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- .gitattributes +82 -0
- output/preprocess/Epilepsy/TCGA.csv +3 -0
- output/preprocess/Epilepsy/gene_data/TCGA.csv +3 -0
- output/preprocess/Epilepsy/gene_data/TCGA_original.csv +3 -0
- output/preprocess/Gastroesophageal_reflux_disease_(GERD)/TCGA.csv +3 -0
- output/preprocess/Gastroesophageal_reflux_disease_(GERD)/gene_data/TCGA.csv +3 -0
- output/preprocess/Gaucher_Disease/TCGA.csv +3 -0
- output/preprocess/Gaucher_Disease/gene_data/TCGA.csv +3 -0
- output/preprocess/HIV_Resistance/GSE33580.csv +3 -0
- output/preprocess/HIV_Resistance/GSE46599.csv +0 -0
- output/preprocess/HIV_Resistance/clinical_data/GSE117748.csv +2 -0
- output/preprocess/HIV_Resistance/clinical_data/GSE33580.csv +2 -0
- output/preprocess/HIV_Resistance/clinical_data/GSE46599.csv +2 -0
- output/preprocess/HIV_Resistance/clinical_data/TCGA.csv +49 -0
- output/preprocess/HIV_Resistance/cohort_info.json +42 -0
- output/preprocess/HIV_Resistance/gene_data/GSE117748.csv +0 -0
- output/preprocess/HIV_Resistance/gene_data/GSE33580.csv +3 -0
- output/preprocess/HIV_Resistance/gene_data/GSE46599.csv +3 -0
- output/preprocess/HIV_Resistance/gene_data/TCGA.csv +3 -0
- output/preprocess/Head_and_Neck_Cancer/gene_data/GSE156915.csv +3 -0
- output/preprocess/Head_and_Neck_Cancer/gene_data/GSE244580.csv +3 -0
- output/preprocess/Heart_rate/GSE18583.csv +3 -0
- output/preprocess/Heart_rate/GSE236927.csv +3 -0
- output/preprocess/Heart_rate/GSE35661.csv +0 -0
- output/preprocess/Heart_rate/clinical_data/GSE18583.csv +42 -0
- output/preprocess/Heart_rate/clinical_data/GSE236927.csv +96 -0
- output/preprocess/Heart_rate/clinical_data/GSE34788.csv +121 -0
- output/preprocess/Heart_rate/clinical_data/GSE35661.csv +42 -0
- output/preprocess/Heart_rate/clinical_data/GSE72462.csv +2 -0
- output/preprocess/Heart_rate/clinical_data/TCGA.csv +93 -0
- output/preprocess/Heart_rate/gene_data/GSE117070.csv +3 -0
- output/preprocess/Heart_rate/gene_data/GSE12385.csv +0 -0
- output/preprocess/Heart_rate/gene_data/GSE18583.csv +3 -0
- output/preprocess/Heart_rate/gene_data/GSE236927.csv +3 -0
- output/preprocess/Heart_rate/gene_data/GSE34788.csv +1 -0
- output/preprocess/Heart_rate/gene_data/GSE35661.csv +0 -0
- output/preprocess/Heart_rate/gene_data/GSE72462.csv +5 -0
- output/preprocess/Heart_rate/gene_data/TCGA.csv +3 -0
- output/preprocess/Height/GSE71994.csv +3 -0
- output/preprocess/Height/clinical_data/GSE101709.csv +99 -0
- output/preprocess/Height/clinical_data/GSE101710.csv +80 -0
- output/preprocess/Height/clinical_data/GSE106800.csv +48 -0
- output/preprocess/Height/clinical_data/GSE117525.csv +4 -0
- output/preprocess/Height/clinical_data/GSE152073.csv +91 -0
- output/preprocess/Height/clinical_data/GSE71994.csv +4 -0
- output/preprocess/Height/clinical_data/GSE97475.csv +159 -0
- output/preprocess/Height/clinical_data/TCGA.csv +272 -0
- output/preprocess/Height/cohort_info.json +102 -0
- output/preprocess/Height/gene_data/GSE101709.csv +3 -0
- output/preprocess/Height/gene_data/GSE101710.csv +1 -0
.gitattributes
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output/preprocess/Epilepsy/TCGA.csv filter=lfs diff=lfs merge=lfs -text
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output/preprocess/HIV_Resistance/gene_data/TCGA.csv filter=lfs diff=lfs merge=lfs -text
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output/preprocess/Epilepsy/TCGA.csv
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HIV_Resistance,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0
|
output/preprocess/HIV_Resistance/clinical_data/GSE46599.csv
ADDED
@@ -0,0 +1,2 @@
|
|
|
|
|
|
|
1 |
+
,GSM1133032,GSM1133033,GSM1133034,GSM1133035,GSM1133036,GSM1133037,GSM1133038,GSM1133039,GSM1133040,GSM1133041,GSM1133042,GSM1133043,GSM1133044,GSM1133045,GSM1133046,GSM1133047,GSM1133048,GSM1133049,GSM1133050,GSM1133051,GSM1133052,GSM1133053,GSM1133054,GSM1133055,GSM1133056,GSM1133057,GSM1133058,GSM1133059,GSM1133060,GSM1133061,GSM1133062,GSM1133063,GSM1133064,GSM1133065,GSM1133066,GSM1133067,GSM1133068,GSM1133069,GSM1133070,GSM1133071,GSM1133072,GSM1133073,GSM1133074,GSM1133075,GSM1133076,GSM1133077,GSM1133078,GSM1133079
|
2 |
+
HIV_Resistance,0.0,0.0,,,0.0,0.0,,,0.0,0.0,,,0.0,0.0,,,1.0,1.0,,,0.0,0.0,,,1.0,1.0,1.0,,,,1.0,1.0,1.0,,,,1.0,1.0,,,1.0,1.0,,,0.0,0.0,,
|
output/preprocess/HIV_Resistance/clinical_data/TCGA.csv
ADDED
@@ -0,0 +1,49 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
1 |
+
sampleID,HIV_Resistance,Age,Gender
|
2 |
+
TCGA-FA-8693-01,1,75,1
|
3 |
+
TCGA-FA-A4BB-01,1,67,1
|
4 |
+
TCGA-FA-A4XK-01,1,40,1
|
5 |
+
TCGA-FA-A6HN-01,1,73,1
|
6 |
+
TCGA-FA-A6HO-01,1,58,0
|
7 |
+
TCGA-FA-A7DS-01,1,54,0
|
8 |
+
TCGA-FA-A7Q1-01,1,61,0
|
9 |
+
TCGA-FA-A82F-01,1,48,0
|
10 |
+
TCGA-FA-A86F-01,1,64,0
|
11 |
+
TCGA-FF-8041-01,1,28,0
|
12 |
+
TCGA-FF-8042-01,1,57,0
|
13 |
+
TCGA-FF-8043-01,1,70,0
|
14 |
+
TCGA-FF-8046-01,1,51,1
|
15 |
+
TCGA-FF-8047-01,1,38,0
|
16 |
+
TCGA-FF-8061-01,1,42,1
|
17 |
+
TCGA-FF-8062-01,1,60,0
|
18 |
+
TCGA-FF-A7CQ-01,1,74,1
|
19 |
+
TCGA-FF-A7CR-01,1,61,1
|
20 |
+
TCGA-FF-A7CW-01,1,72,1
|
21 |
+
TCGA-FF-A7CX-01,1,46,1
|
22 |
+
TCGA-FM-8000-01,1,70,0
|
23 |
+
TCGA-G8-6324-01,1,43,0
|
24 |
+
TCGA-G8-6325-01,1,69,1
|
25 |
+
TCGA-G8-6326-01,1,52,1
|
26 |
+
TCGA-G8-6906-01,1,58,1
|
27 |
+
TCGA-G8-6907-01,1,57,0
|
28 |
+
TCGA-G8-6909-01,1,67,1
|
29 |
+
TCGA-G8-6914-01,1,67,1
|
30 |
+
TCGA-GR-7351-01,1,56,0
|
31 |
+
TCGA-GR-7353-01,1,36,1
|
32 |
+
TCGA-GR-A4D4-01,1,57,0
|
33 |
+
TCGA-GR-A4D5-01,1,46,0
|
34 |
+
TCGA-GR-A4D6-01,1,54,0
|
35 |
+
TCGA-GR-A4D9-01,1,66,0
|
36 |
+
TCGA-GS-A9TQ-01,1,69,0
|
37 |
+
TCGA-GS-A9TT-01,1,70,1
|
38 |
+
TCGA-GS-A9TU-01,1,45,1
|
39 |
+
TCGA-GS-A9TV-01,1,40,0
|
40 |
+
TCGA-GS-A9TW-01,1,23,0
|
41 |
+
TCGA-GS-A9TX-01,1,37,1
|
42 |
+
TCGA-GS-A9TY-01,1,82,0
|
43 |
+
TCGA-GS-A9TZ-01,1,51,1
|
44 |
+
TCGA-GS-A9U3-01,1,77,0
|
45 |
+
TCGA-GS-A9U4-01,1,27,0
|
46 |
+
TCGA-RQ-A68N-01,1,63,1
|
47 |
+
TCGA-RQ-A6JB-01,1,62,0
|
48 |
+
TCGA-RQ-AAAT-01,1,63,0
|
49 |
+
TCGA-VB-A8QN-01,1,55,1
|
output/preprocess/HIV_Resistance/cohort_info.json
ADDED
@@ -0,0 +1,42 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
1 |
+
{
|
2 |
+
"GSE46599": {
|
3 |
+
"is_usable": true,
|
4 |
+
"is_gene_available": true,
|
5 |
+
"is_trait_available": true,
|
6 |
+
"is_available": true,
|
7 |
+
"is_biased": false,
|
8 |
+
"has_age": false,
|
9 |
+
"has_gender": false,
|
10 |
+
"sample_size": 24
|
11 |
+
},
|
12 |
+
"GSE33580": {
|
13 |
+
"is_usable": true,
|
14 |
+
"is_gene_available": true,
|
15 |
+
"is_trait_available": true,
|
16 |
+
"is_available": true,
|
17 |
+
"is_biased": false,
|
18 |
+
"has_age": false,
|
19 |
+
"has_gender": false,
|
20 |
+
"sample_size": 86
|
21 |
+
},
|
22 |
+
"GSE117748": {
|
23 |
+
"is_usable": false,
|
24 |
+
"is_gene_available": true,
|
25 |
+
"is_trait_available": true,
|
26 |
+
"is_available": true,
|
27 |
+
"is_biased": true,
|
28 |
+
"has_age": false,
|
29 |
+
"has_gender": false,
|
30 |
+
"sample_size": 15
|
31 |
+
},
|
32 |
+
"TCGA": {
|
33 |
+
"is_usable": false,
|
34 |
+
"is_gene_available": true,
|
35 |
+
"is_trait_available": true,
|
36 |
+
"is_available": true,
|
37 |
+
"is_biased": true,
|
38 |
+
"has_age": true,
|
39 |
+
"has_gender": true,
|
40 |
+
"sample_size": 48
|
41 |
+
}
|
42 |
+
}
|
output/preprocess/HIV_Resistance/gene_data/GSE117748.csv
ADDED
The diff for this file is too large to render.
