{"action":"created","issue":{"url":"https://api.github.com/repos/monarch-initiative/dipper/issues/12","labels_url":"https://api.github.com/repos/monarch-initiative/dipper/issues/12/labels{/name}","comments_url":"https://api.github.com/repos/monarch-initiative/dipper/issues/12/comments","events_url":"https://api.github.com/repos/monarch-initiative/dipper/issues/12/events","html_url":"https://github.com/monarch-initiative/dipper/issues/12","id":49734027,"number":12,"title":"add data source zfin","user":{"login":"nlwashington","id":5124411,"avatar_url":"https://avatars.githubusercontent.com/u/5124411?v=3","gravatar_id":"","url":"https://api.github.com/users/nlwashington","html_url":"https://github.com/nlwashington","followers_url":"https://api.github.com/users/nlwashington/followers","following_url":"https://api.github.com/users/nlwashington/following{/other_user}","gists_url":"https://api.github.com/users/nlwashington/gists{/gist_id}","starred_url":"https://api.github.com/users/nlwashington/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/nlwashington/subscriptions","organizations_url":"https://api.github.com/users/nlwashington/orgs","repos_url":"https://api.github.com/users/nlwashington/repos","events_url":"https://api.github.com/users/nlwashington/events{/privacy}","received_events_url":"https://api.github.com/users/nlwashington/received_events","type":"User","site_admin":false},"labels":[{"url":"https://api.github.com/repos/monarch-initiative/dipper/labels/data","name":"data","color":"d4c5f9"},{"url":"https://api.github.com/repos/monarch-initiative/dipper/labels/zfin","name":"zfin","color":"dd7aea"}],"state":"open","locked":false,"assignee":{"login":"bryanlaraway","id":5770358,"avatar_url":"https://avatars.githubusercontent.com/u/5770358?v=3","gravatar_id":"","url":"https://api.github.com/users/bryanlaraway","html_url":"https://github.com/bryanlaraway","followers_url":"https://api.github.com/users/bryanlaraway/followers","following_url":"https://api.github.com/users/bryanlaraway/following{/other_user}","gists_url":"https://api.github.com/users/bryanlaraway/gists{/gist_id}","starred_url":"https://api.github.com/users/bryanlaraway/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/bryanlaraway/subscriptions","organizations_url":"https://api.github.com/users/bryanlaraway/orgs","repos_url":"https://api.github.com/users/bryanlaraway/repos","events_url":"https://api.github.com/users/bryanlaraway/events{/privacy}","received_events_url":"https://api.github.com/users/bryanlaraway/received_events","type":"User","site_admin":false},"milestone":{"url":"https://api.github.com/repos/monarch-initiative/dipper/milestones/2","html_url":"https://github.com/monarch-initiative/dipper/milestones/Flip%20switch%20from%20Disco-%3EDipper","labels_url":"https://api.github.com/repos/monarch-initiative/dipper/milestones/2/labels","id":924463,"number":2,"title":"Flip switch from Disco->Dipper","description":"We will make a complete switchover from the Disco scheduler to Dipper for the sources that drive our current website (http://monarchinitiative.org/sources):\r\nBiogrid, ClinVar, Coriell, CTD, FlyBase, HPO, IMPC, KEGG, MGI, MPD, NCBI (Gene, Pub2Gene), OMIA, OMIM, Orphanet, Panther, Wormbase, ZFIN.\r\nThe switchover will also include running this off of Jenkins.","creator":{"login":"nlwashington","id":5124411,"avatar_url":"https://avatars.githubusercontent.com/u/5124411?v=3","gravatar_id":"","url":"https://api.github.com/users/nlwashington","html_url":"https://github.com/nlwashington","followers_url":"https://api.github.com/users/nlwashington/followers","following_url":"https://api.github.com/users/nlwashington/following{/other_user}","gists_url":"https://api.github.com/users/nlwashington/gists{/gist_id}","starred_url":"https://api.github.com/users/nlwashington/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/nlwashington/subscriptions","organizations_url":"https://api.github.com/users/nlwashington/orgs","repos_url":"https://api.github.com/users/nlwashington/repos","events_url":"https://api.github.com/users/nlwashington/events{/privacy}","received_events_url":"https://api.github.com/users/nlwashington/received_events","type":"User","site_admin":false},"open_issues":29,"closed_issues":14,"state":"open","created_at":"2015-01-06T21:03:38Z","updated_at":"2015-05-03T17:08:39Z","due_on":"2015-05-01T07:00:00Z","closed_at":null},"comments":20,"created_at":"2014-11-21T18:52:40Z","updated_at":"2015-05-12T20:42:55Z","closed_at":null,"body":"add zfin geno-pheno data:\r\nhttp://www.zfin.org/downloads\r\n\r\nwe currently take in the:\r\nhttp://zfin.org/downloads/Morpholinos.txt\r\nhttp://zfin.org/Downloads/phenotype.txt\r\nhttp://zfin.org/Downloads/pheno_environment.txt\r\nhttp://zfin.org/Downloads/stage_ontology.txt\r\nhttp://zfin.org/Downloads/anatomy_item.txt\r\nhttp://zfin.org/Downloads/wildtype-expression.txt\r\nhttp://zfin.org/downloads/mappings.txt\r\nhttp://zfin.org/downloads/genotype_backgrounds.txt\r\nhttp://zfin.org/downloads/genbank.txt\r\nhttp://zfin.org/downloads/uniprot.txt\r\nhttp://zfin.org/downloads/gene.txt\r\nhttp://zfin.org/downloads/wildtypes.txt\r\nhttp://zfin.org/downloads/genotype_features.txt\r\nhttp://zfin.org/downloads/human_orthos.txt\r\nhttp://zfin.org/zf_info/dbase/cont.html\r\n\r\n"},"comment":{"url":"https://api.github.com/repos/monarch-initiative/dipper/issues/comments/101413895","html_url":"https://github.com/monarch-initiative/dipper/issues/12#issuecomment-101413895","issue_url":"https://api.github.com/repos/monarch-initiative/dipper/issues/12","id":101413895,"user":{"login":"nlwashington","id":5124411,"avatar_url":"https://avatars.githubusercontent.com/u/5124411?v=3","gravatar_id":"","url":"https://api.github.com/users/nlwashington","html_url":"https://github.com/nlwashington","followers_url":"https://api.github.com/users/nlwashington/followers","following_url":"https://api.github.com/users/nlwashington/following{/other_user}","gists_url":"https://api.github.com/users/nlwashington/gists{/gist_id}","starred_url":"https://api.github.com/users/nlwashington/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/nlwashington/subscriptions","organizations_url":"https://api.github.com/users/nlwashington/orgs","repos_url":"https://api.github.com/users/nlwashington/repos","events_url":"https://api.github.com/users/nlwashington/events{/privacy}","received_events_url":"https://api.github.com/users/nlwashington/received_events","type":"User","site_admin":false},"created_at":"2015-05-12T20:42:55Z","updated_at":"2015-05-12T20:42:55Z","body":"@drseb or @cmungall where do i get the new zp.annot?  do i use output from a jenkins run as before?  do i need to run the java commands myself?"}}