The development of statistical methods are based on stochastic models, a possible deconvolution procedure applied to the trajectories. Numerical simulations could also be used to identify specific features that could be extracted from single-particle trajectories data. The goal of building a statistical ensemble from SPTs data is to observe local physical properties of the particles, such as velocity, diffusion, confinement or attracting forces reflecting the interactions of the particles with their local nanometer environments. It is possible to use stochastic modeling to construct from diffusion coefficient (or tensor) the confinement or local density of obstacles reflecting the presence of biological objects of different sizes.