See raw diff
|
|
output/preprocess/HIV_Resistance/gene_data/GSE33580.csv
ADDED
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
1 |
+
version https://git-lfs.github.com/spec/v1
|
2 |
+
oid sha256:0511021b61ee52077846f8a26d1b4a3aba0da36e320fd0c6c78e33e164c1ec19
|
3 |
+
size 17574551
|
output/preprocess/HIV_Resistance/gene_data/GSE46599.csv
ADDED
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
1 |
+
version https://git-lfs.github.com/spec/v1
|
2 |
+
oid sha256:1f661e1f9ecddf85031728eb9eb0b8d5e16c1ec259db88715274af7b864f73f0
|
3 |
+
size 11404720
|
output/preprocess/HIV_Resistance/gene_data/TCGA.csv
ADDED
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
1 |
+
version https://git-lfs.github.com/spec/v1
|
2 |
+
oid sha256:fd78ceeef849634fb206bbb2dacb06f0b62ea491a74968c985fbe8e5416243ef
|
3 |
+
size 14452558
|
output/preprocess/Head_and_Neck_Cancer/gene_data/GSE156915.csv
ADDED
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
1 |
+
version https://git-lfs.github.com/spec/v1
|
2 |
+
oid sha256:2879a4bafeabb89373f8e8048fc81105fb8bf2230ea6cf71844e326693130272
|
3 |
+
size 95359844
|
output/preprocess/Head_and_Neck_Cancer/gene_data/GSE244580.csv
ADDED
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
1 |
+
version https://git-lfs.github.com/spec/v1
|
2 |
+
oid sha256:191700b40cf9682312d56fe992ccb8e4fec988ca99531fc97814a21c696c7393
|
3 |
+
size 15010353
|
output/preprocess/Heart_rate/GSE18583.csv
ADDED
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
1 |
+
version https://git-lfs.github.com/spec/v1
|
2 |
+
oid sha256:fa5f0f306a70952b04627e932e52c744f976b0db704e82df3932c015cdf15654
|
3 |
+
size 48760464
|
output/preprocess/Heart_rate/GSE236927.csv
ADDED
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
1 |
+
version https://git-lfs.github.com/spec/v1
|
2 |
+
oid sha256:6145d99d0ad6542ab7cdb51e616d729581e5fc0d49e13641b9e5135bf92598be
|
3 |
+
size 11974359
|
output/preprocess/Heart_rate/GSE35661.csv
ADDED
The diff for this file is too large to render.
See raw diff
|
|
output/preprocess/Heart_rate/clinical_data/GSE18583.csv
ADDED
@@ -0,0 +1,42 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
1 |
+
Sample,Heart_rate,Gender
|
2 |
+
GSM462215,173.0,1.0
|
3 |
+
GSM462216,155.0,1.0
|
4 |
+
GSM462217,183.0,1.0
|
5 |
+
GSM462218,149.0,1.0
|
6 |
+
GSM462219,146.0,1.0
|
7 |
+
GSM462220,157.0,1.0
|
8 |
+
GSM462221,162.0,1.0
|
9 |
+
GSM462222,170.0,1.0
|
10 |
+
GSM462223,165.0,1.0
|
11 |
+
GSM462224,144.0,1.0
|
12 |
+
GSM462225,167.0,1.0
|
13 |
+
GSM462226,165.0,1.0
|
14 |
+
GSM462227,191.0,1.0
|
15 |
+
GSM462228,149.0,1.0
|
16 |
+
GSM462229,160.0,1.0
|
17 |
+
GSM462230,177.0,1.0
|
18 |
+
GSM462231,174.0,1.0
|
19 |
+
GSM462232,165.0,1.0
|
20 |
+
GSM462233,173.0,1.0
|
21 |
+
GSM462234,190.0,1.0
|
22 |
+
GSM462235,190.0,1.0
|
23 |
+
GSM462236,190.0,1.0
|
24 |
+
GSM462237,169.0,1.0
|
25 |
+
GSM462238,160.0,1.0
|
26 |
+
GSM462239,,1.0
|
27 |
+
GSM462240,,1.0
|
28 |
+
GSM462241,,1.0
|
29 |
+
GSM462242,,1.0
|
30 |
+
GSM462243,,1.0
|
31 |
+
GSM462244,,1.0
|
32 |
+
GSM462245,,1.0
|
33 |
+
GSM462246,,1.0
|
34 |
+
GSM462247,,1.0
|
35 |
+
GSM462248,,1.0
|
36 |
+
GSM462249,,1.0
|
37 |
+
GSM462250,,1.0
|
38 |
+
GSM462251,,1.0
|
39 |
+
GSM462252,,1.0
|
40 |
+
GSM462253,,1.0
|
41 |
+
GSM462254,,1.0
|
42 |
+
GSM462255,,1.0
|
output/preprocess/Heart_rate/clinical_data/GSE236927.csv
ADDED
@@ -0,0 +1,96 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
1 |
+
Sample,Heart_rate,Gender
|
2 |
+
GSM7585856,36.2,1.0
|
3 |
+
GSM7585857,23.0,1.0
|
4 |
+
GSM7585858,36.6,1.0
|
5 |
+
GSM7585859,22.8,1.0
|
6 |
+
GSM7585860,30.0,1.0
|
7 |
+
GSM7585861,25.5,1.0
|
8 |
+
GSM7585862,19.0,1.0
|
9 |
+
GSM7585863,88.0,
|
10 |
+
GSM7585864,82.0,
|
11 |
+
GSM7585865,83.0,
|
12 |
+
GSM7585866,87.0,
|
13 |
+
GSM7585867,76.0,
|
14 |
+
GSM7585868,77.0,
|
15 |
+
GSM7585869,77.0,
|
16 |
+
GSM7585870,76.0,
|
17 |
+
GSM7585871,73.0,
|
18 |
+
GSM7585872,85.0,
|
19 |
+
GSM7585873,91.0,
|
20 |
+
GSM7585874,74.0,
|
21 |
+
GSM7585875,79.0,
|
22 |
+
GSM7585876,83.0,
|
23 |
+
GSM7585877,80.0,
|
24 |
+
GSM7585878,82.0,
|
25 |
+
GSM7585879,80.0,
|
26 |
+
GSM7585880,87.0,
|
27 |
+
GSM7585881,74.0,
|
28 |
+
GSM7585882,75.0,
|
29 |
+
GSM7585883,79.0,
|
30 |
+
GSM7585884,73.0,
|
31 |
+
GSM7585885,82.0,
|
32 |
+
GSM7585886,74.0,
|
33 |
+
GSM7585887,81.0,
|
34 |
+
GSM7585888,90.0,
|
35 |
+
GSM7585889,73.0,
|
36 |
+
GSM7585890,74.0,
|
37 |
+
GSM7585891,87.0,
|
38 |
+
GSM7585892,70.0,
|
39 |
+
GSM7585893,70.0,
|
40 |
+
GSM7585894,74.0,
|
41 |
+
GSM7585895,74.0,
|
42 |
+
GSM7585896,73.0,
|
43 |
+
GSM7585897,74.0,
|
44 |
+
GSM7585898,85.0,
|
45 |
+
GSM7585899,74.0,
|
46 |
+
GSM7585900,75.0,
|
47 |
+
GSM7585901,83.0,
|
48 |
+
GSM7585902,73.0,
|
49 |
+
GSM7585903,71.0,
|
50 |
+
GSM7585904,80.0,
|
51 |
+
GSM7585905,74.0,
|
52 |
+
GSM7585906,80.0,
|
53 |
+
GSM7585907,71.0,
|
54 |
+
GSM7585908,84.0,
|
55 |
+
GSM7585909,73.0,
|
56 |
+
GSM7585910,74.0,
|
57 |
+
GSM7585911,70.0,
|
58 |
+
GSM7585912,82.0,
|
59 |
+
GSM7585913,79.0,
|
60 |
+
GSM7585914,74.0,
|
61 |
+
GSM7585915,80.0,
|
62 |
+
GSM7585916,73.0,
|
63 |
+
GSM7585917,84.0,
|
64 |
+
GSM7585918,73.0,
|
65 |
+
GSM7585919,73.0,
|
66 |
+
GSM7585920,86.0,
|
67 |
+
GSM7585921,74.0,
|
68 |
+
GSM7585922,73.0,
|
69 |
+
GSM7585923,78.0,
|
70 |
+
GSM7585924,75.0,
|
71 |
+
GSM7585925,82.0,
|
72 |
+
GSM7585926,74.0,
|
73 |
+
GSM7585927,88.0,
|
74 |
+
GSM7585928,88.0,
|
75 |
+
GSM7585929,85.0,
|
76 |
+
GSM7585930,72.0,
|
77 |
+
GSM7585931,76.0,
|
78 |
+
GSM7585932,80.0,
|
79 |
+
GSM7585933,81.0,
|
80 |
+
GSM7585934,79.0,
|
81 |
+
GSM7585935,79.0,
|
82 |
+
GSM7585936,73.0,
|
83 |
+
GSM7585937,73.0,
|
84 |
+
GSM7585938,79.0,
|
85 |
+
GSM7585939,83.0,
|
86 |
+
GSM7585940,75.0,
|
87 |
+
GSM7585941,77.0,
|
88 |
+
GSM7585942,82.0,
|
89 |
+
GSM7585943,74.0,
|
90 |
+
GSM7585944,79.0,
|
91 |
+
GSM7585945,81.0,
|
92 |
+
GSM7585946,73.0,
|
93 |
+
GSM7585947,75.0,
|
94 |
+
GSM7585948,73.0,
|
95 |
+
GSM7585949,81.0,
|
96 |
+
GSM7585950,79.0,
|
output/preprocess/Heart_rate/clinical_data/GSE34788.csv
