{"action":"closed","issue":{"url":"https://api.github.com/repos/EdinburghGenomics/Analysis-Driver/issues/26","labels_url":"https://api.github.com/repos/EdinburghGenomics/Analysis-Driver/issues/26/labels{/name}","comments_url":"https://api.github.com/repos/EdinburghGenomics/Analysis-Driver/issues/26/comments","events_url":"https://api.github.com/repos/EdinburghGenomics/Analysis-Driver/issues/26/events","html_url":"https://github.com/EdinburghGenomics/Analysis-Driver/issues/26","id":100574505,"number":26,"title":"Script writer modularity","user":{"login":"mwhamgenomics","id":12951686,"avatar_url":"https://avatars.githubusercontent.com/u/12951686?v=3","gravatar_id":"","url":"https://api.github.com/users/mwhamgenomics","html_url":"https://github.com/mwhamgenomics","followers_url":"https://api.github.com/users/mwhamgenomics/followers","following_url":"https://api.github.com/users/mwhamgenomics/following{/other_user}","gists_url":"https://api.github.com/users/mwhamgenomics/gists{/gist_id}","starred_url":"https://api.github.com/users/mwhamgenomics/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/mwhamgenomics/subscriptions","organizations_url":"https://api.github.com/users/mwhamgenomics/orgs","repos_url":"https://api.github.com/users/mwhamgenomics/repos","events_url":"https://api.github.com/users/mwhamgenomics/events{/privacy}","received_events_url":"https://api.github.com/users/mwhamgenomics/received_events","type":"User","site_admin":false},"labels":[{"url":"https://api.github.com/repos/EdinburghGenomics/Analysis-Driver/labels/enhancement","name":"enhancement","color":"bfe5bf"}],"state":"closed","locked":false,"assignee":null,"milestone":null,"comments":0,"created_at":"2015-08-12T15:48:29Z","updated_at":"2015-08-19T12:43:02Z","closed_at":"2015-08-19T12:43:02Z","body":"At the moment, the bcl2fastq/fastqc/bcbio writers are specific to PBS. We should instead have a PBS base class and bcl2fastq/fastqc/bcbio helper classes that return string Bash commands. This should make it easier to port to other grid engines."}}