For nearby objects in the universe, spectral absorption lines are very sharp, as only photons with energies just sufficient to cause an atomic transition can cause that transition. However, the distances between quasars and the telescopes which detect them are large, which means that the expansion of the universe causes light to undergo noticeable redshifting. This means that as light from the quasar travels through the IGM and is redshifted, wavelengths which had been below the Lyman Alpha limit are stretched, and will in effect begin to fill in the Lyman absorption band. This means that instead of showing sharp spectral absorption lines, a quasar's light which has traveled through a large, spread out region of neutral hydrogen will show a Gunn-Peterson trough.