{"action":"created","issue":{"url":"https://api.github.com/repos/swirldev/swirl/issues/107","labels_url":"https://api.github.com/repos/swirldev/swirl/issues/107/labels{/name}","comments_url":"https://api.github.com/repos/swirldev/swirl/issues/107/comments","events_url":"https://api.github.com/repos/swirldev/swirl/issues/107/events","html_url":"https://github.com/swirldev/swirl/issues/107","id":29063281,"number":107,"title":"Error in file(con, \"r\") : invalid 'description' argument","user":{"login":"emsweene","id":1934509,"avatar_url":"https://avatars.githubusercontent.com/u/1934509?v=3","gravatar_id":"","url":"https://api.github.com/users/emsweene","html_url":"https://github.com/emsweene","followers_url":"https://api.github.com/users/emsweene/followers","following_url":"https://api.github.com/users/emsweene/following{/other_user}","gists_url":"https://api.github.com/users/emsweene/gists{/gist_id}","starred_url":"https://api.github.com/users/emsweene/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/emsweene/subscriptions","organizations_url":"https://api.github.com/users/emsweene/orgs","repos_url":"https://api.github.com/users/emsweene/repos","events_url":"https://api.github.com/users/emsweene/events{/privacy}","received_events_url":"https://api.github.com/users/emsweene/received_events","type":"User","site_admin":false},"labels":[],"state":"closed","locked":false,"assignee":null,"milestone":null,"comments":21,"created_at":"2014-03-09T21:34:12Z","updated_at":"2015-04-27T21:34:03Z","closed_at":"2015-03-03T18:48:28Z","body":"I have created my own module.  When I run it the first time, it runs perfectly.  When I try again I always get the output: \r\n\r\n\r\nError in file(con, \"r\") : invalid 'description' argument\r\n\r\n| Leaving swirl now. Type swirl() to resume.\r\n\r\nI'\r\nm unable to get the module to work unless I delete the lesson, create a new one, and copy all of the code into this.   Then it will work the first time I run it and then fail again.  I'm using a Mac \r\n\r\n\r\nsessionInfo()\r\nR version 3.0.2 (2013-09-25)\r\nPlatform: x86_64-apple-darwin10.8.0 (64-bit)\r\n\r\nlocale:\r\n[1] en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/C/en_US.UTF-8/en_US.UTF-8\r\n\r\nattached base packages:\r\n[1] stats     graphics  grDevices utils     datasets  methods   base     \r\n\r\nother attached packages:\r\n[1] RColorBrewer_1.0-5 swirl_2.1.1       \r\n\r\nloaded via a namespace (and not attached):\r\n [1] digest_0.6.4   httr_0.2       openintro_1.4  plotrix_3.5-3  pwr_1.1.1     \r\n [6] RCurl_1.95-4.1 stringr_0.6.2  testthat_0.8.1 tools_3.0.2    whisker_0.3-2 \r\n[11] yaml_2.1.10 \r\n\r\nThanks! \r\nElizabeth \r\n\r\n"},"comment":{"url":"https://api.github.com/repos/swirldev/swirl/issues/comments/96828211","html_url":"https://github.com/swirldev/swirl/issues/107#issuecomment-96828211","issue_url":"https://api.github.com/repos/swirldev/swirl/issues/107","id":96828211,"user":{"login":"Oriehi","id":12143529,"avatar_url":"https://avatars.githubusercontent.com/u/12143529?v=3","gravatar_id":"","url":"https://api.github.com/users/Oriehi","html_url":"https://github.com/Oriehi","followers_url":"https://api.github.com/users/Oriehi/followers","following_url":"https://api.github.com/users/Oriehi/following{/other_user}","gists_url":"https://api.github.com/users/Oriehi/gists{/gist_id}","starred_url":"https://api.github.com/users/Oriehi/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/Oriehi/subscriptions","organizations_url":"https://api.github.com/users/Oriehi/orgs","repos_url":"https://api.github.com/users/Oriehi/repos","events_url":"https://api.github.com/users/Oriehi/events{/privacy}","received_events_url":"https://api.github.com/users/Oriehi/received_events","type":"User","site_admin":false},"created_at":"2015-04-27T21:34:03Z","updated_at":"2015-04-27T21:34:03Z","body":"Hello everyone, am new to R and am interested in working with mass spect data on CM10 chips at 1800 energy level to predict possible proteins that could be represented in a sample analysis.\r\nQuestions\r\n1. Has any one done anything in this direction?\r\n2. How do I bring in the CSV file into R bioconductor then analyze the data contained in the CSV file and relate it to a protein database? \r\n3. Which protein database can this be related to and how can the relation be drawn to pick the proteins that are contained in the data contained in the chip.\r\nThank you so much for the anticipated help!\r\n "}}