GenoTEX / p3 /regress /Celiac_Disease /significant_genes_condition_Obesity.json
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{
"significant_genes": {
"Variable": [
"HLA-E",
"ATAD2",
"BCS1L",
"SERPINE2",
"BLM",
"LRRIQ1",
"BTN3A1",
"B2M",
"CNGA1",
"PCCB",
"GSDME",
"MIR640",
"BBS12",
"AOAH",
"ARID3A",
"ADM2",
"TIMP2",
"APCS",
"MEPE",
"C11orf40",
"NBPF11",
"ARHGEF3",
"EGR3",
"EPB41L1",
"INA",
"NCMAP",
"MIR493",
"CAPSL",
"MIR1911",
"CD40",
"BCAS4",
"AIMP1",
"ANXA13",
"ATXN7L2",
"LEMD1",
"INTS10",
"EXOSC7",
"AMDHD2",
"OR2M1P",
"TLL2",
"BTLA",
"RHO",
"CTLA4",
"SLC9A5",
"CDO1",
"TH",
"BMP1",
"UPK3B",
"C3orf70",
"TTYH3",
"LCE1D",
"FCRL5",
"BIRC3",
"FOXRED1",
"PTPRQ",
"DNAH3",
"CDC6",
"CD3D",
"PLEKHG1",
"IL17D",
"CENPU",
"RBM24",
"GNG10",
"CDH22",
"CAMK2N1",
"CD3G",
"CIMIP5",
"DEFB134",
"FAM133A",
"FRMD1",
"TMEM198",
"PKD2L1",
"TDRG1",
"OR5D13",
"ERBB4",
"HCST",
"RPS16",
"CD226"
],
"Coefficient": [
0.10572912622738224,
0.06519087126616432,
0.061109631875010804,
-0.044598069678849675,
0.04234061839037603,
-0.03270285139105366,
0.03239327238339102,
0.02807911749258508,
-0.025559058433303056,
0.021342463588792982,
-0.018633231502767137,
0.016641619980699435,
-0.016145568993506467,
0.01601371660540446,
-0.014879550100561858,
-0.014551213035935234,
-0.013583089414937612,
0.013530833633135791,
0.01320111400012622,
-0.013185236570352253,
0.012990898217062742,
0.01242122887612813,
0.012225438919218116,
-0.011069784975423835,
0.010867459773693874,
-0.010627401937348069,
0.007736784130083972,
-0.007007757674695425,
0.006722500273009083,
0.006713332814979597,
0.006493922022899412,
0.00563245689165318,
-0.005572433616744309,
0.005549428014470686,
-0.0055022369920938565,
0.00528911842162802,
0.005182679901372714,
-0.005175237042868308,
0.0050484898285908806,
0.004570613141945388,
0.004265686121967145,
0.004148854705059888,
0.0034446429320323635,
-0.00330586397901557,
0.0029395680885514327,
0.0024637100635208136,
-0.001987956893430767,
-0.0019667418992827075,
-0.001929306810464451,
-0.001893803380456672,
0.0017768914118331638,
0.0017025799376250623,
0.001606763662872238,
0.0013308013081854994,
-0.0012140993740869387,
0.0011449994702712367,
0.0009986551153781087,
0.0008678616689269192,
0.0008530026034387936,
-0.0006747440450930877,
0.000610587504796934,
-0.0005407668630499898,
-0.0005238823949722359,
0.0005034813663590208,
-0.00040004753100093376,
0.00038760402177091666,
0.00027502735157092727,
0.00023034441256811571,
-0.00022817805923581175,
-0.00017209390201673407,
-0.00015976060352224542,
6.0687840489798524e-05,
-1.9307791074704532e-05,
6.743342791408999e-06,
5.887066560041614e-06,
4.728467221932291e-06,
2.8825007635355864e-06,
2.2805095645351465e-06
],
"Absolute Coefficient": [
0.10572912622738224,
0.06519087126616432,
0.061109631875010804,
0.044598069678849675,
0.04234061839037603,
0.03270285139105366,
0.03239327238339102,
0.02807911749258508,
0.025559058433303056,
0.021342463588792982,
0.018633231502767137,
0.016641619980699435,
0.016145568993506467,
0.01601371660540446,
0.014879550100561858,
0.014551213035935234,
0.013583089414937612,
0.013530833633135791,
0.01320111400012622,
0.013185236570352253,
0.012990898217062742,
0.01242122887612813,
0.012225438919218116,
0.011069784975423835,
0.010867459773693874,
0.010627401937348069,
0.007736784130083972,
0.007007757674695425,
0.006722500273009083,
0.006713332814979597,
0.006493922022899412,
0.00563245689165318,
0.005572433616744309,
0.005549428014470686,
0.0055022369920938565,
0.00528911842162802,
0.005182679901372714,
0.005175237042868308,
0.0050484898285908806,
0.004570613141945388,
0.004265686121967145,
0.004148854705059888,
0.0034446429320323635,
0.00330586397901557,
0.0029395680885514327,
0.0024637100635208136,
0.001987956893430767,
0.0019667418992827075,
0.001929306810464451,
0.001893803380456672,
0.0017768914118331638,
0.0017025799376250623,
0.001606763662872238,
0.0013308013081854994,
0.0012140993740869387,
0.0011449994702712367,
0.0009986551153781087,
0.0008678616689269192,
0.0008530026034387936,
0.0006747440450930877,
0.000610587504796934,
0.0005407668630499898,
0.0005238823949722359,
0.0005034813663590208,
0.00040004753100093376,
0.00038760402177091666,
0.00027502735157092727,
0.00023034441256811571,
0.00022817805923581175,
0.00017209390201673407,
0.00015976060352224542,
6.0687840489798524e-05,
1.9307791074704532e-05,
6.743342791408999e-06,
5.887066560041614e-06,
4.728467221932291e-06,
2.8825007635355864e-06,
2.2805095645351465e-06
]
},
"cv_performance": {
"prediction": {
"accuracy": 97.77777777777779,
"precision": 100.0,
"recall": 97.14285714285714,
"f1": 98.46153846153847
},
"selection": {
"precision": 1.012079378774806,
"recall": 0.7792207792207793,
"f1": 0.8803333380700433,
"jaccard": 0.4434201648388898
}
}
}