ADDED
@@ -0,0 +1,121 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
1 |
+
Sample,Heart_rate,Gender
|
2 |
+
GSM855302,,
|
3 |
+
GSM855303,,
|
4 |
+
GSM855304,,
|
5 |
+
GSM855305,,
|
6 |
+
GSM855306,,
|
7 |
+
GSM855307,,
|
8 |
+
GSM855308,,
|
9 |
+
GSM855309,,
|
10 |
+
GSM855310,,
|
11 |
+
GSM855311,,
|
12 |
+
GSM855312,,
|
13 |
+
GSM855313,,
|
14 |
+
GSM855314,,
|
15 |
+
GSM855315,,
|
16 |
+
GSM855316,,
|
17 |
+
GSM855317,,
|
18 |
+
GSM855318,,
|
19 |
+
GSM855319,,
|
20 |
+
GSM855320,,
|
21 |
+
GSM855321,,
|
22 |
+
GSM855322,,
|
23 |
+
GSM855323,,
|
24 |
+
GSM855324,,
|
25 |
+
GSM855325,,
|
26 |
+
GSM855326,,
|
27 |
+
GSM855327,,
|
28 |
+
GSM855328,,
|
29 |
+
GSM855329,,
|
30 |
+
GSM855330,,
|
31 |
+
GSM855331,,
|
32 |
+
GSM855332,,
|
33 |
+
GSM855333,,
|
34 |
+
GSM855334,,
|
35 |
+
GSM855335,,
|
36 |
+
GSM855336,,
|
37 |
+
GSM855337,,
|
38 |
+
GSM855338,,
|
39 |
+
GSM855339,,
|
40 |
+
GSM855340,,
|
41 |
+
GSM855341,,
|
42 |
+
GSM855342,,
|
43 |
+
GSM855343,,
|
44 |
+
GSM855344,,
|
45 |
+
GSM855345,,
|
46 |
+
GSM855346,,
|
47 |
+
GSM855347,,
|
48 |
+
GSM855348,,
|
49 |
+
GSM855349,,
|
50 |
+
GSM855350,,
|
51 |
+
GSM855351,,
|
52 |
+
GSM855352,,
|
53 |
+
GSM855353,,
|
54 |
+
GSM855354,,
|
55 |
+
GSM855355,,
|
56 |
+
GSM855356,,
|
57 |
+
GSM855357,,
|
58 |
+
GSM855358,,
|
59 |
+
GSM855359,,
|
60 |
+
GSM855360,,
|
61 |
+
GSM855361,,
|
62 |
+
GSM855362,,
|
63 |
+
GSM855363,,
|
64 |
+
GSM855364,,
|
65 |
+
GSM855365,,
|
66 |
+
GSM855366,,
|
67 |
+
GSM855367,,
|
68 |
+
GSM855368,,
|
69 |
+
GSM855369,,
|
70 |
+
GSM855370,,
|
71 |
+
GSM855371,,
|
72 |
+
GSM855372,,
|
73 |
+
GSM855373,,
|
74 |
+
GSM855374,,
|
75 |
+
GSM855375,,
|
76 |
+
GSM855376,,
|
77 |
+
GSM855377,,
|
78 |
+
GSM855378,,
|
79 |
+
GSM855379,,
|
80 |
+
GSM855380,,
|
81 |
+
GSM855381,,
|
82 |
+
GSM855382,,
|
83 |
+
GSM855383,,
|
84 |
+
GSM855384,,
|
85 |
+
GSM855385,,
|
86 |
+
GSM855386,,
|
87 |
+
GSM855387,,
|
88 |
+
GSM855388,,
|
89 |
+
GSM855389,,
|
90 |
+
GSM855390,,
|
91 |
+
GSM855391,,
|
92 |
+
GSM855392,,
|
93 |
+
GSM855393,,
|
94 |
+
GSM855394,,
|
95 |
+
GSM855395,,
|
96 |
+
GSM855396,,
|
97 |
+
GSM855397,,
|
98 |
+
GSM855398,,
|
99 |
+
GSM855399,,
|
100 |
+
GSM855400,,
|
101 |
+
GSM855401,,
|
102 |
+
GSM855402,,
|
103 |
+
GSM855403,,
|
104 |
+
GSM855404,,
|
105 |
+
GSM855405,,
|
106 |
+
GSM855406,,
|
107 |
+
GSM855407,,
|
108 |
+
GSM855408,,
|
109 |
+
GSM855409,,
|
110 |
+
GSM855410,,
|
111 |
+
GSM855411,,
|
112 |
+
GSM855412,,
|
113 |
+
GSM855413,,
|
114 |
+
GSM855414,,
|
115 |
+
GSM855415,,
|
116 |
+
GSM855416,,
|
117 |
+
GSM855417,,
|
118 |
+
GSM855418,,
|
119 |
+
GSM855419,,
|
120 |
+
GSM855420,,
|
121 |
+
GSM855421,,
|
output/preprocess/Heart_rate/clinical_data/GSE35661.csv
ADDED
@@ -0,0 +1,42 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
1 |
+
Sample,Heart_rate,Gender
|
2 |
+
GSM462215,173.0,1.0
|
3 |
+
GSM462216,155.0,1.0
|
4 |
+
GSM462217,183.0,1.0
|
5 |
+
GSM462218,149.0,1.0
|
6 |
+
GSM462219,146.0,1.0
|
7 |
+
GSM462220,157.0,1.0
|
8 |
+
GSM462221,162.0,1.0
|
9 |
+
GSM462222,170.0,1.0
|
10 |
+
GSM462223,165.0,1.0
|
11 |
+
GSM462224,144.0,1.0
|
12 |
+
GSM462225,167.0,1.0
|
13 |
+
GSM462226,165.0,1.0
|
14 |
+
GSM462227,191.0,1.0
|
15 |
+
GSM462228,149.0,1.0
|
16 |
+
GSM462229,160.0,1.0
|
17 |
+
GSM462230,177.0,1.0
|
18 |
+
GSM462231,174.0,1.0
|
19 |
+
GSM462232,165.0,1.0
|
20 |
+
GSM462233,173.0,1.0
|
21 |
+
GSM462234,190.0,1.0
|
22 |
+
GSM462235,190.0,1.0
|
23 |
+
GSM462236,190.0,1.0
|
24 |
+
GSM462237,169.0,1.0
|
25 |
+
GSM462238,160.0,1.0
|
26 |
+
GSM462239,,1.0
|
27 |
+
GSM462240,,1.0
|
28 |
+
GSM462241,,1.0
|
29 |
+
GSM462242,,1.0
|
30 |
+
GSM462243,,1.0
|
31 |
+
GSM462244,,1.0
|
32 |
+
GSM462245,,1.0
|
33 |
+
GSM462246,,1.0
|
34 |
+
GSM462247,,1.0
|
35 |
+
GSM462248,,1.0
|
36 |
+
GSM462249,,1.0
|
37 |
+
GSM462250,,1.0
|
38 |
+
GSM462251,,1.0
|
39 |
+
GSM462252,,1.0
|
40 |
+
GSM462253,,1.0
|
41 |
+
GSM462254,,1.0
|
42 |
+
GSM462255,,1.0
|
output/preprocess/Heart_rate/clinical_data/GSE72462.csv
ADDED
@@ -0,0 +1,2 @@
|
|
|
|
|
|
|
1 |
+
,GSM1862914,GSM1862915,GSM1862916,GSM1862917,GSM1862918,GSM1862919,GSM1862920,GSM1862921,GSM1862922,GSM1862923,GSM1862924,GSM1862925,GSM1862926,GSM1862927,GSM1862928,GSM1862929,GSM1862930,GSM1862931,GSM1862932,GSM1862933,GSM1862934,GSM1862935,GSM1862936,GSM1862937,GSM1862938,GSM1862939,GSM1862940,GSM1862941,GSM1862942,GSM1862943,GSM1862944,GSM1862945,GSM1862946,GSM1862947,GSM1862948,GSM1862949
|
2 |
+
Heart_rate,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1
|
output/preprocess/Heart_rate/clinical_data/TCGA.csv
ADDED
@@ -0,0 +1,93 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
1 |
+
sampleID,Heart_rate,Age,Gender
|
2 |
+
TCGA-OR-A5J1-01,1,58,1
|
3 |
+
TCGA-OR-A5J2-01,1,44,0
|
4 |
+
TCGA-OR-A5J3-01,1,23,0
|
5 |
+
TCGA-OR-A5J4-01,1,23,0
|
6 |
+
TCGA-OR-A5J5-01,1,30,1
|
7 |
+
TCGA-OR-A5J6-01,1,29,0
|
8 |
+
TCGA-OR-A5J7-01,1,30,0
|
9 |
+
TCGA-OR-A5J8-01,1,66,1
|
10 |
+
TCGA-OR-A5J9-01,1,22,0
|
11 |
+
TCGA-OR-A5JA-01,1,53,0
|
12 |
+
TCGA-OR-A5JB-01,1,52,1
|
13 |
+
TCGA-OR-A5JC-01,1,37,1
|
14 |
+
TCGA-OR-A5JD-01,1,57,0
|
15 |
+
TCGA-OR-A5JE-01,1,17,0
|
16 |
+
TCGA-OR-A5JF-01,1,69,0
|
17 |
+
TCGA-OR-A5JG-01,1,61,1
|
18 |
+
TCGA-OR-A5JH-01,1,32,0
|
19 |
+
TCGA-OR-A5JI-01,1,22,1
|
20 |
+
TCGA-OR-A5JJ-01,1,65,1
|
21 |
+
TCGA-OR-A5JK-01,1,49,1
|
22 |
+
TCGA-OR-A5JL-01,1,36,0
|
23 |
+
TCGA-OR-A5JM-01,1,25,0
|
24 |
+
TCGA-OR-A5JO-01,1,26,0
|
25 |
+
TCGA-OR-A5JP-01,1,40,1
|
26 |
+
TCGA-OR-A5JQ-01,1,26,0
|
27 |
+
TCGA-OR-A5JR-01,1,45,1
|
28 |
+
TCGA-OR-A5JS-01,1,65,0
|
29 |
+
TCGA-OR-A5JT-01,1,65,0
|
30 |
+
TCGA-OR-A5JU-01,1,58,0
|
31 |
+
TCGA-OR-A5JV-01,1,55,1
|
32 |
+
TCGA-OR-A5JW-01,1,47,1
|
33 |
+
TCGA-OR-A5JX-01,1,50,1
|
34 |
+
TCGA-OR-A5JY-01,1,68,0
|
35 |
+
TCGA-OR-A5JZ-01,1,60,1
|
36 |
+
TCGA-OR-A5K0-01,1,69,0
|
37 |
+
TCGA-OR-A5K1-01,1,48,1
|
38 |
+
TCGA-OR-A5K2-01,1,32,0
|
39 |
+
TCGA-OR-A5K3-01,1,53,1
|
40 |
+
TCGA-OR-A5K4-01,1,64,0
|
41 |
+
TCGA-OR-A5K5-01,1,59,0
|
42 |
+
TCGA-OR-A5K6-01,1,56,0
|
43 |
+
TCGA-OR-A5K8-01,1,39,1
|
44 |
