Though some of their amplitudes have opposite phases, both quarks and anti-quarks have positive energy, and hence acquire the same phase as they move in space-time. This phase also depends on their mass, which is identical but depends both on flavor and on the Higgs VEV which changes along the domain wall. Thus certain sums of amplitudes for quarks have different absolute values compared to those of anti-quarks. In all, quarks and anti-quarks may have different reflection and transmission probabilities through the domain wall, and it turns out that more quarks coming from the unbroken phase are transmitted compared to anti-quarks.