{"action":"created","issue":{"url":"https://api.github.com/repos/BIC-MNI/minc-toolkit/issues/34","labels_url":"https://api.github.com/repos/BIC-MNI/minc-toolkit/issues/34/labels{/name}","comments_url":"https://api.github.com/repos/BIC-MNI/minc-toolkit/issues/34/comments","events_url":"https://api.github.com/repos/BIC-MNI/minc-toolkit/issues/34/events","html_url":"https://github.com/BIC-MNI/minc-toolkit/issues/34","id":110933845,"number":34,"title":"does minc-tolkit provide the MNI deps for freesurfer?","user":{"login":"TheChymera","id":950524,"avatar_url":"https://avatars.githubusercontent.com/u/950524?v=3","gravatar_id":"","url":"https://api.github.com/users/TheChymera","html_url":"https://github.com/TheChymera","followers_url":"https://api.github.com/users/TheChymera/followers","following_url":"https://api.github.com/users/TheChymera/following{/other_user}","gists_url":"https://api.github.com/users/TheChymera/gists{/gist_id}","starred_url":"https://api.github.com/users/TheChymera/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/TheChymera/subscriptions","organizations_url":"https://api.github.com/users/TheChymera/orgs","repos_url":"https://api.github.com/users/TheChymera/repos","events_url":"https://api.github.com/users/TheChymera/events{/privacy}","received_events_url":"https://api.github.com/users/TheChymera/received_events","type":"User","site_admin":false},"labels":[],"state":"open","locked":false,"assignee":null,"milestone":null,"comments":5,"created_at":"2015-10-12T08:59:45Z","updated_at":"2015-10-12T22:23:30Z","closed_at":null,"body":"Fresurfer [bundles quite a few of its deps](ftp://surfer.nmr.mgh.harvard.edu/pub/dist/fs_supportlibs/src/).\r\n\r\nMNI is one of them. Does the minc-toolkit provide the same files?"},"comment":{"url":"https://api.github.com/repos/BIC-MNI/minc-toolkit/issues/comments/147537087","html_url":"https://github.com/BIC-MNI/minc-toolkit/issues/34#issuecomment-147537087","issue_url":"https://api.github.com/repos/BIC-MNI/minc-toolkit/issues/34","id":147537087,"user":{"login":"rdvincent","id":1395526,"avatar_url":"https://avatars.githubusercontent.com/u/1395526?v=3","gravatar_id":"","url":"https://api.github.com/users/rdvincent","html_url":"https://github.com/rdvincent","followers_url":"https://api.github.com/users/rdvincent/followers","following_url":"https://api.github.com/users/rdvincent/following{/other_user}","gists_url":"https://api.github.com/users/rdvincent/gists{/gist_id}","starred_url":"https://api.github.com/users/rdvincent/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/rdvincent/subscriptions","organizations_url":"https://api.github.com/users/rdvincent/orgs","repos_url":"https://api.github.com/users/rdvincent/repos","events_url":"https://api.github.com/users/rdvincent/events{/privacy}","received_events_url":"https://api.github.com/users/rdvincent/received_events","type":"User","site_admin":false},"created_at":"2015-10-12T22:23:30Z","updated_at":"2015-10-12T22:23:30Z","body":"Minc-toolkit should contain a version of getopt-tabular. The models are in\na separate Github project, bic-mni-models.\n\nIn any case, I can't recommend using newer MINC tools with FreeSurfer.\nNobody has tested this, to the best of my knowledge.\n\n    -bert\nOn Oct 12, 2015 12:20 PM, \"Horea Christian\" <notifications@github.com>\nwrote:\n\n> @rdvincent <https://github.com/rdvincent> So all the packages I listed\n> are also contained in minc-toolkit (and then some)? For instance I cannot\n> find “Getopt-Tabular” and “MNI models” in the package list of minc-toolkit.\n>\n> —\n> Reply to this email directly or view it on GitHub\n> <https://github.com/BIC-MNI/minc-toolkit/issues/34#issuecomment-147450982>\n> .\n>\n"}}