GenoTEX / p3 /regress /Celiac_Disease /significant_genes_condition_Crohns_Disease.json
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{
"significant_genes": {
"Variable": [
"HLA-E",
"INTS10",
"TGDS",
"PKIB",
"OR2M1P",
"TIMP2",
"SERPINE2",
"BLM",
"DEFB119",
"TBX10",
"SNORD110",
"TUSC3",
"UBASH3A",
"ATAD2",
"FAM216A",
"CYP4Z1",
"CHRM4",
"TRIM40",
"SAMD4A",
"MIR493",
"SNORD91A",
"ABCA2",
"CD96",
"PLEKHS1",
"SKAP1",
"HDAC10",
"TNFRSF10B",
"PRR15L",
"LRRIQ1",
"CABLES1",
"MMEL1",
"ELFN1",
"BCS1L",
"SLC8A2",
"DEFB134",
"LYPD2",
"QKI",
"SAMSN1",
"TEX44",
"CREG1",
"UBL3",
"SNORA36B"
],
"Coefficient": [
0.14609909617168546,
0.059592393645562854,
-0.04276520399579544,
-0.042475539977127025,
0.0394749236949185,
-0.03396217143751387,
-0.033951531878819795,
0.02960635813454059,
0.026518930301483067,
0.022748452202735362,
0.02219442893775257,
-0.021886917951459844,
0.018412228020859168,
0.015884662939028713,
0.014545272292631457,
-0.014106855881827474,
0.013743915355852135,
0.013507626793750551,
-0.013358156365637483,
0.012943517953711686,
0.011947942843113468,
-0.011859578229394015,
0.010727922320008293,
0.00972953869859113,
0.009523304558620821,
-0.008707301819341524,
0.008302016798911752,
-0.007597788467917665,
-0.006612622950995385,
-0.005654077033837644,
-0.005626996762179727,
0.004825416965274489,
0.004388116248081639,
0.004308915206481472,
0.004204124667860758,
0.004029677134873559,
-0.00326134717507891,
0.0023327763069586963,
-0.002205585985932475,
-0.0020390094978932536,
-0.001964446913578203,
-0.0009082205617608915
],
"Absolute Coefficient": [
0.14609909617168546,
0.059592393645562854,
0.04276520399579544,
0.042475539977127025,
0.0394749236949185,
0.03396217143751387,
0.033951531878819795,
0.02960635813454059,
0.026518930301483067,
0.022748452202735362,
0.02219442893775257,
0.021886917951459844,
0.018412228020859168,
0.015884662939028713,
0.014545272292631457,
0.014106855881827474,
0.013743915355852135,
0.013507626793750551,
0.013358156365637483,
0.012943517953711686,
0.011947942843113468,
0.011859578229394015,
0.010727922320008293,
0.00972953869859113,
0.009523304558620821,
0.008707301819341524,
0.008302016798911752,
0.007597788467917665,
0.006612622950995385,
0.005654077033837644,
0.005626996762179727,
0.004825416965274489,
0.004388116248081639,
0.004308915206481472,
0.004204124667860758,
0.004029677134873559,
0.00326134717507891,
0.0023327763069586963,
0.002205585985932475,
0.0020390094978932536,
0.001964446913578203,
0.0009082205617608915
]
},
"cv_performance": {
"prediction": {
"accuracy": 100.0,
"precision": 100.0,
"recall": 100.0,
"f1": 100.0
},
"selection": {
"precision": 1.6408668730650153,
"recall": 0.7792207792207793,
"f1": 1.0560125342734037,
"jaccard": 0.5358004827031376
}
}
}