{"action":"opened","issue":{"url":"https://api.github.com/repos/CellProfiler/CellProfiler/issues/1611","labels_url":"https://api.github.com/repos/CellProfiler/CellProfiler/issues/1611/labels{/name}","comments_url":"https://api.github.com/repos/CellProfiler/CellProfiler/issues/1611/comments","events_url":"https://api.github.com/repos/CellProfiler/CellProfiler/issues/1611/events","html_url":"https://github.com/CellProfiler/CellProfiler/issues/1611","id":109414185,"number":1611,"title":"Need to resubmit some cluster jobs","user":{"login":"dlogan","id":1225595,"avatar_url":"https://avatars.githubusercontent.com/u/1225595?v=3","gravatar_id":"","url":"https://api.github.com/users/dlogan","html_url":"https://github.com/dlogan","followers_url":"https://api.github.com/users/dlogan/followers","following_url":"https://api.github.com/users/dlogan/following{/other_user}","gists_url":"https://api.github.com/users/dlogan/gists{/gist_id}","starred_url":"https://api.github.com/users/dlogan/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/dlogan/subscriptions","organizations_url":"https://api.github.com/users/dlogan/orgs","repos_url":"https://api.github.com/users/dlogan/repos","events_url":"https://api.github.com/users/dlogan/events{/privacy}","received_events_url":"https://api.github.com/users/dlogan/received_events","type":"User","site_admin":false},"labels":[{"url":"https://api.github.com/repos/CellProfiler/CellProfiler/labels/Bug","name":"Bug","color":"e10c02"},{"url":"https://api.github.com/repos/CellProfiler/CellProfiler/labels/Mac","name":"Mac","color":"000000"}],"state":"open","locked":false,"assignee":{"login":"0x00B1","id":315821,"avatar_url":"https://avatars.githubusercontent.com/u/315821?v=3","gravatar_id":"","url":"https://api.github.com/users/0x00B1","html_url":"https://github.com/0x00B1","followers_url":"https://api.github.com/users/0x00B1/followers","following_url":"https://api.github.com/users/0x00B1/following{/other_user}","gists_url":"https://api.github.com/users/0x00B1/gists{/gist_id}","starred_url":"https://api.github.com/users/0x00B1/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/0x00B1/subscriptions","organizations_url":"https://api.github.com/users/0x00B1/orgs","repos_url":"https://api.github.com/users/0x00B1/repos","events_url":"https://api.github.com/users/0x00B1/events{/privacy}","received_events_url":"https://api.github.com/users/0x00B1/received_events","type":"User","site_admin":false},"milestone":{"url":"https://api.github.com/repos/CellProfiler/CellProfiler/milestones/1","html_url":"https://github.com/CellProfiler/CellProfiler/milestones/CellProfiler%202.1.2%20","labels_url":"https://api.github.com/repos/CellProfiler/CellProfiler/milestones/1/labels","id":493817,"number":1,"title":"CellProfiler 2.1.2 ","description":"Mentioned in the NIH CellProfiler R01, year 4.","creator":{"login":"AnneCarpenter","id":1213811,"avatar_url":"https://avatars.githubusercontent.com/u/1213811?v=3","gravatar_id":"","url":"https://api.github.com/users/AnneCarpenter","html_url":"https://github.com/AnneCarpenter","followers_url":"https://api.github.com/users/AnneCarpenter/followers","following_url":"https://api.github.com/users/AnneCarpenter/following{/other_user}","gists_url":"https://api.github.com/users/AnneCarpenter/gists{/gist_id}","starred_url":"https://api.github.com/users/AnneCarpenter/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/AnneCarpenter/subscriptions","organizations_url":"https://api.github.com/users/AnneCarpenter/orgs","repos_url":"https://api.github.com/users/AnneCarpenter/repos","events_url":"https://api.github.com/users/AnneCarpenter/events{/privacy}","received_events_url":"https://api.github.com/users/AnneCarpenter/received_events","type":"User","site_admin":false},"open_issues":43,"closed_issues":70,"state":"open","created_at":"2013-11-22T15:38:38Z","updated_at":"2015-10-02T01:15:26Z","due_on":null,"closed_at":null},"comments":0,"created_at":"2015-10-02T01:15:26Z","updated_at":"2015-10-02T01:15:26Z","closed_at":null,"body":"I raised the Java heap allocation in Preferences to 4000 (MB).  Then on launch of the Dev CP on Mac, I got this RunTimeError:\r\n\r\n```\r\n[dlogan@wme2f-11a:~]$ /Users/dlogan/github/CellProfiler_dev_python.command ; exit;\r\nUpdating Java dependencies using Maven.\r\nrunning build_ext\r\nskipping '_cpmorphology2.c' Cython extension (up-to-date)\r\nskipping '_watershed.c' Cython extension (up-to-date)\r\nskipping '_propagate.c' Cython extension (up-to-date)\r\nskipping '_filter.c' Cython extension (up-to-date)\r\nskipping '_lapjv.c' Cython extension (up-to-date)\r\nskipping '_convex_hull.c' Cython extension (up-to-date)\r\nskipping '_fastemd.cpp' Cython extension (up-to-date)\r\nError occurred during initialization of VM\r\nCould not reserve enough space for object heap\r\nFailed to create Java virtual machine.\r\n\r\nTraceback (most recent call last):\r\n  File \"/Users/dlogan/github/CPhomebrew/Cellar/cellprofiler-dev-python/1/cpdev/lib/python2.7/site-packages/javabridge/jutil.py\", line 222, in start_thread\r\n    vm.create_mac(args, RQCLS)\r\n  File \"_javabridge.pyx\", line 638, in _javabridge.JB_VM.create_mac (_javabridge.c:6184)\r\nRuntimeError: Failed to create Java VM. Return code = -4\r\nFailed to create Java VM\r\nTraceback (most recent call last):\r\n  File \"/Users/dlogan/github/CellProfiler/CellProfiler.py\", line 987, in <module>\r\n    main(sys.argv)\r\n  File \"/Users/dlogan/github/CellProfiler/CellProfiler.py\", line 200, in main\r\n    cp_start_vm()\r\n  File \"/Users/dlogan/github/CellProfiler/cellprofiler/utilities/cpjvm.py\", line 174, in cp_start_vm\r\n    max_heap_size = heap_size)\r\n  File \"/Users/dlogan/github/CPhomebrew/Cellar/cellprofiler-dev-python/1/cpdev/lib/python2.7/site-packages/javabridge/jutil.py\", line 259, in start_vm\r\n    raise RuntimeError(\"Failed to start Java VM\")\r\nRuntimeError: Failed to start Java VM\r\nlogout\r\n```\r\n\r\n(Assigning to Allen, but feel free to re-assign to Lee.)"}}