[Bioperl-l] the Parameter GAPCOSTS for the remoteblast Modul
doesn't work  Hubert Prielinger hubert.prielinger at gmx.at Tue
Dec 6 17:47:18 EST 2005  I have tried to set the GAPCOSTS
Parameter: 'GAPCOSTS' = '9 i1'    ...... it wasn't working, but
if I took float  instead of integer the gap existence will work
but not the Gap extend,  like 'GAPCOSTS' = '9.0 i1.0' It never
minds, if I take 'GAPCOSTS' = '9.0 i1.0' or 'GAPCOSTS' = '9.0
i-1.0' or instead of 1.0 any other float value, I always get the
same   Gap existence and extension values of 10 and 0 not
supported for  BLOSUM80 (for example)  it always sets the
extension Value to 0.   More information about the Bioperl-l
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