{"action":"created","comment":{"url":"https://api.github.com/repos/nilearn/nilearn/pulls/comments/35497700","id":35497700,"diff_hunk":"@@ -0,0 +1,232 @@\n+\"\"\"\n+region_extractor\n+\"\"\"\n+\n+import nibabel\n+import numpy as np\n+\n+from scipy.ndimage import label\n+\n+from skimage.feature import peak_local_max\n+from skimage.segmentation import random_walker\n+\n+from nilearn import plotting\n+from nilearn._utils import check_niimg\n+from nilearn._utils.extmath import fast_abs_percentile\n+from nilearn.image import iter_img, new_img_like\n+from nilearn.image.image import _smooth_array\n+from nilearn._utils.niimg_conversions import concat_niimgs\n+from nilearn._utils.compat import _basestring\n+\n+\n+def extract_seperate_regions(img, img_data, min_size):","path":"nilearn/region_extraction/regionextractor.py","position":22,"original_position":22,"commit_id":"01aa8030f5ba429c195a2df1e8d0dc52a02817a9","original_commit_id":"01aa8030f5ba429c195a2df1e8d0dc52a02817a9","user":{"login":"AlexandreAbraham","id":1647301,"avatar_url":"https://avatars.githubusercontent.com/u/1647301?v=3","gravatar_id":"","url":"https://api.github.com/users/AlexandreAbraham","html_url":"https://github.com/AlexandreAbraham","followers_url":"https://api.github.com/users/AlexandreAbraham/followers","following_url":"https://api.github.com/users/AlexandreAbraham/following{/other_user}","gists_url":"https://api.github.com/users/AlexandreAbraham/gists{/gist_id}","starred_url":"https://api.github.com/users/AlexandreAbraham/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/AlexandreAbraham/subscriptions","organizations_url":"https://api.github.com/users/AlexandreAbraham/orgs","repos_url":"https://api.github.com/users/AlexandreAbraham/repos","events_url":"https://api.github.com/users/AlexandreAbraham/events{/privacy}","received_events_url":"https://api.github.com/users/AlexandreAbraham/received_events","type":"User","site_admin":false},"body":"Typo: separate. Also, you could just name it `extract_regions`.","created_at":"2015-07-26T21:07:18Z","updated_at":"2015-07-26T21:07:18Z","html_url":"https://github.com/nilearn/nilearn/pull/651#discussion_r35497700","pull_request_url":"https://api.github.com/repos/nilearn/nilearn/pulls/651","_links":{"self":{"href":"https://api.github.com/repos/nilearn/nilearn/pulls/comments/35497700"},"html":{"href":"https://github.com/nilearn/nilearn/pull/651#discussion_r35497700"},"pull_request":{"href":"https://api.github.com/repos/nilearn/nilearn/pulls/651"}}},"pull_request":{"url":"https://api.github.com/repos/nilearn/nilearn/pulls/651","id":39828251,"html_url":"https://github.com/nilearn/nilearn/pull/651","diff_url":"https://github.com/nilearn/nilearn/pull/651.diff","patch_url":"https://github.com/nilearn/nilearn/pull/651.patch","issue_url":"https://api.github.com/repos/nilearn/nilearn/issues/651","number":651,"state":"open","locked":false,"title":"[WIP] Region Extractor","user":{"login":"KamalakerDadi","id":11410385,"avatar_url":"https://avatars.githubusercontent.com/u/11410385?v=3","gravatar_id":"","url":"https://api.github.com/users/KamalakerDadi","html_url":"https://github.com/KamalakerDadi","followers_url":"https://api.github.com/users/KamalakerDadi/followers","following_url":"https://api.github.com/users/KamalakerDadi/following{/other_user}","gists_url":"https://api.github.com/users/KamalakerDadi/gists{/gist_id}","starred_url":"https://api.github.com/users/KamalakerDadi/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/KamalakerDadi/subscriptions","organizations_url":"https://api.github.com/users/KamalakerDadi/orgs","repos_url":"https://api.github.com/users/KamalakerDadi/repos","events_url":"https://api.github.com/users/KamalakerDadi/events{/privacy}","received_events_url":"https://api.github.com/users/KamalakerDadi/received_events","type":"User","site_admin":false},"body":"Fix #633 \r\nTo Do List:\r\n- [x] Foreground Extraction and Biggest Connected Component\r\n    - [x] Voxel Ratio Extractor\r\n- [x] Region Extraction\r\n    - [x] Random Walker Extraction\r\n- [ ] Documentation\r\n- [ ] Tests\r\n- [ ] Example\r\n\r\nTo be followed are in the To Do List\r\nAt the moment, I wrote simple lines of documentation not carefully considered.\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n","created_at":"2015-07-13T16:08:17Z","updated_at":"2015-07-26T21:07:18Z","closed_at":null,"merged_at":null,"merge_commit_sha":"b88d6872ca60657f8d5f9edf6ba1b68417b881f3","assignee":null,"milestone":null,"commits_url":"https://api.github.com/repos/nilearn/nilearn/pulls/651/commits","review_comments_url":"https://api.github.com/repos/nilearn/nilearn/pulls/651/comments","review_comment_url":"https://api.github.com/repos/nilearn/nilearn/pulls/comments{/number}","comments_url":"https://api.github.com/repos/nilearn/nilearn/issues/651/comments","statuses_url":"https://api.github.com/repos/nilearn/nilearn/statuses/01aa8030f5ba429c195a2df1e8d0dc52a02817a9","head":{"label":"KamalakerDadi:AutoExtractor","ref":"AutoExtractor","sha":"01aa8030f5ba429c195a2df1e8d0dc52a02817a9","user":{"login":"KamalakerDadi","id":11410385,"avatar_url":"https://avatars.githubusercontent.com/u/11410385?v=3","gravatar_id":"","url":"https://api.github.com/users/KamalakerDadi","html_url":"https://github.com/KamalakerDadi","followers_url":"https://api.github.com/users/KamalakerDadi/followers","following_url":"https://api.github.com/users/KamalakerDadi/following{/other_user}","gists_url":"https://api.github.com/users/KamalakerDadi/gists{/gist_id}","starred_url":"https://api.github.com/users/KamalakerDadi/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/KamalakerDadi/subscriptions","organizations_url":"https://api.github.com/users/KamalakerDadi/orgs","repos_url":"https://api.github.com/users/KamalakerDadi/repos","events_url":"https://api.github.com/users/KamalakerDadi/events{/privacy}","received_events_url":"https://api.github.com/users/KamalakerDadi/received_events","type":"User","site_admin":false},"repo":{"id":32379132,"name":"nilearn","full_name":"KamalakerDadi/nilearn","owner":{"login":"KamalakerDadi","id":11410385,"avatar_url":"https://avatars.githubusercontent.com/u/11410385?v=3","gravatar_id":"","url":"https://api.github.com/users/KamalakerDadi","html_url":"https://github.com/KamalakerDadi","followers_url":"https://api.github.com/users/KamalakerDadi/followers","following_url":"https://api.github.com/users/KamalakerDadi/following{/other_user}","gists_url":"https://api.github.com/users/KamalakerDadi/gists{/gist_id}","starred_url":"https://api.github.com/users/KamalakerDadi/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/KamalakerDadi/subscriptions","organizations_url":"https://api.github.com/users/KamalakerDadi/orgs","repos_url":"https://api.github.com/users/KamalakerDadi/repos","events_url":"https://api.github.com/users/KamalakerDadi/events{/privacy}","received_events_url":"https://api.github.com/users/KamalakerDadi/received_events","type":"User","site_admin":false},"private":false,"html_url":"https://github.com/KamalakerDadi/nilearn","description":"Machine 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