+
TCGA-OR-A5K9-01,1,61,0
|
45 |
+
TCGA-OR-A5KB-01,1,61,0
|
46 |
+
TCGA-OR-A5KO-01,1,39,0
|
47 |
+
TCGA-OR-A5KP-01,1,45,0
|
48 |
+
TCGA-OR-A5KQ-01,1,20,0
|
49 |
+
TCGA-OR-A5KS-01,1,72,1
|
50 |
+
TCGA-OR-A5KT-01,1,44,0
|
51 |
+
TCGA-OR-A5KU-01,1,37,0
|
52 |
+
TCGA-OR-A5KV-01,1,17,0
|
53 |
+
TCGA-OR-A5KW-01,1,55,0
|
54 |
+
TCGA-OR-A5KX-01,1,25,0
|
55 |
+
TCGA-OR-A5KY-01,1,23,0
|
56 |
+
TCGA-OR-A5KZ-01,1,42,1
|
57 |
+
TCGA-OR-A5L1-01,1,37,0
|
58 |
+
TCGA-OR-A5L2-01,1,83,0
|
59 |
+
TCGA-OR-A5L3-01,1,67,0
|
60 |
+
TCGA-OR-A5L4-01,1,48,0
|
61 |
+
TCGA-OR-A5L5-01,1,77,0
|
62 |
+
TCGA-OR-A5L6-01,1,60,1
|
63 |
+
TCGA-OR-A5L8-01,1,36,0
|
64 |
+
TCGA-OR-A5L9-01,1,53,0
|
65 |
+
TCGA-OR-A5LA-01,1,52,0
|
66 |
+
TCGA-OR-A5LB-01,1,59,1
|
67 |
+
TCGA-OR-A5LC-01,1,71,0
|
68 |
+
TCGA-OR-A5LD-01,1,52,1
|
69 |
+
TCGA-OR-A5LE-01,1,14,1
|
70 |
+
TCGA-OR-A5LF-01,1,74,0
|
71 |
+
TCGA-OR-A5LG-01,1,46,1
|
72 |
+
TCGA-OR-A5LH-01,1,36,0
|
73 |
+
TCGA-OR-A5LI-01,1,42,0
|
74 |
+
TCGA-OR-A5LJ-01,1,54,0
|
75 |
+
TCGA-OR-A5LK-01,1,62,1
|
76 |
+
TCGA-OR-A5LL-01,1,75,0
|
77 |
+
TCGA-OR-A5LM-01,1,23,1
|
78 |
+
TCGA-OR-A5LN-01,1,31,0
|
79 |
+
TCGA-OR-A5LO-01,1,61,0
|
80 |
+
TCGA-OR-A5LP-01,1,37,0
|
81 |
+
TCGA-OR-A5LR-01,1,30,0
|
82 |
+
TCGA-OR-A5LS-01,1,34,0
|
83 |
+
TCGA-OR-A5LT-01,1,57,1
|
84 |
+
TCGA-OU-A5PI-01,1,53,0
|
85 |
+
TCGA-P6-A5OF-01,1,55,0
|
86 |
+
TCGA-P6-A5OG-01,1,45,0
|
87 |
+
TCGA-P6-A5OH-01,1,59,0
|
88 |
+
TCGA-PA-A5YG-01,1,51,1
|
89 |
+
TCGA-PK-A5H8-01,1,42,1
|
90 |
+
TCGA-PK-A5H9-01,1,27,0
|
91 |
+
TCGA-PK-A5HA-01,1,63,1
|
92 |
+
TCGA-PK-A5HB-01,1,63,1
|
93 |
+
TCGA-PK-A5HC-01,1,44,0
|
output/preprocess/Heart_rate/gene_data/GSE117070.csv
ADDED
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
1 |
+
version https://git-lfs.github.com/spec/v1
|
2 |
+
oid sha256:5e8e3f602d2585a45382f9d36be61b68a7e749588eafc117d397c1414dab2fd2
|
3 |
+
size 21556548
|
output/preprocess/Heart_rate/gene_data/GSE12385.csv
ADDED
The diff for this file is too large to render.
See raw diff
|
|
output/preprocess/Heart_rate/gene_data/GSE18583.csv
ADDED
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
1 |
+
version https://git-lfs.github.com/spec/v1
|
2 |
+
oid sha256:d21c1f5a0f493589f0509aa009d5d16a0af4e8844c7d31fe0cf926ea94353313
|
3 |
+
size 81975934
|
output/preprocess/Heart_rate/gene_data/GSE236927.csv
ADDED
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
1 |
+
version https://git-lfs.github.com/spec/v1
|
2 |
+
oid sha256:5dab351c1a962c0462d19d60b2337052ed202e2dda1ad71870c9661492030d95
|
3 |
+
size 11973877
|
output/preprocess/Heart_rate/gene_data/GSE34788.csv
ADDED
@@ -0,0 +1 @@
|
|
|
|
|
1 |
+
ID,GSM855302,GSM855303,GSM855304,GSM855305,GSM855306,GSM855307,GSM855308,GSM855309,GSM855310,GSM855311,GSM855312,GSM855313,GSM855314,GSM855315,GSM855316,GSM855317,GSM855318,GSM855319,GSM855320,GSM855321,GSM855322,GSM855323,GSM855324,GSM855325,GSM855326,GSM855327,GSM855328,GSM855329,GSM855330,GSM855331,GSM855332,GSM855333,GSM855334,GSM855335,GSM855336,GSM855337,GSM855338,GSM855339,GSM855340,GSM855341,GSM855342,GSM855343,GSM855344,GSM855345,GSM855346,GSM855347,GSM855348,GSM855349,GSM855350,GSM855351,GSM855352,GSM855353,GSM855354,GSM855355,GSM855356,GSM855357,GSM855358,GSM855359,GSM855360,GSM855361,GSM855362,GSM855363,GSM855364,GSM855365,GSM855366,GSM855367,GSM855368,GSM855369,GSM855370,GSM855371,GSM855372,GSM855373,GSM855374,GSM855375,GSM855376,GSM855377,GSM855378,GSM855379,GSM855380,GSM855381,GSM855382,GSM855383,GSM855384,GSM855385,GSM855386,GSM855387,GSM855388,GSM855389,GSM855390,GSM855391,GSM855392,GSM855393,GSM855394,GSM855395,GSM855396,GSM855397,GSM855398,GSM855399,GSM855400,GSM855401,GSM855402,GSM855403,GSM855404,GSM855405,GSM855406,GSM855407,GSM855408,GSM855409,GSM855410,GSM855411,GSM855412,GSM855413,GSM855414,GSM855415,GSM855416,GSM855417,GSM855418,GSM855419,GSM855420,GSM855421
|
output/preprocess/Heart_rate/gene_data/GSE35661.csv
ADDED
The diff for this file is too large to render.
See raw diff
|
|
output/preprocess/Heart_rate/gene_data/GSE72462.csv
ADDED
@@ -0,0 +1,5 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
1 |
+
Gene,GSM1862914,GSM1862915,GSM1862916,GSM1862917,GSM1862918,GSM1862919,GSM1862920,GSM1862921,GSM1862922,GSM1862923,GSM1862924,GSM1862925,GSM1862926,GSM1862927,GSM1862928,GSM1862929,GSM1862930,GSM1862931,GSM1862932,GSM1862933,GSM1862934,GSM1862935,GSM1862936,GSM1862937,GSM1862938,GSM1862939,GSM1862940,GSM1862941,GSM1862942,GSM1862943,GSM1862944,GSM1862945,GSM1862946,GSM1862947,GSM1862948,GSM1862949
|
2 |
+
A4GALT,13.714,13.627,13.718,13.673,13.753,13.704,13.637,13.513,13.658,13.665,13.605,13.746,13.638,13.638,13.747,13.494,13.635,13.592,13.641,13.616,13.72,13.54,13.634,13.678,13.685,13.833,13.626,13.815,13.754,13.55,13.7,13.709,13.566,13.647,13.566,13.695
|
3 |
+
EIF1B,3.466,3.275,3.405,3.293,3.399,3.287,3.267,3.552,3.398,3.41,3.438,3.457,3.438,3.362,3.299,3.381,3.421,3.387,3.165,3.489,3.41,3.5,3.47,3.261,3.386,3.469,3.441,3.357,3.41,3.286,3.41,3.392,3.406,3.223,3.381,3.41
|
4 |
+
RANP1,35.061,34.49,34.167,34.726,33.93,34.704,35.043,34.46,35.196,33.717,34.849000000000004,33.798,33.85,34.349,34.027,34.039,34.418,34.501,34.337,33.593,32.887,35.351,34.147,36.199999999999996,34.881,33.823,34.525999999999996,34.014,34.689,32.546,33.251000000000005,33.696,34.507000000000005,34.087,33.133,34.325
|
5 |
+
TCIM,28.993000000000002,29.801000000000002,28.988999999999997,28.71,28.452,28.442,28.916,29.511,28.323999999999998,28.618,28.439,29.28,28.33,28.591,28.637,28.006,29.745,28.257,28.992,28.498,28.977,29.001,29.115000000000002,28.975,29.411,28.524,28.322,27.917,28.997999999999998,28.581,29.233999999999998,28.428,28.394,29.081,29.47,29.046
|
output/preprocess/Heart_rate/gene_data/TCGA.csv
ADDED
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
1 |
+
version https://git-lfs.github.com/spec/v1
|
2 |
+
oid sha256:eb88446bced0cff3e824c9a989f3599680dbfcf274543b4e52cd5125bba5dbcd
|
3 |
+
size 23776634
|
output/preprocess/Height/GSE71994.csv
ADDED
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
