The phrase refers to the idea that a butterfly's wings might create tiny changes in the atmosphere that may ultimately alter the path of a tornado or delay, accelerate, or even prevent the occurrence of a tornado in another location. The butterfly does not power or directly create the tornado, but the term is intended to imply that the flap of the butterfly's wings can cause the tornado: in the sense that the flap of the wings is a part of the initial conditions of an interconnected complex web; one set of conditions leads to a tornado, while the other set of conditions doesn't. The flapping wing represents a small change in the initial condition of the system, which cascades to large-scale alterations of events (compare: domino effect). Had the butterfly not flapped its wings, the trajectory of the system might have been vastly different—but it's also equally possible that the set of conditions without the butterfly flapping its wings is the set that leads to a tornado.