{"action":"created","issue":{"url":"https://api.github.com/repos/geneontology/synapse/issues/1","labels_url":"https://api.github.com/repos/geneontology/synapse/issues/1/labels{/name}","comments_url":"https://api.github.com/repos/geneontology/synapse/issues/1/comments","events_url":"https://api.github.com/repos/geneontology/synapse/issues/1/events","html_url":"https://github.com/geneontology/synapse/issues/1","id":78033190,"number":1,"title":"Synapse partonomy","user":{"login":"dosumis","id":112839,"avatar_url":"https://avatars.githubusercontent.com/u/112839?v=3","gravatar_id":"","url":"https://api.github.com/users/dosumis","html_url":"https://github.com/dosumis","followers_url":"https://api.github.com/users/dosumis/followers","following_url":"https://api.github.com/users/dosumis/following{/other_user}","gists_url":"https://api.github.com/users/dosumis/gists{/gist_id}","starred_url":"https://api.github.com/users/dosumis/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/dosumis/subscriptions","organizations_url":"https://api.github.com/users/dosumis/orgs","repos_url":"https://api.github.com/users/dosumis/repos","events_url":"https://api.github.com/users/dosumis/events{/privacy}","received_events_url":"https://api.github.com/users/dosumis/received_events","type":"User","site_admin":false},"labels":[],"state":"open","locked":false,"assignee":{"login":"dosumis","id":112839,"avatar_url":"https://avatars.githubusercontent.com/u/112839?v=3","gravatar_id":"","url":"https://api.github.com/users/dosumis","html_url":"https://github.com/dosumis","followers_url":"https://api.github.com/users/dosumis/followers","following_url":"https://api.github.com/users/dosumis/following{/other_user}","gists_url":"https://api.github.com/users/dosumis/gists{/gist_id}","starred_url":"https://api.github.com/users/dosumis/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/dosumis/subscriptions","organizations_url":"https://api.github.com/users/dosumis/orgs","repos_url":"https://api.github.com/users/dosumis/repos","events_url":"https://api.github.com/users/dosumis/events{/privacy}","received_events_url":"https://api.github.com/users/dosumis/received_events","type":"User","site_admin":false},"milestone":{"url":"https://api.github.com/repos/geneontology/synapse/milestones/2","html_url":"https://github.com/geneontology/synapse/milestones/synapse%20structure%20terms%20fit%20for%20annotation","labels_url":"https://api.github.com/repos/geneontology/synapse/milestones/2/labels","id":1151069,"number":2,"title":"synapse structure terms fit for annotation","description":"Date by which synapse structure terms should be of a quality sufficient for annotation to start.","creator":{"login":"dosumis","id":112839,"avatar_url":"https://avatars.githubusercontent.com/u/112839?v=3","gravatar_id":"","url":"https://api.github.com/users/dosumis","html_url":"https://github.com/dosumis","followers_url":"https://api.github.com/users/dosumis/followers","following_url":"https://api.github.com/users/dosumis/following{/other_user}","gists_url":"https://api.github.com/users/dosumis/gists{/gist_id}","starred_url":"https://api.github.com/users/dosumis/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/dosumis/subscriptions","organizations_url":"https://api.github.com/users/dosumis/orgs","repos_url":"https://api.github.com/users/dosumis/repos","events_url":"https://api.github.com/users/dosumis/events{/privacy}","received_events_url":"https://api.github.com/users/dosumis/received_events","type":"User","site_admin":false},"open_issues":9,"closed_issues":0,"state":"open","created_at":"2015-06-05T12:34:39Z","updated_at":"2015-06-15T11:18:35Z","due_on":"2015-06-29T23:00:00Z","closed_at":null},"comments":10,"created_at":"2015-05-19T10:39:37Z","updated_at":"2015-06-15T13:24:00Z","closed_at":null,"body":"Synapse partonomy is incomplete, and obscured via inference from 'synapse part' parent. This should be fixed to => a complete, asserted partonomy, clearly distinguishing pre from post-synapse. Missing terms in italics.\r\n\r\n+Pimmelorus suggested partonomy (new terms in italics)\r\n\r\nsynapse            \r\n*   *presynapse*        \r\n    *   presynaptic periactive zone    \r\n    *   presynaptic active zone    \r\n          *  presynaptic active zone dense projection\r\n          *  presynaptic active zone membrane\r\n          *  presynaptic cytoskeletal matrix assembled at active zones    \r\n          *  presynaptic grid\r\n    *    synaptic vesicle    \r\n         *   synaptic vesicle lumen\r\n         *   synaptic vesicle membrane\r\n  *  presynaptic membrane        \r\n  *  *presynaptic endosome*       \r\n  *  *presynaptic SER*        \r\n  *  *presynaptic endocytic zone*         \r\n* synaptic cleft            \r\n* *postsynapse*            \r\n     *  postsynaptic density        \r\n     *  postsynaptic membrane        \r\n     *  *postsynaptic cytoskeleton in spine*        \r\n     *  *postsynaptic endosome*       \r\n     *  *postsynaptic spine apparatus*\r\n     *  *postsynaptic SER*\r\n     *  *postsynaptic Golgi-cisternal*\r\n                       \r\nmitochondrion\r\n   *   *presynaptic mitochondrion*\r\n   *   *postsynaptic mitochondrion*"},"comment":{"url":"https://api.github.com/repos/geneontology/synapse/issues/comments/112068851","html_url":"https://github.com/geneontology/synapse/issues/1#issuecomment-112068851","issue_url":"https://api.github.com/repos/geneontology/synapse/issues/1","id":112068851,"user":{"login":"dosumis","id":112839,"avatar_url":"https://avatars.githubusercontent.com/u/112839?v=3","gravatar_id":"","url":"https://api.github.com/users/dosumis","html_url":"https://github.com/dosumis","followers_url":"https://api.github.com/users/dosumis/followers","following_url":"https://api.github.com/users/dosumis/following{/other_user}","gists_url":"https://api.github.com/users/dosumis/gists{/gist_id}","starred_url":"https://api.github.com/users/dosumis/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/dosumis/subscriptions","organizations_url":"https://api.github.com/users/dosumis/orgs","repos_url":"https://api.github.com/users/dosumis/repos","events_url":"https://api.github.com/users/dosumis/events{/privacy}","received_events_url":"https://api.github.com/users/dosumis/received_events","type":"User","site_admin":false},"created_at":"2015-06-15T13:24:00Z","updated_at":"2015-06-15T13:24:00Z","body":"TBD: Should postsynapse include all contents of dendritic spine, or be more focussed?  Note: would be good to avoid having radically different boundary criteria for vertebrates vs arthropods, where, to my knowledge, there are no dendritic spines."}}