GenoTEX / p3 /regress /Anxiety_disorder /significant_genes_condition_Insomnia.json
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{
"significant_genes": {
"Variable": [
"MAP2K1",
"NRBF2",
"FIS1",
"ECI2",
"NINJ1",
"WBP1",
"GSDMB",
"DDX39A",
"EPRS1",
"SDHAP2",
"NDUFA8",
"SZRD1",
"ITGB7",
"MEF2D",
"VPS8",
"TRAPPC11",
"APBA3",
"ARHGAP45",
"COQ10A",
"YWHAG",
"WHR1",
"CD8A",
"PGLS",
"EIF4E3",
"CEACAM1",
"AHSA2P",
"TRIM56",
"MME",
"RSL1D1",
"PXN",
"BSCL2",
"MAP3K11",
"LMO2",
"RILPL2",
"PI3",
"LEPROT",
"XKR8",
"NCOA6",
"NOP58",
"SNN",
"MOB3C",
"NME2",
"CCR1",
"DENND10",
"SNRPB2",
"CHKB",
"TXNDC5",
"RPL22",
"CAMP",
"SIAH1",
"STAG2",
"VWCE",
"AKAP13",
"ICA1",
"GSTM1",
"ATP5F1C",
"CFD",
"EML4",
"DENND2D",
"FRMD8",
"ZFP36L1",
"DHRS1",
"KPNA1",
"PNPLA6",
"RPS26P11",
"PRICKLE4",
"CAVIN2",
"RASSF1",
"DEGS1",
"STAG3L3",
"CHST7",
"FCRL3",
"PHB2",
"SCFD1",
"GSTM2",
"HAVCR2",
"RNASE2",
"NIPA2",
"RNF20",
"MYO9B",
"TBC1D2B",
"ERH",
"DENND6B",
"SULF2",
"NUDT1",
"OSBP",
"NRROS",
"CPSF3",
"CXCR4",
"ANAPC13",
"ZNF483",
"ZNF577",
"LILRA3",
"PAM",
"NELL2",
"ITPKB",
"TFG",
"H2BC21",
"COPS5",
"ITPR3",
"GMPR",
"PRAM1",
"S100P",
"SHMT2",
"IRF8",
"RFXANK",
"TMEM181",
"GFOD1",
"SNRNP40",
"LHPP",
"SPI1",
"HLA-G",
"PPP3R1",
"FN3KRP",
"RPS4Y1",
"IGBP1",
"SLC31A2",
"LILRB2",
"COLGALT1",
"TMA7",
"IL18RAP",
"PPP1CB",
"THAP11",
"VTI1B",
"HBG2",
"RPL23AP7",
"LPP",
"CIAO2A",
"SS18",
"CRISPLD2",
"LSM7",
"RPS26",
"CTSZ",
"FAM217B",
"MT1A",
"UNC45A",
"TRIM22",
"PPFIA1",
"ST13P4",
"KLRG1",
"DEFA1",
"PECAM1",
"HERC5",
"HLA-C",
"CISD1",
"C1QBP",
"TSSC4",
"PI4KAP2",
"RHBDL2",
"MBTD1",
"ACAA1",
"UBE2J1",
"GPR162",
"RAD21",
"INTS4",
"CLEC12A",
"IFITM3",
"DNAJA2",
"BHLHE40",
"E2F2",
"CCDC6",
"RPL9",
"IL1RN",
"CYP27A1",
"PAG1",
"WRAP73",
"OAZ2",
"VASP",
"ERICH1",
"PDZK1IP1",
"FPR1",
"UPK3BL1",
"RNA5S9",
"HDAC2",
"PLIN2",
"S100A12",
"WLS",
"FAM107B",
"EPSTI1",
"ZNF148",
"CLINT1",
"CD3E",
"NAAA",
"MIS12",
"CSNK2A1",
"H2AC18",
"H2AJ",
"POLR2C",
"SIGLEC10",
"SLC39A3",
"NSMAF",
"GAS7",
"GZMH",
"INF2",
"DERL1",
"HARS2",
"TNFAIP6",
"POLR3GL",
"GZMK",
"HLA-DRB4"
],
"Coefficient": [
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-3.2596871777524488,
3.2297184539267425,
-3.1429242986926305,
3.1202010381708205,
-3.1093357505200463,
3.051075337885788,
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],
"Absolute Coefficient": [
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8.861514914027023,
7.857110705771189,
6.894324375736104,
6.140469581913669,
5.804693684759516,
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]
},
"cv_performance": {
"prediction": {
"accuracy": 44.12698412698412,
"precision": 32.46461244716933,
"recall": 61.638146167557935,
"f1": 41.190684654099286
},
"selection": {
"precision": 0.22410546139359697,
"recall": 20.0,
"f1": 0.44324390693105775,
"jaccard": 0.22285678813085852
}
}
}