return;
  }

  // <cloud_src,cloud_src> is the source dataset
  transformation_matrix.setIdentity();

  const auto nr_correspondences = cloud_tgt.size();
  pcl::Indices indices_tgt;
  indices_tgt.resize(nr_correspondences);
  for (std::size_t i = 0; i < nr_correspondences; ++i)
    indices_tgt[i] = i;

  estimateRigidTransformation(
      cloud_src, indices_src, cloud_tgt, indices_tgt, transformation_matrix);
}

//////////////////////////////////////////////////////////////////////////////////////////////
template <typename PointSource, typename PointTarget, typename MatScalar>
inline void
pcl::registration::TransformationEstimationLM<PointSource, PointTarget, MatScalar>::
    estimateRigidTransformation(const pcl::PointCloud<PointSource>& cloud_src,
                                const pcl::Indices& indices_src,
                                const pcl::PointCloud<PointTarget>& cloud_tgt,
                                const pcl::Indices& indices_tgt,
                                Matrix4& transformation_matrix) const
{
  if (indices_src.size() != indices_tgt.size()) {
    PCL_ERROR(
        "[pcl::registration::TransformationEstimationLM::estimateRigidTransformation] "
        "Number or points in source (%lu) differs than target (%lu)!\n",
        indices_src.size(),
        indices_tgt.size());
    return;
  }

  if (indices_src.size() < 4) // need at least 4 samples
  {
    PCL_ERROR("[pcl::IterativeClosestPointNonLinear::estimateRigidTransformationLM] ");
    PCL_ERROR("Need at least 4 points to estimate a transform! Source and target have "
              "%lu points!",
              indices_src.size());
    return;
  }

  int n_unknowns = warp_point_->getDimension(); // get dimension of unknown space
  VectorX x(n_unknowns);
  x.setConstant(n_unknowns, 0);

  // Set temporary pointers
  tmp_src_ = &cloud_src;
  tmp_tgt_ = &cloud_tgt;
  tmp_idx_src_ = &indices_src;
  tmp_idx_tgt_ = &indices_tgt;

  OptimizationFunctorWithIndices functor(static_cast<int>(indices_src.size()), this);
  Eigen::NumericalDiff<OptimizationFunctorWithIndices> num_diff(functor);
  // Eigen::LevenbergMarquardt<Eigen::NumericalDiff<OptimizationFunctorWithIndices> > lm
  // (num_diff);
  Eigen::LevenbergMarquardt<Eigen::NumericalDiff<OptimizationFunctorWithIndices>,
                            MatScalar>
      lm(num_diff);
  int info = lm.minimize(x);

  // Compute the norm of the residuals
  PCL_DEBUG(
      "[pcl::registration::TransformationEstimationLM::estimateRigidTransformation] LM "
      "solver finished with exit code %i, having a residual norm of %g. \n",
      info,
      lm.fvec.norm());
  PCL_DEBUG("Final solution: [%f", x[0]);
  for (int i = 1; i < n_unknowns; ++i)
    PCL_DEBUG(" %f", x[i]);
  PCL_DEBUG("]\n");

  // Return the correct transformation
  warp_point_->setParam(x);
  transformation_matrix = warp_point_->getTransform();

  tmp_src_ = nullptr;
  tmp_tgt_ = nullptr;
  tmp_idx_src_ = tmp_idx_tgt_ = nullptr;
}

//////////////////////////////////////////////////////////////////////////////////////////////
template <typename PointSource, typename PointTarget, typename MatScalar>
inline void
pcl::registration::TransformationEstimationLM<PointSource, PointTarget, MatScalar>::
    estimateRigidTransformation(const pcl::PointCloud<PointSource>& cloud_src,
                                const pcl::PointCloud<PointTarget>& cloud_tgt,
                                const pcl::Correspondences& correspondences,
                                Matrix4& transformation_matrix) const
{
  const auto nr_correspondences = correspondences.size();
  pcl::Indices indices_src(nr_correspondences);
  pcl::Indices indices_tgt(nr_correspondences);
  for (std::size_t i = 0; i < nr_correspondences; ++i) {
    indices_src[i] = correspondences[i].index_query;
    indices_tgt[i] = correspondences[i].index_match;
  }

  estimateRigidTransformation(
      cloud_src, indices_src, cloud_tgt, indices_tgt, transformation_matrix);
}

//////////////////////////////////////////////////////////////////////////////////////////////
template <typename PointSource, typename PointTarget, typename MatScalar>
int
pcl::registration::TransformationEstimationLM<PointSource, PointTarget, MatScalar>::
    OptimizationFunctor::operator()(const VectorX& x, VectorX& fvec) const
{
  const PointCloud<PointSource>& src_points = *estimator_->tmp_src_;
  const PointCloud<PointTarget>& tgt_points = *estimator_->tmp_tgt_;

  // Initialize the warp function with the given parameters
  estimator_->warp_point_->setParam(x);

  // Transform each source point and compute its distance to the corresponding target
  // point
  for (int i = 0; i < values(); ++i) {
    const PointSource& p_src = src_points[i];
    const PointTarget& p_tgt = tgt_points[i];

    // Transform the source point based on the current warp parameters
    Vector4 p_src_warped;
    estimator_->warp_point_->warpPoint(p_src, p_src_warped);

    // Estimate the distance (cost function)
    fvec[i] = estimator_->computeDistance(p_src_warped, p_tgt);
  }
  return (0);
}

//////////////////////////////////////////////////////////////////////////////////////////////
template <typename PointSource, typename PointTarget, typename MatScalar>
int
pcl::registration::TransformationEstimationLM<PointSource, PointTarget, MatScalar>::
    OptimizationFunctorWithIndices::operator()(const VectorX& x, VectorX& fvec) const
{
  const PointCloud<PointSource>& src_points = *estimator_->tmp_src_;
  const PointCloud<PointTarget>& tgt_points = *estimator_->tmp_tgt_;
  const pcl::Indices& src_indices = *estimator_->tmp_idx_src_;
  const pcl::Indices& tgt_indices = *estimator_->tmp_idx_tgt_;

  // Initialize the warp function with the given parameters
  estimator_->warp_point_->setParam(x);

  // Transform each source point and compute its distance to the corresponding target
  // point
  for (int i = 0; i < values(); ++i) {
    const PointSource& p_src = src_points[src_indices[i]];
    const PointTarget& p_tgt = tgt_points[tgt_indices[i]];

    // Transform the source point based on the current warp parameters
    Vector4 p_src_warped;
    estimator_->warp_point_->warpPoint(p_src, p_src_warped);

    // Estimate the distance (cost function)
    fvec[i] = estimator_->computeDistance(p_src_warped, p_tgt);
  }
  return (0);
}

//#define PCL_INSTANTIATE_TransformationEstimationLM(T,U) template class PCL_EXPORTS
// pcl::registration::TransformationEstimationLM<T,U>;

#endif /* PCL_REGISTRATION_TRANSFORMATION_ESTIMATION_LM_HPP_ */
