GenoTEX / p3 /regress /Celiac_Disease /significant_genes_condition_Psoriasis.json
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{
"significant_genes": {
"Variable": [
"ATAD2",
"HLA-E",
"BTN3A1",
"BLM",
"B2M",
"GSDME",
"LRRIQ1",
"SERPINE2",
"BCS1L",
"ARID3A",
"BBS12",
"ABCA2",
"INTS10",
"C11orf40",
"TIMP2",
"APOBEC3G",
"CNGA1",
"APCS",
"ATAD5",
"PCCB",
"ADM2",
"GNG10",
"OR2M1P",
"PLEKHG1",
"ANXA13",
"ADAM8",
"CAPSL",
"C5orf15",
"NBPF11",
"EXOSC7",
"AMDHD2",
"ARHGEF3",
"EPB41L1",
"RHO",
"INA",
"MEPE",
"SLC8A2",
"HLA-G",
"CLDN16",
"SLC9A5",
"MYLK3",
"SLC4A3",
"RBM24",
"EGR3",
"LEMD1",
"MIR493",
"HCLS1",
"BTLA",
"AP3M2",
"BCAS4",
"NCMAP",
"ARMCX5-GPRASP2",
"ASNS",
"OSBP2",
"FCAMR",
"TH",
"DEFB134",
"GRAP",
"PRR19",
"TSPAN5",
"CDO1",
"MIR640",
"AOAH",
"HPCAL1",
"ATXN7L2",
"ZSCAN5B",
"PACC1",
"TLL2",
"CDC6",
"LINC00235",
"TRIM40",
"SLC6A16",
"BIRC3",
"TTYH3",
"FAM133A"
],
"Coefficient": [
0.08079994618802377,
0.07010533128129737,
0.04189638835835617,
0.04177835304401021,
0.039225295483362045,
-0.03477788835809572,
-0.03029692370230332,
-0.029998795734600046,
0.029297193125432424,
-0.028035332275493926,
-0.0230807689183659,
-0.022047618592227213,
0.019481689478601974,
-0.019229514516264434,
-0.019113569639883466,
0.018738824542033027,
-0.016787777973556562,
0.01594270058017507,
-0.015623966411489868,
0.014714298821187917,
-0.014479113044197725,
-0.013401109148115167,
0.012867522795955412,
0.010664544454989041,
-0.010277681123158923,
0.01002557788526905,
-0.009215790140072755,
0.009027843505984108,
0.008446176148098413,
0.008190127838271105,
-0.0069247857785753025,
0.006385307280272167,
-0.005699216202465925,
0.005404074974348387,
0.004675420886663256,
0.004316047755902084,
0.00410927754968684,
0.003957658961134372,
0.0037402021212147086,
-0.0035862983901091758,
-0.0025430452849645197,
0.002528447414547487,
-0.0023443150289348346,
0.002335148273144485,
-0.0023046646519087172,
0.0022795168268882394,
0.0021327440505997195,
0.0019119841292690347,
0.0018886556708415337,
0.0018012545900268169,
-0.0017449321296660854,
-0.0017395165729091092,
0.0017012257491509882,
-0.0016451028154199029,
0.0015702121338966783,
0.0012449511679739178,
0.0011869856827692014,
0.0011636628714584074,
-0.0010806512702536506,
0.0010482991414354275,
0.0010423348731313533,
0.0008455356891106944,
0.000711320434860934,
-0.0005030863235067533,
0.00037862144125586035,
-0.00036051510349544334,
0.00027988032353169187,
0.00020870814818405923,
0.00014763486571797046,
-0.0001450101067682019,
0.00011165010854675304,
0.0001074170824261492,
4.83306420645486e-05,
-4.036566459139722e-05,
-1.4469564105759093e-05
],
"Absolute Coefficient": [
0.08079994618802377,
0.07010533128129737,
0.04189638835835617,
0.04177835304401021,
0.039225295483362045,
0.03477788835809572,
0.03029692370230332,
0.029998795734600046,
0.029297193125432424,
0.028035332275493926,
0.0230807689183659,
0.022047618592227213,
0.019481689478601974,
0.019229514516264434,
0.019113569639883466,
0.018738824542033027,
0.016787777973556562,
0.01594270058017507,
0.015623966411489868,
0.014714298821187917,
0.014479113044197725,
0.013401109148115167,
0.012867522795955412,
0.010664544454989041,
0.010277681123158923,
0.01002557788526905,
0.009215790140072755,
0.009027843505984108,
0.008446176148098413,
0.008190127838271105,
0.0069247857785753025,
0.006385307280272167,
0.005699216202465925,
0.005404074974348387,
0.004675420886663256,
0.004316047755902084,
0.00410927754968684,
0.003957658961134372,
0.0037402021212147086,
0.0035862983901091758,
0.0025430452849645197,
0.002528447414547487,
0.0023443150289348346,
0.002335148273144485,
0.0023046646519087172,
0.0022795168268882394,
0.0021327440505997195,
0.0019119841292690347,
0.0018886556708415337,
0.0018012545900268169,
0.0017449321296660854,
0.0017395165729091092,
0.0017012257491509882,
0.0016451028154199029,
0.0015702121338966783,
0.0012449511679739178,
0.0011869856827692014,
0.0011636628714584074,
0.0010806512702536506,
0.0010482991414354275,
0.0010423348731313533,
0.0008455356891106944,
0.000711320434860934,
0.0005030863235067533,
0.00037862144125586035,
0.00036051510349544334,
0.00027988032353169187,
0.00020870814818405923,
0.00014763486571797046,
0.0001450101067682019,
0.00011165010854675304,
0.0001074170824261492,
4.83306420645486e-05,
4.036566459139722e-05,
1.4469564105759093e-05
]
},
"cv_performance": {
"prediction": {
"accuracy": 100.0,
"precision": 100.0,
"recall": 100.0,
"f1": 100.0
},
"selection": {
"precision": 0.9639830508474576,
"recall": 0.7792207792207793,
"f1": 0.8614935335836462,
"jaccard": 0.43591793232081005
}
}
}