1 |
+
version https://git-lfs.github.com/spec/v1
|
2 |
+
oid sha256:fcd8b393641fbcfe4d6c37f5f7bd32d09c45eba2c6f72b642acbbb8a793f27a9
|
3 |
+
size 14949410
|
output/preprocess/Height/clinical_data/GSE101709.csv
ADDED
@@ -0,0 +1,99 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
1 |
+
,Height,Age
|
2 |
+
GSM2712782,,1.0
|
3 |
+
GSM2712783,,1.0
|
4 |
+
GSM2712784,,1.0
|
5 |
+
GSM2712785,,1.0
|
6 |
+
GSM2712786,,1.0
|
7 |
+
GSM2712787,,1.0
|
8 |
+
GSM2712788,,1.0
|
9 |
+
GSM2712789,,1.0
|
10 |
+
GSM2712790,,1.0
|
11 |
+
GSM2712791,,1.0
|
12 |
+
GSM2712792,,1.0
|
13 |
+
GSM2712793,,1.0
|
14 |
+
GSM2712794,,1.0
|
15 |
+
GSM2712795,,1.0
|
16 |
+
GSM2712796,,1.0
|
17 |
+
GSM2712797,,1.0
|
18 |
+
GSM2712798,,1.0
|
19 |
+
GSM2712799,,1.0
|
20 |
+
GSM2712800,,1.0
|
21 |
+
GSM2712801,,1.0
|
22 |
+
GSM2712802,,1.0
|
23 |
+
GSM2712803,,1.0
|
24 |
+
GSM2712804,,1.0
|
25 |
+
GSM2712805,,1.0
|
26 |
+
GSM2712806,,1.0
|
27 |
+
GSM2712807,,1.0
|
28 |
+
GSM2712808,,1.0
|
29 |
+
GSM2712809,,1.0
|
30 |
+
GSM2712810,,1.0
|
31 |
+
GSM2712811,,1.0
|
32 |
+
GSM2712812,,1.0
|
33 |
+
GSM2712813,,1.0
|
34 |
+
GSM2712814,,1.0
|
35 |
+
GSM2712815,,1.0
|
36 |
+
GSM2712816,,1.0
|
37 |
+
GSM2712817,,1.0
|
38 |
+
GSM2712818,,1.0
|
39 |
+
GSM2712819,,1.0
|
40 |
+
GSM2712820,,1.0
|
41 |
+
GSM2712821,,1.0
|
42 |
+
GSM2712822,,1.0
|
43 |
+
GSM2712823,,1.0
|
44 |
+
GSM2712824,,1.0
|
45 |
+
GSM2712825,,0.0
|
46 |
+
GSM2712826,,0.0
|
47 |
+
GSM2712827,,0.0
|
48 |
+
GSM2712828,,0.0
|
49 |
+
GSM2712829,,0.0
|
50 |
+
GSM2712830,,0.0
|
51 |
+
GSM2712831,,0.0
|
52 |
+
GSM2712832,,0.0
|
53 |
+
GSM2712833,,0.0
|
54 |
+
GSM2712834,,0.0
|
55 |
+
GSM2712835,,0.0
|
56 |
+
GSM2712836,,0.0
|
57 |
+
GSM2712837,,0.0
|
58 |
+
GSM2712838,,0.0
|
59 |
+
GSM2712839,,0.0
|
60 |
+
GSM2712840,,0.0
|
61 |
+
GSM2712841,,0.0
|
62 |
+
GSM2712842,,0.0
|
63 |
+
GSM2712843,,0.0
|
64 |
+
GSM2712844,,1.0
|
65 |
+
GSM2712845,,1.0
|
66 |
+
GSM2712846,,1.0
|
67 |
+
GSM2712847,,1.0
|
68 |
+
GSM2712848,,0.0
|
69 |
+
GSM2712849,,0.0
|
70 |
+
GSM2712850,,0.0
|
71 |
+
GSM2712851,,0.0
|
72 |
+
GSM2712852,,0.0
|
73 |
+
GSM2712853,,0.0
|
74 |
+
GSM2712854,,0.0
|
75 |
+
GSM2712855,,0.0
|
76 |
+
GSM2712856,,0.0
|
77 |
+
GSM2712857,,0.0
|
78 |
+
GSM2712858,,0.0
|
79 |
+
GSM2712859,,0.0
|
80 |
+
GSM2712860,,0.0
|
81 |
+
GSM2712861,,0.0
|
82 |
+
GSM2712862,,0.0
|
83 |
+
GSM2712863,,0.0
|
84 |
+
GSM2712864,,0.0
|
85 |
+
GSM2712865,,0.0
|
86 |
+
GSM2712866,,0.0
|
87 |
+
GSM2712867,,0.0
|
88 |
+
GSM2712868,,0.0
|
89 |
+
GSM2712869,,0.0
|
90 |
+
GSM2712870,,0.0
|
91 |
+
GSM2712871,,0.0
|
92 |
+
GSM2712872,,0.0
|
93 |
+
GSM2712873,,0.0
|
94 |
+
GSM2712874,,0.0
|
95 |
+
GSM2712875,,0.0
|
96 |
+
GSM2712876,,0.0
|
97 |
+
GSM2712877,,0.0
|
98 |
+
GSM2712878,,0.0
|
99 |
+
GSM2712879,,0.0
|
output/preprocess/Height/clinical_data/GSE101710.csv
ADDED
@@ -0,0 +1,80 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
1 |
+
Sample,Height,Age
|
2 |
+
GSM2712880,,1.0
|
3 |
+
GSM2712881,,1.0
|
4 |
+
GSM2712882,,1.0
|
5 |
+
GSM2712883,,1.0
|
6 |
+
GSM2712884,,1.0
|
7 |
+
GSM2712885,,1.0
|
8 |
+
GSM2712886,,1.0
|
9 |
+
GSM2712887,,1.0
|
10 |
+
GSM2712888,,1.0
|
11 |
+
GSM2712889,,1.0
|
12 |
+
GSM2712890,,1.0
|
13 |
+
GSM2712891,,1.0
|
14 |
+
GSM2712892,,1.0
|
15 |
+
GSM2712893,,1.0
|
16 |
+
GSM2712894,,1.0
|
17 |
+
GSM2712895,,1.0
|
18 |
+
GSM2712896,,1.0
|
19 |
+
GSM2712897,,1.0
|
20 |
+
GSM2712898,,1.0
|
21 |
+
GSM2712899,,0.0
|
22 |
+
GSM2712900,,0.0
|
23 |
+
GSM2712901,,0.0
|
24 |
+
GSM2712902,,0.0
|
25 |
+
GSM2712903,,0.0
|
26 |
+
GSM2712904,,0.0
|
27 |
+
GSM2712905,,0.0
|
28 |
+
GSM2712906,,0.0
|
29 |
+
GSM2712907,,0.0
|
30 |
+
GSM2712908,,0.0
|
31 |
+
GSM2712909,,0.0
|
32 |
+
GSM2712910,,0.0
|
33 |
+
GSM2712911,,0.0
|
34 |
+
GSM2712912,,0.0
|
35 |
+
GSM2712913,,0.0
|
36 |
+
GSM2712914,,0.0
|
37 |
+
GSM2712915,,0.0
|
38 |
+
GSM2712916,,0.0
|
39 |
+
GSM2712917,,0.0
|
40 |
+
GSM2712918,,0.0
|
41 |
+
GSM2712919,,0.0
|
42 |
+
GSM2712920,,0.0
|
43 |
+
GSM2712921,,0.0
|
44 |
+
GSM2712922,,0.0
|
45 |
+
GSM2712923,,0.0
|
46 |
+
GSM2712924,,0.0
|
47 |
+
GSM2712925,,0.0
|
48 |
+
GSM2712926,,0.0
|
49 |
+
GSM2712927,,0.0
|
50 |
+
GSM2712928,,0.0
|
51 |
+
GSM2712929,,0.0
|
52 |
+
GSM2712930,,0.0
|
53 |
+
GSM2712931,,0.0
|
54 |
+
GSM2712932,,0.0
|
55 |
+
GSM2712933,,0.0
|
56 |
+
GSM2712934,,0.0
|
57 |
+
GSM2712935,,0.0
|
58 |
+
GSM2712936,,0.0
|
59 |
+
GSM2712937,,0.0
|
60 |
+
GSM2712938,,0.0
|
61 |
+
GSM2712939,,0.0
|
62 |
+
GSM2712940,,0.0
|
63 |
+
GSM2712941,,0.0
|
64 |
+
GSM2712942,,0.0
|
65 |
+
GSM2712943,,1.0
|
66 |
+
GSM2712944,,1.0
|
67 |
+
GSM2712945,,1.0
|
68 |
+
GSM2712946,,1.0
|
69 |
+
GSM2712947,,1.0
|
70 |
+
GSM2712948,,1.0
|
71 |
+
GSM2712949,,1.0
|
72 |
+
GSM2712950,,1.0
|
73 |
+
GSM2712951,,1.0
|
74 |
+
GSM2712952,,1.0
|
75 |
+
GSM2712953,,1.0
|
76 |
+
GSM2712954,,1.0
|
77 |
+
GSM2712955,,1.0
|
78 |
+
GSM2712956,,1.0
|
79 |
+
GSM2712957,,1.0
|
80 |
+
GSM2712958,,1.0
|
output/preprocess/Height/clinical_data/GSE106800.csv
ADDED
@@ -0,0 +1,48 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
1 |
+
Sample,Height,Age,Gender
|
2 |
+
GSM2850460,,24.0,1.0
|
3 |
+
GSM2850461,,24.0,1.0
|
4 |
+
GSM2850462,,24.0,1.0
|
5 |
+
GSM2850463,,24.0,1.0
|
6 |
+
GSM2850464,,24.0,1.0
|
7 |
+
GSM2850465,,24.0,1.0
|
8 |
+
GSM2850466,,24.0,1.0
|
9 |
+
GSM2850467,,24.0,1.0
|
10 |
+
GSM2850468,,21.0,1.0
|
11 |
+
GSM2850469,,21.0,1.0
|
12 |
+
GSM2850470,,21.0,1.0
|
13 |
+
GSM2850471,,21.0,1.0
|
14 |
+
GSM2850472,,20.0,1.0
|
15 |
+
GSM2850473,,20.0,1.0
|
16 |
+
GSM2850474,,20.0,1.0
|
17 |
+
GSM2850475,,20.0,1.0
|
18 |
+
GSM2850476,,22.0,1.0
|
19 |
+
GSM2850477,,22.0,1.0
|
20 |
+
GSM2850478,,22.0,1.0
|
21 |
+
GSM2850479,,22.0,1.0
|
22 |
+
GSM2850480,,20.0,1.0
|
23 |
+
GSM2850481,,20.0,1.0
|
24 |
+
GSM2850482,,20.0,1.0
|
25 |
+
GSM2850483,,19.0,1.0
|
26 |
+
GSM2850484,,19.0,1.0
|
27 |
+
GSM2850485,,19.0,1.0
|
28 |
+
GSM2850486,,19.0,1.0
|
29 |
+
GSM2850487,,22.0,1.0
|
30 |
+
GSM2850488,,22.0,1.0
|
31 |
+
GSM2850489,,22.0,1.0
|
32 |
+
GSM2850490,,22.0,1.0
|
33 |
+
GSM2850491,,21.0,1.0
