 Pakistan Army retained their title in 2006-07 where he set a new Pakistani goalkeeping record by not conceding a goal for 1,260 minutes.As is the case with most, if not all, Army players, Jaffar Khan is still in service with the Pakistan Army as a Non-Commissioned Officer and during the 2006-07 season was called up to service for UN peacekeeping operations in Sierra Leone.He returned to play competitive football in 2009.