GenoTEX / p3 /regress /Ankylosing_Spondylitis /significant_genes_condition_Psoriasis.json
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{
"significant_genes": {
"Variable": [
"ADGRG5",
"ADH1C",
"ABHD11",
"ABHD18",
"ABLIM1",
"ABHD12",
"ARHGAP40",
"ANKS1B",
"ACP3",
"ABTB2",
"ADAMTS4",
"A1BG-AS1",
"ACTG1",
"ABO",
"ACVR1B",
"ADAM32",
"AFM",
"ADISSP",
"CA11",
"C8orf76",
"ARMH3",
"ASTL",
"ANGPTL7",
"AGMO",
"TAF15",
"AQP6",
"ADARB1",
"CLDN17",
"ANKRD52",
"AMY1B",
"GPN3",
"CYMP",
"CDK3",
"ACO2",
"ANKUB1",
"ACVR2B",
"ADAM6",
"ACSL3",
"ABHD17AP1",
"NAALADL2",
"CPNE6",
"ARID5B",
"SLC26A4",
"AMPD1",
"CLDN22",
"CLIC4",
"CEP72",
"ATXN7",
"AKR1E2",
"ABHD17A",
"ACSM4",
"PGBD5",
"ZNF445",
"ACKR3",
"ADAMTSL4",
"AP3D1",
"ARMH4",
"ABCG5",
"C8B",
"HCN1",
"ADAM21",
"FAM181A",
"ADGRG1",
"CMA1",
"ASB12",
"ALOX5AP",
"EDARADD",
"CASP12",
"AAMDC",
"DNAH7",
"BRD1",
"BPIFC",
"A1BG",
"AMPD2",
"ADAMTSL4-AS1",
"ATAD3B",
"AQP1",
"CCL3L3",
"ACOX2",
"AMD1",
"AMBN",
"BRF1",
"AGXT",
"ARL5C",
"AKAP1",
"CASP8AP2",
"ARAF",
"GPHB5",
"ADAMTS2",
"AKR1C4",
"C22orf15",
"HMBOX1",
"PRAMEF13",
"APOBEC3D",
"FAM118B",
"MIR651",
"AMPD3",
"DPH7",
"ACOT13",
"CC2D2A",
"CAPN7",
"HPGDS",
"CALHM6",
"FAM110D",
"ATG4B",
"ARL13A",
"CRTAM",
"ELL3",
"BEAN1",
"TMPRSS11F",
"FERD3L",
"OPN1MW",
"ATP2A3",
"AQP7P2",
"ADPRS",
"ALOX5",
"ACAP1",
"RIC1",
"CLEC1A",
"AGTRAP",
"ASGR2",
"ACVR2A",
"COLEC12",
"HOXD8",
"NCR1",
"GSTM5",
"RNLS",
"ATP6V1B1",
"ANKRD37",
"DNAH9",
"ALDOC",
"CPEB1",
"STON1",
"ELAPOR2",
"BAX",
"NOSTRIN",
"EYA4",
"ACOT1",
"CFAP276",
"ADAMTS1",
"ANKRD34C",
"GYS2",
"CDCP1",
"LINC00523",
"GPLD1",
"ATP13A1",
"CHMP1B",
"PKD1L2",
"AKAP11",
"ATRN",
"AP2B1",
"ADCK1",
"CD300LD",
"ADAMTS12",
"APOL2",
"SON",
"C20orf204",
"PDIA3P1",
"AURKAP1",
"NOTUM",
"GGT1",
"RASAL2",
"MRGPRX2",
"ANXA1",
"FAM174B",
"BCLAF1",
"ALKBH2",
"C20orf96",
"AOX1",
"ADAP1",
"DOK6",
"SCARNA7",
"IL20",
"ASTN1",
"GRIP2",
"ASB17",
"MIR1238",
"FAM90A11",
"ASCC1",
"ATP2A1",
"C5orf46",
"ADCY3",
"ADNP",
"COMTD1",
"APOBEC3G",
"OR2B2",
"EAPP",
"ATXN2L",
"ANKRD13C-DT",
"AKR7A3",
"ABCC11",
"CCL3L1",
"ARPC3",
"BARHL1",
"CAMSAP3",
"APH1B",
"PIK3C2B",
"ANAPC5",
"SNORD105",
"SNORA5B",
"RBM19",
"PAIP2B",
"AGBL2",
"KRTAP6-3",
"AFAP1L1",
"ZNF8",
"GPR180",
"BCKDK",
"SLC39A5",
"TRIM46",
"ARCN1",
"NCAPH",
"FEZ1",
"RARRES1",
"MMP23A",
"ATP11C",
"ANKS3",
"C10orf120",
"ZNF396",
"PSPC1",
"C17orf67",
"BIRC6",
"SERPINA6",
"TNFRSF6B"
],
"Coefficient": [
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-0.019432880464825983,
0.017968578505618324,
-0.01793482784318514,
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0.017682228497044292,
-0.01740334369101399,
0.017124678196116475,
-0.016612423034719218,
0.01651369081163283,
0.016448914140149578,
-0.015677138225195182,
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0.014937535199162681,
-0.01485751846925645,
0.014582894711428646,
0.01438735952966369,
0.014299126572158713,
-0.013974543018705746,
-0.0134743624380601,
-0.013455119619503703,
-0.013245843540984221,
0.012913817655591178,
-0.012891064189618962,
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-0.012218113515022935,
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-0.01114787812504753,
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-0.010485775134412293,
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-7.713322398588038e-05,
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1.652602449883662e-06,
-7.761884441188192e-07,
6.905934399486555e-08
],
"Absolute Coefficient": [
0.05309119923925017,
0.05191886347522421,
0.04321068891481557,
0.04199080248042255,
0.034725853295098356,
0.03179363101233131,
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7.761884441188192e-07,
6.905934399486555e-08
]
},
"cv_performance": {
"prediction": {
"accuracy": 87.14285714285714,
"precision": 88.50699300699301,
"recall": 93.55555555555556,
"f1": 90.71820728291316
},
"selection": {
"precision": 1.1261582980448896,
"recall": 1.286549707602339,
"f1": 1.1997074328356554,
"jaccard": 0.6065049320181284
}
}
}