|
34 |
+
GSM2850492,,21.0,1.0
|
35 |
+
GSM2850493,,21.0,1.0
|
36 |
+
GSM2850494,,21.0,1.0
|
37 |
+
GSM2850495,,26.0,1.0
|
38 |
+
GSM2850496,,26.0,1.0
|
39 |
+
GSM2850497,,26.0,1.0
|
40 |
+
GSM2850498,,26.0,1.0
|
41 |
+
GSM2850499,,20.0,1.0
|
42 |
+
GSM2850500,,20.0,1.0
|
43 |
+
GSM2850501,,20.0,1.0
|
44 |
+
GSM2850502,,20.0,1.0
|
45 |
+
GSM2850503,,29.0,1.0
|
46 |
+
GSM2850504,,29.0,1.0
|
47 |
+
GSM2850505,,29.0,1.0
|
48 |
+
GSM2850506,,29.0,1.0
|
output/preprocess/Height/clinical_data/GSE117525.csv
ADDED
@@ -0,0 +1,4 @@
|
|
|
|
|
|
|
|
|
|
|
1 |
+
,GSM3302211,GSM3302212,GSM3302213,GSM3302214,GSM3302215,GSM3302216,GSM3302217,GSM3302218,GSM3302219,GSM3302220,GSM3302221,GSM3302222,GSM3302223,GSM3302224,GSM3302225,GSM3302226,GSM3302227,GSM3302228,GSM3302229,GSM3302230,GSM3302231,GSM3302232,GSM3302233,GSM3302234,GSM3302235,GSM3302236,GSM3302237,GSM3302238,GSM3302239,GSM3302240,GSM3302241,GSM3302242,GSM3302243,GSM3302244,GSM3302245,GSM3302246,GSM3302247,GSM3302248,GSM3302249,GSM3302250,GSM3302251,GSM3302252,GSM3302253,GSM3302254,GSM3302255,GSM3302256,GSM3302257,GSM3302258,GSM3302259,GSM3302260,GSM3302261,GSM3302262,GSM3302263,GSM3302264,GSM3302265,GSM3302266,GSM3302267,GSM3302268,GSM3302269,GSM3302270,GSM3302271,GSM3302272,GSM3302273,GSM3302274,GSM3302275,GSM3302276,GSM3302277,GSM3302278,GSM3302279,GSM3302280,GSM3302281,GSM3302282,GSM3302283,GSM3302284,GSM3302285,GSM3302286,GSM3302287,GSM3302288,GSM3302289,GSM3302290,GSM3302291,GSM3302292,GSM3302293,GSM3302294,GSM3302295,GSM3302296,GSM3302297,GSM3302298,GSM3302299,GSM3302300,GSM3302301,GSM3302302,GSM3302303,GSM3302304,GSM3302305,GSM3302306,GSM3302307,GSM3302308,GSM3302309,GSM3302310,GSM3302311,GSM3302312,GSM3302313,GSM3302314,GSM3302315,GSM3302316,GSM3302317,GSM3302318,GSM3302319,GSM3302320,GSM3302321,GSM3302322,GSM3302323,GSM3302324,GSM3302325,GSM3302326,GSM3302327,GSM3302328,GSM3302329,GSM3302330,GSM3302331,GSM3302332,GSM3302333,GSM3302334,GSM3302335,GSM3302336,GSM3302337,GSM3302338,GSM3302339,GSM3302340,GSM3302341,GSM3302342,GSM3302343,GSM3302344,GSM3302345,GSM3302346,GSM3302347,GSM3302348,GSM3302349,GSM3302350,GSM3302351,GSM3302352,GSM3302353,GSM3302354,GSM3302355,GSM3302356,GSM3302357,GSM3302358,GSM3302359,GSM3302360,GSM3302361,GSM3302362,GSM3302363,GSM3302364,GSM3302365,GSM3302366,GSM3302367,GSM3302368,GSM3302369,GSM3302370,GSM3302371,GSM3302372,GSM3302373,GSM3302374,GSM3302375,GSM3302376,GSM3302377,GSM3302378,GSM3302379,GSM3302380,GSM3302381,GSM3302382,GSM3302383,GSM3302384,GSM3302385,GSM3302386,GSM3302387,GSM3302388,GSM3302389,GSM3302390,GSM3302391,GSM3302392,GSM3302393,GSM3302394,GSM3302395,GSM3302396,GSM3302397,GSM3302398,GSM3302399,GSM3302400,GSM3302401,GSM3302402,GSM3302403,GSM3302404,GSM3302405,GSM3302406,GSM3302407,GSM3302408,GSM3302409,GSM3302410,GSM3302411,GSM3302412,GSM3302413,GSM3302414,GSM3302415,GSM3302416,GSM3302417,GSM3302418,GSM3302419,GSM3302420,GSM3302421,GSM3302422,GSM3302423,GSM3302424,GSM3302425,GSM3302426,GSM3302427,GSM3302428,GSM3302429,GSM3302430,GSM3302431,GSM3302432,GSM3302433,GSM3302434,GSM3302435,GSM3302436,GSM3302437,GSM3302438,GSM3302439,GSM3302440,GSM3302441,GSM3302442,GSM3302443,GSM3302444,GSM3302445,GSM3302446,GSM3302447,GSM3302448,GSM3302449,GSM3302450,GSM3302451,GSM3302452,GSM3302453,GSM3302454,GSM3302455,GSM3302456,GSM3302457,GSM3302458,GSM3302459,GSM3302460,GSM3302461,GSM3302462,GSM3302463,GSM3302464,GSM3302465,GSM3302466,GSM3302467,GSM3302468,GSM3302469
|
2 |
+
Height,1.94,1.84,1.63,1.76,1.66,1.56,1.66,1.86,1.59,1.77,1.84,1.9,1.69,,,,,,,1.68,1.97,1.72,1.72,1.74,1.58,1.63,1.55,1.86,1.69,1.78,1.86,1.73,1.84,,,,,,,1.79,1.81,1.8,1.72,1.54,1.65,1.55,1.65,1.71,1.69,1.61,1.82,1.86,1.82,1.72,,,,,,,,1.75,1.84,1.91,1.63,1.72,1.77,1.75,1.69,1.69,1.79,1.7,1.86,1.85,1.55,,,,,,,,1.91,1.78,1.63,1.63,1.56,1.77,1.54,1.8,1.91,1.75,1.76,1.78,1.88,1.86,,,,,,,,1.79,1.68,1.83,1.69,1.55,1.66,1.79,1.89,1.62,1.71,1.83,1.63,,,,,,1.75,1.85,1.85,1.76,1.75,1.8,1.48,1.7,1.68,1.63,1.87,1.93,1.59,,,,,,1.68,1.76,1.75,1.76,1.59,1.77,1.71,1.85,1.61,1.79,1.69,1.82,1.87,,,,1.88,,1.78,1.72,1.84,1.87,1.76,1.77,1.69,1.84,1.62,1.71,1.67,1.72,1.88,1.8,1.81,1.67,1.55,1.72,1.83,,,,,1.81,1.9,1.9,1.83,1.72,1.81,1.76,1.81,1.69,1.64,1.76,1.67,1.7,1.82,1.87,1.71,1.73,1.76,1.7,,,,,,1.85,1.83,1.73,1.64,1.61,1.79,1.73,1.73,1.81,1.65,1.56,1.76,1.83,1.83,1.78,1.64,1.64,1.74,1.96,,,,,,1.83,1.86,1.76,1.58,1.8,1.72,1.63,1.77,1.64,1.83,1.72,1.84,1.87,1.92,1.54,1.74,,,,,,,1.6,,1.68,,1.58,,1.6,1.71,,
|
3 |
+
Age,21.0,22.0,83.0,77.0,85.0,79.0,74.0,72.0,73.0,83.0,21.0,21.0,93.0,77.0,85.0,79.0,74.0,72.0,73.0,66.0,18.0,23.0,87.0,89.0,81.0,91.0,84.0,80.0,79.0,90.0,23.0,25.0,96.0,89.0,81.0,91.0,84.0,80.0,79.0,79.0,26.0,19.0,76.0,74.0,84.0,84.0,78.0,66.0,86.0,68.0,73.0,18.0,21.0,67.0,74.0,84.0,84.0,78.0,66.0,86.0,68.0,84.0,22.0,23.0,72.0,86.0,75.0,73.0,69.0,76.0,67.0,66.0,21.0,23.0,68.0,86.0,75.0,73.0,69.0,76.0,67.0,66.0,20.0,66.0,72.0,70.0,76.0,66.0,76.0,68.0,67.0,76.0,76.0,21.0,19.0,68.0,72.0,70.0,76.0,66.0,76.0,68.0,67.0,84.0,80.0,23.0,70.0,67.0,66.0,67.0,66.0,67.0,70.0,22.0,70.0,67.0,66.0,67.0,66.0,67.0,74.0,23.0,22.0,74.0,70.0,67.0,81.0,70.0,71.0,76.0,22.0,23.0,81.0,70.0,67.0,81.0,70.0,71.0,78.0,72.0,25.0,18.0,70.0,67.0,69.0,29.0,66.0,72.0,74.0,18.0,21.0,70.0,67.0,69.0,22.0,66.0,76.0,77.0,21.0,18.0,19.0,72.0,95.0,72.0,85.0,66.0,74.0,66.0,19.0,19.0,18.0,91.0,83.0,71.0,76.0,85.0,66.0,74.0,66.0,21.0,20.0,19.0,65.0,77.0,73.0,72.0,73.0,74.0,77.0,68.0,76.0,23.0,21.0,18.0,85.0,71.0,77.0,82.0,73.0,74.0,77.0,68.0,76.0,21.0,27.0,21.0,81.0,87.0,80.0,69.0,71.0,65.0,65.0,68.0,65.0,20.0,20.0,22.0,72.0,67.0,75.0,71.0,71.0,65.0,65.0,68.0,65.0,23.0,20.0,84.0,89.0,69.0,74.0,80.0,76.0,65.0,65.0,66.0,68.0,19.0,23.0,78.0,77.0,80.0,76.0,65.0,65.0,66.0,68.0,67.0,67.0,72.0,72.0,69.0,69.0,68.0,73.0,68.0,73.0
|
4 |
+
