Create README.md

README.md

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+---
+license: cc-by-4.0
+language:
+- es
+tags:
+- casimedicos
+- explainability
+- medical exams
+- medical question answering
+- extractive question answering
+- squad
+- multilinguality
+- LLMs
+- LLM
+pretty_name: casimedicos-squad
+configs:
+- config_name: es
+  data_files:
+  - split: train
+    path:
+    - data/es/es_train_casimedicos_squad.json
+  - split: validation
+    path:
+    - data/es/es_dev_casimedicos_squad.json
+  - split: test
+    path:
+    - data/es/es_test_casimedicos_squad.json
+task_categories:
+- question-answering
+size_categories:
+- 1K<n<10K
+---
+
+<p align="center">
+    <br>
+    <img src="http://www.ixa.eus/sites/default/files/anitdote.png" style="height: 200px;">
+    <br>
+
+# Antidote CasiMedicos in SQuAD Format for Explanatory Argument Extraction
+
+We present a new multilingual parallel medical dataset of commented medical exams which includes not only explanatory arguments
+for the correct answer but also arguments to explain why the remaining possible answers are incorrect.
+
+This dataset can be used for various NLP tasks including: **Medical Question Answering**, **Explanatory Argument Extraction** or **Explanation Generation**.
+
+The data source consists of Resident Medical Intern or Médico Interno Residente (MIR) exams, originally
+created by [CasiMedicos](https://www.casimedicos.com), a Spanish community of medical professionals who collaboratively, voluntarily, 
+and free of charge, publishes written explanations about the possible answers included in the MIR exams. The aim is to generate a resource that
+helps future medical doctors to study towards the MIR examinations. The commented MIR exams, including the explanations, are published in the [CasiMedicos 
+Project MIR 2.0 website](https://www.casimedicos.com/mir-2-0/).
+
+We have extracted, clean, structure and annotated the available data so that each document in **casimedicos-raw** dataset includes the clinical case, the correct answer, 
+the multiple-choice questions and the annotated explanations written by native Spanish medical doctors.
+
+Furthermore, the original Spanish data has been translated to create a **parallel multilingual dataset** in 4 languages: **English, French, Italian and Spanish**.
+
+<table style="width:33%">
+    <tr>
+         <th>Antidote CasiMedicos splits</th>
+     <tr>
+         <td>train</td>
+         <td>434</td>
+     </tr>
+     <tr>
+         <td>validation</td>
+         <td>63</td>
+     </tr>
+     <tr>
+         <td>test</td>
+         <td>125</td>
+     </tr>
+ </table>
+
+- 📖 Paper:[Explanatory Argument Extraction of Correct Answers in Resident Medical Exams](https://arxiv.org/abs/2312.00567)
+- 💻 Github Repo (Data and Code): [https://github.com/ixa-ehu/antidote-casimedicos](https://github.com/ixa-ehu/antidote-casimedicos)
+- 🌐 Project Website: [https://univ-cotedazur.eu/antidote](https://univ-cotedazur.eu/antidote)
+- Funding: CHIST-ERA XAI 2019 call. Antidote (PCI2020-120717-2) funded by MCIN/AEI /10.13039/501100011033 and by European Union NextGenerationEU/PRTR
+
+
+## Example
+
+<p align="center">
+<img src="https://github.com/ixa-ehu/antidote-casimedicos/blob/main/casimedicos-exp.png?raw=true" style="height: 650px;">
+</p>
+
+In this repository you can find the following data:
+
+- **casimedicos-squad**: The textual content including Clinical Case (C), Question (Q), Possible Answers (P), and Explanation (E) as shown in the example above.
+
+## Data Explanation
+
+The following attributes composed **casimedicos-raw**:
+
+- **id**: unique doc identifier.
+- **year**: year in which the exam was published by the Spanish Ministry of Health.
+- **question_id_specific**: id given to the original exam published by the Spanish Ministry of Health.
+- **full_question**: Clinical Case (C) and Question (Q) as illustrated in the example document above.
+- **full answer**: Full commented explanation (E) as illustrated in the example document above.
+- **type**: medical speciality.
+- **options**: Possible Answers (P) as illustrated in the example document above.
+- **correct option**: solution to the exam question.
+
+Additionally, the following jsonl attribute was added to create **casimedicos-exp**:
+
+- **explanations**: for each possible answer above, manual annotation states whether:
+  1. the explanation for each possible answer exists in the full comment (E) and
+  2. if present, then we provide character and token offsets plus the text corresponding to the explanation for each possible answer.
+
+ The process of manually annotating the corpus consisted of specifying where the explanations of the correct and incorrect answers begin and end. 
+ In order to obtain grammatically complete correct answer explanations, annotating full sentences or subordinate clauses was preferred over
+ shorter spans. 
+
+
+## Citation
+
+
+If you use this data please **cite the following paper**:
+
+```bibtex
+@misc{goenaga2023explanatory,
+      title={Explanatory Argument Extraction of Correct Answers in Resident Medical Exams}, 
+      author={Iakes Goenaga and Aitziber Atutxa and Koldo Gojenola and Maite Oronoz and Rodrigo Agerri},
+      year={2023},
+      eprint={2312.00567},
+      archivePrefix={arXiv}
+}
+```
+
+**Contact**: [Iakes Goenaga](http://www.hitz.eus/es/node/65) and [Rodrigo Agerri](https://ragerri.github.io/)
+HiTZ Center - Ixa, University of the Basque Country UPV/EHU