{"action":"created","issue":{"url":"https://api.github.com/repos/WormBase/website/issues/4247","labels_url":"https://api.github.com/repos/WormBase/website/issues/4247/labels{/name}","comments_url":"https://api.github.com/repos/WormBase/website/issues/4247/comments","events_url":"https://api.github.com/repos/WormBase/website/issues/4247/events","html_url":"https://github.com/WormBase/website/issues/4247","id":109961951,"number":4247,"title":"Request for change to the Gene Overview widget when it is a Pseudogene","user":{"login":"gw3","id":893224,"avatar_url":"https://avatars.githubusercontent.com/u/893224?v=3","gravatar_id":"","url":"https://api.github.com/users/gw3","html_url":"https://github.com/gw3","followers_url":"https://api.github.com/users/gw3/followers","following_url":"https://api.github.com/users/gw3/following{/other_user}","gists_url":"https://api.github.com/users/gw3/gists{/gist_id}","starred_url":"https://api.github.com/users/gw3/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/gw3/subscriptions","organizations_url":"https://api.github.com/users/gw3/orgs","repos_url":"https://api.github.com/users/gw3/repos","events_url":"https://api.github.com/users/gw3/events{/privacy}","received_events_url":"https://api.github.com/users/gw3/received_events","type":"User","site_admin":false},"labels":[{"url":"https://api.github.com/repos/WormBase/website/labels/feature%20request","name":"feature request","color":"02d7e1"},{"url":"https://api.github.com/repos/WormBase/website/labels/UI-data%20display","name":"UI-data display","color":"02e10c"},{"url":"https://api.github.com/repos/WormBase/website/labels/Webteam","name":"Webteam","color":"a369e7"}],"state":"open","locked":false,"assignee":null,"milestone":null,"comments":9,"created_at":"2015-10-06T08:45:51Z","updated_at":"2015-10-12T16:05:34Z","closed_at":null,"body":"There has been a discussion on the wormbase-genenames mailing list about the display of Gene information when the Gene is a Pseudogene.\r\n\r\nIt is not as obvious as it might be to users when looking on the gene page that the gene is a Pseudogene and the Remark for Pseudogenes is rather uninformative.\r\n\r\nThe box in the Overview widget does state when the gene is a Pseudogene, but this is not very noticeable.\r\n\r\nMany Pseudogenes have the same rather uninformative block of text in their 'Remark':\r\n\"Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.\" \r\n\r\nThe suggestion is that \r\n     - the Overview widget display the word 'Pseudogene' prominently.\r\n     - the 'Remarks' text be collapsed by default in Pseudogenes as we think it distracts the user. \r\n\r\nSo the Overview for Pseudogenes would look like:\r\n(The box on the right in the Overview widget should still be there, unchanged, but I can't easily indicate it using just text)\r\n\r\n-------------------------------------------------------------\r\n\r\nOverview\r\nabt-3 (ABC Transporter family )\r\n\r\nPseudogene\r\n\r\nRemarks:\r\n\r\n-------------------------------------------------------------"},"comment":{"url":"https://api.github.com/repos/WormBase/website/issues/comments/147447381","html_url":"https://github.com/WormBase/website/issues/4247#issuecomment-147447381","issue_url":"https://api.github.com/repos/WormBase/website/issues/4247","id":147447381,"user":{"login":"tharris","id":74888,"avatar_url":"https://avatars.githubusercontent.com/u/74888?v=3","gravatar_id":"","url":"https://api.github.com/users/tharris","html_url":"https://github.com/tharris","followers_url":"https://api.github.com/users/tharris/followers","following_url":"https://api.github.com/users/tharris/following{/other_user}","gists_url":"https://api.github.com/users/tharris/gists{/gist_id}","starred_url":"https://api.github.com/users/tharris/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/tharris/subscriptions","organizations_url":"https://api.github.com/users/tharris/orgs","repos_url":"https://api.github.com/users/tharris/repos","events_url":"https://api.github.com/users/tharris/events{/privacy}","received_events_url":"https://api.github.com/users/tharris/received_events","type":"User","site_admin":false},"created_at":"2015-10-12T16:05:34Z","updated_at":"2015-10-12T16:05:34Z","body":"What I'm saying is that I don't believe the presentation layer shouldn't be responsible for classifying data. The type of a gene is a perfect example of this. \r\n\r\nBack to the issue at hand:\r\n\r\nWe will append the type of a gene (for Psuedogenes ONLY) to the description of the gene in the overview."}}