Gender,1.0,1.0,1.0,1.0,0.0,0.0,0.0,1.0,0.0,1.0,1.0,1.0,1.0,1.0,0.0,0.0,0.0,1.0,0.0,1.0,1.0,1.0,1.0,1.0,0.0,0.0,0.0,1.0,1.0,1.0,1.0,1.0,1.0,1.0,0.0,0.0,0.0,1.0,1.0,1.0,1.0,1.0,1.0,0.0,1.0,0.0,0.0,1.0,1.0,0.0,1.0,1.0,1.0,0.0,0.0,1.0,0.0,0.0,1.0,1.0,0.0,1.0,1.0,1.0,0.0,0.0,1.0,1.0,0.0,1.0,1.0,1.0,1.0,1.0,0.0,0.0,1.0,1.0,0.0,1.0,1.0,1.0,1.0,1.0,0.0,0.0,0.0,1.0,0.0,1.0,1.0,1.0,1.0,1.0,1.0,1.0,0.0,0.0,0.0,1.0,0.0,1.0,1.0,1.0,1.0,1.0,1.0,0.0,0.0,1.0,1.0,0.0,1.0,1.0,0.0,0.0,0.0,1.0,1.0,0.0,1.0,1.0,1.0,0.0,1.0,1.0,0.0,0.0,0.0,1.0,1.0,1.0,0.0,1.0,1.0,0.0,0.0,0.0,1.0,1.0,1.0,1.0,0.0,1.0,1.0,1.0,0.0,1.0,1.0,1.0,1.0,0.0,1.0,1.0,1.0,0.0,1.0,1.0,1.0,1.0,1.0,1.0,1.0,1.0,0.0,0.0,1.0,1.0,1.0,1.0,1.0,1.0,0.0,1.0,1.0,0.0,0.0,1.0,1.0,1.0,1.0,1.0,1.0,0.0,1.0,1.0,1.0,1.0,0.0,1.0,1.0,1.0,1.0,1.0,1.0,1.0,1.0,1.0,1.0,1.0,0.0,1.0,1.0,1.0,1.0,1.0,1.0,0.0,1.0,1.0,1.0,1.0,0.0,0.0,1.0,1.0,1.0,1.0,1.0,0.0,1.0,1.0,1.0,1.0,0.0,0.0,1.0,1.0,1.0,1.0,0.0,1.0,1.0,1.0,1.0,0.0,1.0,1.0,1.0,1.0,1.0,1.0,1.0,1.0,1.0,0.0,1.0,1.0,1.0,0.0,0.0,1.0,1.0,0.0,0.0,0.0,0.0,0.0,0.0
|
output/preprocess/Height/clinical_data/GSE152073.csv
ADDED
@@ -0,0 +1,91 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
1 |
+
Sample,Height,Age
|
2 |
+
GSM4602151,,76.0
|
3 |
+
GSM4602152,,77.0
|
4 |
+
GSM4602153,,75.0
|
5 |
+
GSM4602154,,80.0
|
6 |
+
GSM4602155,,77.0
|
7 |
+
GSM4602156,,82.0
|
8 |
+
GSM4602157,,80.0
|
9 |
+
GSM4602158,,83.0
|
10 |
+
GSM4602159,,78.0
|
11 |
+
GSM4602160,,82.0
|
12 |
+
GSM4602161,,82.0
|
13 |
+
GSM4602162,,78.0
|
14 |
+
GSM4602163,,78.0
|
15 |
+
GSM4602164,,78.0
|
16 |
+
GSM4602165,,82.0
|
17 |
+
GSM4602166,,83.0
|
18 |
+
GSM4602167,,74.0
|
19 |
+
GSM4602168,,81.0
|
20 |
+
GSM4602169,,77.0
|
21 |
+
GSM4602170,,91.0
|
22 |
+
GSM4602171,,79.0
|
23 |
+
GSM4602172,,76.0
|
24 |
+
GSM4602173,,88.0
|
25 |
+
GSM4602174,,75.0
|
26 |
+
GSM4602175,,83.0
|
27 |
+
GSM4602176,,76.0
|
28 |
+
GSM4602177,,76.0
|
29 |
+
GSM4602178,,76.0
|
30 |
+
GSM4602179,,77.0
|
31 |
+
GSM4602180,,74.0
|
32 |
+
GSM4602181,,76.0
|
33 |
+
GSM4602182,,76.0
|
34 |
+
GSM4602183,,79.0
|
35 |
+
GSM4602184,,81.0
|
36 |
+
GSM4602185,,80.0
|
37 |
+
GSM4602186,,78.0
|
38 |
+
GSM4602187,,79.0
|
39 |
+
GSM4602188,,81.0
|
40 |
+
GSM4602189,,74.0
|
41 |
+
GSM4602190,,79.0
|
42 |
+
GSM4602191,,80.0
|
43 |
+
GSM4602192,,81.0
|
44 |
+
GSM4602193,,82.0
|
45 |
+
GSM4602194,,82.0
|
46 |
+
GSM4602195,,87.0
|
47 |
+
GSM4602196,,78.0
|
48 |
+
GSM4602197,,87.0
|
49 |
+
GSM4602198,,77.0
|
50 |
+
GSM4602199,,78.0
|
51 |
+
GSM4602200,,86.0
|
52 |
+
GSM4602201,,81.0
|
53 |
+
GSM4602202,,88.0
|
54 |
+
GSM4602203,,83.0
|
55 |
+
GSM4602204,,75.0
|
56 |
+
GSM4602205,,82.0
|
57 |
+
GSM4602206,,81.0
|
58 |
+
GSM4602207,,80.0
|
59 |
+
GSM4602208,,78.0
|
60 |
+
GSM4602209,,70.0
|
61 |
+
GSM4602210,,82.0
|
62 |
+
GSM4602211,,76.0
|
63 |
+
GSM4602212,,76.0
|
64 |
+
GSM4602213,,76.0
|
65 |
+
GSM4602214,,74.0
|
66 |
+
GSM4602215,,86.0
|
67 |
+
GSM4602216,,82.0
|
68 |
+
GSM4602217,,75.0
|
69 |
+
GSM4602218,,74.0
|
70 |
+
GSM4602219,,82.0
|
71 |
+
GSM4602220,,76.0
|
72 |
+
GSM4602221,,85.0
|
73 |
+
GSM4602222,,85.0
|
74 |
+
GSM4602223,,73.0
|
75 |
+
GSM4602224,,85.0
|
76 |
+
GSM4602225,,82.0
|
77 |
+
GSM4602226,,86.0
|
78 |
+
GSM4602227,,81.0
|
79 |
+
GSM4602228,,82.0
|
80 |
+
GSM4602229,,85.0
|
81 |
+
GSM4602230,,78.0
|
82 |
+
GSM4602231,,83.0
|
83 |
+
GSM4602232,,84.0
|
84 |
+
GSM4602233,,74.0
|
85 |
+
GSM4602234,,77.0
|
86 |
+
GSM4602235,,87.0
|
87 |
+
GSM4602236,,76.0
|
88 |
+
GSM4602237,,74.0
|
89 |
+
GSM4602238,,81.0
|
90 |
+
GSM4602239,,79.0
|
91 |
+
GSM4602240,,79.0
|
output/preprocess/Height/clinical_data/GSE71994.csv
ADDED
@@ -0,0 +1,4 @@
|
|
|
|
|
|
|
|
|
|
|
1 |
+
,GSM1849376,GSM1849377,GSM1849378,GSM1849379,GSM1849380,GSM1849381,GSM1849382,GSM1849383,GSM1849384,GSM1849385,GSM1849386,GSM1849387,GSM1849388,GSM1849389,GSM1849390,GSM1849391,GSM1849392,GSM1849393,GSM1849394,GSM1849395,GSM1849396,GSM1849397,GSM1849398,GSM1849399,GSM1849400,GSM1849401,GSM1849402,GSM1849403,GSM1849404,GSM1849405,GSM1849406,GSM1849407,GSM1849408,GSM1849409,GSM1849410,GSM1849411,GSM1849412,GSM1849413,GSM1849414,GSM1849415
|
2 |
+
Height,1.57,1.65,1.85,1.67,1.53,1.85,1.62,1.63,1.51,1.6,1.95,1.5,1.7,1.68,1.62,1.7,1.65,1.59,1.57,1.44,1.85,1.59,1.95,1.65,1.57,1.68,1.63,1.62,1.67,1.5,1.44,1.7,1.6,1.65,1.57,1.62,1.53,1.7,1.85,1.51
|
3 |
+
Age,32.0,36.0,38.0,48.0,52.0,53.0,55.0,58.0,59.0,59.0,59.0,61.0,62.0,64.0,66.0,68.0,69.0,71.0,73.0,79.0,38.0,71.0,59.0,69.0,32.0,64.0,58.0,66.0,48.0,61.0,79.0,62.0,59.0,36.0,73.0,55.0,52.0,68.0,53.0,59.0
|
4 |
+
Gender,0.0,0.0,1.0,1.0,0.0,1.0,0.0,1.0,0.0,0.0,1.0,0.0,1.0,0.0,0.0,1.0,0.0,0.0,0.0,0.0,1.0,0.0,1.0,0.0,0.0,0.0,1.0,0.0,1.0,0.0,0.0,1.0,0.0,0.0,0.0,0.0,0.0,1.0,1.0,0.0
|
output/preprocess/Height/clinical_data/GSE97475.csv
ADDED
@@ -0,0 +1,159 @@
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
1 |
+
Sample,Height,Age,Gender
|
2 |
+
GSM2568698,,60.0,1.0
|
3 |
+
GSM2568699,,60.0,1.0
|
4 |
+
GSM2568700,,61.0,0.0
|
5 |
+
GSM2568701,,57.0,0.0
|
6 |
+
GSM2568702,,57.0,0.0
|
7 |
+
GSM2568703,,57.0,0.0
|
8 |
+
GSM2568704,,57.0,0.0
|
9 |
+
GSM2568705,,57.0,0.0
|
10 |
+
GSM2568706,,28.0,1.0
|
11 |
+
GSM2568707,,28.0,1.0
|
12 |
+
GSM2568708,,28.0,1.0
|
13 |
+
GSM2568709,,28.0,1.0
|
14 |
+
GSM2568710,,28.0,1.0
|
15 |
+
GSM2568711,,35.0,1.0
|
16 |
+
GSM2568712,,35.0,1.0
|
17 |
+
GSM2568713,,35.0,1.0
|
18 |
+
GSM2568714,,35.0,1.0
|
19 |
+
GSM2568715,,35.0,1.0
|
20 |
+
GSM2568716,,23.0,0.0
|
21 |
+
GSM2568717,,23.0,0.0
|
22 |
+
GSM2568718,,23.0,0.0
|
23 |
+
GSM2568719,,23.0,0.0
|
24 |
+
GSM2568720,,23.0,0.0
|
25 |
+
GSM2568721,,53.0,1.0
|
26 |
+
GSM2568722,,53.0,1.0
|
27 |
+
GSM2568723,,53.0,1.0
|
28 |
+
GSM2568724,,53.0,1.0
|
29 |
+
GSM2568725,,53.0,1.0
|
30 |
+
GSM2568726,,53.0,0.0
|
31 |
+
GSM2568727,,53.0,0.0
|
32 |
+
GSM2568728,,53.0,0.0
|
33 |
+
GSM2568729,,53.0,0.0
|
34 |
+
GSM2568730,,53.0,0.0
|
35 |
+
GSM2568731,,23.0,1.0
|
36 |
+
GSM2568732,,23.0,1.0
|
37 |
+
GSM2568733,,23.0,1.0
|
38 |
+
GSM2568734,,23.0,1.0
|
39 |
+
GSM2568735,,23.0,1.0
|
40 |
+
GSM2568736,,19.0,0.0
|
41 |
+
GSM2568737,,19.0,0.0
|
42 |
+
GSM2568738,,19.0,0.0
|
43 |
+
GSM2568739,,19.0,0.0
|
44 |
+
GSM2568740,,19.0,0.0
|
45 |
+
GSM2568741,,33.0,0.0
|
46 |
+
GSM2568742,,33.0,0.0
|
47 |
+
GSM2568743,,33.0,0.0
|
48 |
+
GSM2568744,,19.0,0.0
|
49 |
+
GSM2568745,,19.0,0.0
|
50 |
+
GSM2568746,,19.0,0.0
|
51 |
+
GSM2568747,,19.0,0.0
|
52 |
+
GSM2568748,,19.0,0.0
|
53 |
+
GSM2568749,,23.0,0.0
|
54 |
+
GSM2568750,,23.0,0.0
|
55 |
+
GSM2568751,,23.0,0.0
|
56 |
+
GSM2568752,,23.0,0.0
|
57 |
+
GSM2568753,,23.0,0.0
|
58 |
+
GSM2568754,,19.0,0.0
|
59 |
+
GSM2568755,,19.0,0.0
|
60 |
+
GSM2568756,,19.0,0.0
|
61 |
+
GSM2568757,,19.0,0.0
|
62 |
+
GSM2568758,,29.0,0.0
|
63 |
+
GSM2568759,,29.0,0.0
|
64 |
+
GSM2568760,,29.0,0.0
|
65 |
+
GSM2568761,,29.0,0.0
|
66 |
+
GSM2568762,,29.0,0.0
|
67 |
+
GSM2568763,,29.0,0.0
|
68 |
+
GSM2568764,,29.0,0.0
|
69 |
+
GSM2568765,,29.0,0.0
|
70 |
+
GSM2568766,,29.0,0.0
|
71 |
+
GSM2568767,,29.0,0.0
|
72 |
+
GSM2568768,,18.0,1.0
|
73 |
+
GSM2568769,,18.0,1.0
|
74 |
+
GSM2568770,,18.0,1.0
|
75 |
+
GSM2568771,,18.0,1.0
|
76 |
+
GSM2568772,,18.0,1.0
|
77 |
+
GSM2568773,,18.0,1.0
|
78 |
+
GSM2568774,,18.0,1.0
|
79 |
+
GSM2568775,,18.0,1.0
|
80 |
+
GSM2568776,,18.0,1.0
|
81 |
+
GSM2568777,,21.0,1.0
|
82 |
+
GSM2568778,,21.0,1.0
|
83 |
+
GSM2568779,,21.0,1.0
|
84 |
+
GSM2568780,,21.0,1.0
|
85 |
+
GSM2568781,,21.0,1.0
|
86 |
+
GSM2568782,,18.0,1.0
|
87 |
+
GSM2568783,,18.0,1.0
|
88 |
+
GSM2568784,,18.0,1.0
|
89 |
+
GSM2568785,,18.0,1.0
|
90 |
+
GSM2568786,,18.0,1.0
|
91 |
+
GSM2568787,,19.0,1.0
|
92 |
+
GSM2568788,,19.0,1.0
|
93 |
+
GSM2568789,,19.0,1.0
|
94 |
+
GSM2568790,,19.0,1.0
|
95 |
+
GSM2568791,,19.0,1.0
|
96 |
+
GSM2568792,,19.0,1.0
|
97 |
+
GSM2568793,,19.0,1.0
|
98 |
+
GSM2568794,,19.0,1.0
|
99 |
+
GSM2568795,,19.0,1.0
|
100 |
+
GSM2568796,,19.0,1.0
|
101 |
+
GSM2568797,,61.0,0.0
|
102 |
+
GSM2568798,,61.0,0.0
|
103 |
+
GSM2568799,,61.0,0.0
|
104 |
+
GSM2568800,,61.0,0.0
|
105 |
+
GSM2568801,,61.0,0.0
|
106 |
+
GSM2568802,,45.0,0.0
|
107 |
+
GSM2568803,,45.0,0.0
|
108 |
+
GSM2568804,,45.0,0.0
|
109 |
+
GSM2568805,,45.0,0.0
|
110 |
+
GSM2568806,,49.0,0.0
|
111 |
+
GSM2568807,,49.0,0.0
|
112 |
+
GSM2568808,,49.0,0.0
|
113 |
+
GSM2568809,,49.0,0.0
|
114 |
+
GSM2568810,,49.0,0.0
|
115 |
+
GSM2568811,,19.0,1.0
|
116 |
+
GSM2568812,,20.0,0.0
|
117 |
+
GSM2568813,,20.0,0.0
|
118 |
+
GSM2568814,,20.0,0.0
|
119 |
+
GSM2568815,,20.0,0.0
|
120 |
+
GSM2568816,,20.0,0.0
|
121 |
+
GSM2568817,,20.0,0.0
|
122 |
+
GSM2568818,,20.0,0.0
|
123 |
+
GSM2568819,,20.0,0.0
|
124 |
+
GSM2568820,,20.0,0.0
|
125 |
+
GSM2568821,,20.0,0.0
|
126 |
+
GSM2568822,,29.0,1.0
|
127 |
+
GSM2568823,,29.0,1.0
|
128 |
+
GSM2568824,,29.0,1.0
|
129 |
+
GSM2568825,,29.0,1.0
|
130 |
+
GSM2568826,,29.0,1.0
|
131 |
+
GSM2568827,,39.0,0.0
|
132 |
+
GSM2568828,,39.0,0.0
|
133 |
+
GSM2568829,,39.0,0.0
|
134 |
+
GSM2568830,,39.0,0.0
|
135 |
+
GSM2568831,,39.0,0.0
|
136 |
+
GSM2568832,,19.0,0.0
|
137 |
+
GSM2568833,,19.0,0.0
|
138 |
+
GSM2568834,,19.0,0.0
|
139 |
+
GSM2568835,,19.0,0.0
|
140 |
+
GSM2568836,,25.0,0.0
|
141 |
+
GSM2568837,,25.0,0.0
|
142 |
+
GSM2568838,,25.0,0.0
|
143 |
+
GSM2568839,,25.0,0.0
|
144 |
+
GSM2568840,,25.0,0.0
|
145 |
+
GSM2568841,,26.0,0.0
|
146 |
+
GSM2568842,,26.0,0.0
|
147 |
+
GSM2568843,,26.0,0.0
|
148 |
+
GSM2568844,,26.0,0.0
|
149 |
+
GSM2568845,,26.0,0.0
|
150 |
+
GSM2568846,,28.0,0.0
|
151 |
+
GSM2568847,,28.0,0.0
|
152 |
+
GSM2568848,,28.0,0.0
|
153 |
+
GSM2568849,,28.0,0.0
|
154 |
+
GSM2568850,,28.0,0.0
|
155 |
+
GSM2568851,,26.0,0.0
|
156 |
+
GSM2568852,,26.0,0.0
|
157 |
+
GSM2568853,,26.0,0.0
|
158 |
+
GSM2568854,,26.0,0.0
|
159 |
+
GSM2568855,,26.0,0.0
|
output/preprocess/Height/clinical_data/TCGA.csv
ADDED
@@ -0,0 +1,272 @@
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|
|
|
|
|
|
|
1 |
+
sampleID,Height,Age,Gender
|
2 |
+
TCGA-3B-A9HI-01,1,68,1
|
3 |
+
TCGA-3B-A9HJ-01,1,68,1
|
4 |
+
TCGA-3B-A9HL-01,1,67,1
|
5 |
+
TCGA-3B-A9HO-01,1,75,1
|
6 |
+
TCGA-3B-A9HP-01,1,57,0
|
7 |
+
TCGA-3B-A9HQ-01,1,66,0
|
8 |
+
TCGA-3B-A9HR-01,1,38,0
|
9 |
+
TCGA-3B-A9HS-01,1,60,1
|
10 |
+
TCGA-3B-A9HT-01,1,53,1
|
11 |
+
TCGA-3B-A9HU-01,1,53,0
|
12 |
+
TCGA-3B-A9HV-01,1,48,0
|
13 |
+
TCGA-3B-A9HX-01,1,70,0
|
14 |
+
TCGA-3B-A9HY-01,1,49,1
|
15 |
+
TCGA-3B-A9HZ-01,1,66,1
|
16 |
+
TCGA-3B-A9I0-01,1,33,1
|
17 |
+
TCGA-3B-A9I1-01,1,56,0
|
18 |
+
TCGA-3B-A9I3-01,1,62,1
|
19 |
+
TCGA-3R-A8YX-01,1,66,1
|
20 |
+
TCGA-DX-A1KU-01,1,82,1
|
21 |
+
TCGA-DX-A1KW-01,1,67,1
|
22 |
+
TCGA-DX-A1KX-01,1,67,0
|
23 |
+
TCGA-DX-A1KY-01,1,66,1
|
24 |
+
TCGA-DX-A1KZ-01,1,66,1
|
25 |
+
TCGA-DX-A1L0-01,1,58,1
|
26 |
+
TCGA-DX-A1L1-01,1,60,1
|
27 |
+
TCGA-DX-A1L2-01,1,78,1
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|
output/preprocess/Height/cohort_info.json
ADDED
@@ -0,0 +1,102 @@
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1 |
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{
|
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4 |
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|
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|
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|
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|
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|
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|
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|
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|
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|
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102 |
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output/preprocess/Height/gene_data/GSE101709.csv
ADDED
@@ -0,0 +1,3 @@
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|
1 |
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version https://git-lfs.github.com/spec/v1
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oid sha256:b4aa98212dd0007d265ccef684a3ff0b77bc1c64a4d5e3d9203f851aec4fffc1
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3 |
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size 34315537
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output/preprocess/Height/gene_data/GSE101710.csv
ADDED
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|
1 |
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