{"action":"created","issue":{"url":"https://api.github.com/repos/kwikteam/phy/issues/553","labels_url":"https://api.github.com/repos/kwikteam/phy/issues/553/labels{/name}","comments_url":"https://api.github.com/repos/kwikteam/phy/issues/553/comments","events_url":"https://api.github.com/repos/kwikteam/phy/issues/553/events","html_url":"https://github.com/kwikteam/phy/issues/553","id":95616433,"number":553,"title":"data not saved on kwik file at the end of phy spikesort","user":{"login":"ArminLak","id":13000375,"avatar_url":"https://avatars.githubusercontent.com/u/13000375?v=3","gravatar_id":"","url":"https://api.github.com/users/ArminLak","html_url":"https://github.com/ArminLak","followers_url":"https://api.github.com/users/ArminLak/followers","following_url":"https://api.github.com/users/ArminLak/following{/other_user}","gists_url":"https://api.github.com/users/ArminLak/gists{/gist_id}","starred_url":"https://api.github.com/users/ArminLak/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/ArminLak/subscriptions","organizations_url":"https://api.github.com/users/ArminLak/orgs","repos_url":"https://api.github.com/users/ArminLak/repos","events_url":"https://api.github.com/users/ArminLak/events{/privacy}","received_events_url":"https://api.github.com/users/ArminLak/received_events","type":"User","site_admin":false},"labels":[{"url":"https://api.github.com/repos/kwikteam/phy/labels/bug","name":"bug","color":"fc2929"}],"state":"open","locked":false,"assignee":{"login":"rossant","id":1942359,"avatar_url":"https://avatars.githubusercontent.com/u/1942359?v=3","gravatar_id":"","url":"https://api.github.com/users/rossant","html_url":"https://github.com/rossant","followers_url":"https://api.github.com/users/rossant/followers","following_url":"https://api.github.com/users/rossant/following{/other_user}","gists_url":"https://api.github.com/users/rossant/gists{/gist_id}","starred_url":"https://api.github.com/users/rossant/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/rossant/subscriptions","organizations_url":"https://api.github.com/users/rossant/orgs","repos_url":"https://api.github.com/users/rossant/repos","events_url":"https://api.github.com/users/rossant/events{/privacy}","received_events_url":"https://api.github.com/users/rossant/received_events","type":"User","site_admin":false},"milestone":{"url":"https://api.github.com/repos/kwikteam/phy/milestones/11","html_url":"https://github.com/kwikteam/phy/milestones/v0.2.2","labels_url":"https://api.github.com/repos/kwikteam/phy/milestones/11/labels","id":1210068,"number":11,"title":"v0.2.2","description":"Bug fixes","creator":{"login":"rossant","id":1942359,"avatar_url":"https://avatars.githubusercontent.com/u/1942359?v=3","gravatar_id":"","url":"https://api.github.com/users/rossant","html_url":"https://github.com/rossant","followers_url":"https://api.github.com/users/rossant/followers","following_url":"https://api.github.com/users/rossant/following{/other_user}","gists_url":"https://api.github.com/users/rossant/gists{/gist_id}","starred_url":"https://api.github.com/users/rossant/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/rossant/subscriptions","organizations_url":"https://api.github.com/users/rossant/orgs","repos_url":"https://api.github.com/users/rossant/repos","events_url":"https://api.github.com/users/rossant/events{/privacy}","received_events_url":"https://api.github.com/users/rossant/received_events","type":"User","site_admin":false},"open_issues":7,"closed_issues":21,"state":"open","created_at":"2015-07-15T20:38:20Z","updated_at":"2015-07-23T09:35:24Z","due_on":"2015-08-04T22:00:00Z","closed_at":null},"comments":43,"created_at":"2015-07-17T08:53:23Z","updated_at":"2015-07-23T17:16:01Z","closed_at":null,"body":"Hi,\r\n\r\nI have now tried 3 times to use phy spikesort. At the end of sorting, the kwik file is very small and it looks like sorted spikes have not been stored there. Anyway we can fix this issue? \r\n\r\nhere is the messages in my terminal :  \r\n\r\nComputing the features: 99.99%. chunk 7399/7400.\r\nAll features computed and saved.\r\nSegmentation fault (core dumped)\r\n(phy)armin@martinotti:~/data/ALK01/2015-06-04$\r\n\r\n\r\nhere is the last lines the text file: \r\n\r\n2015-07-17 04:45:00  [D]  algorithms:407           Load `/data/armin/ALK01/2015-06-04/20150604_full_phyv2.phy/spikedetekt/89044188.waveforms.1` (float32, (4710, 20, 120)).\r\n2015-07-17 04:45:01  [D]  algorithms:407           Load `/data/armin/ALK01/2015-06-04/20150604_full_phyv2.phy/spikedetekt/89068813.waveforms.1` (float32, (5337, 20, 120)).\r\n2015-07-17 04:45:02  [D]  algorithms:407           Load `/data/armin/ALK01/2015-06-04/20150604_full_phyv2.phy/spikedetekt/89093438.waveforms.1` (float32, (4905, 20, 120)).\r\n\r\n\r\n"},"comment":{"url":"https://api.github.com/repos/kwikteam/phy/issues/comments/124170788","html_url":"https://github.com/kwikteam/phy/issues/553#issuecomment-124170788","issue_url":"https://api.github.com/repos/kwikteam/phy/issues/553","id":124170788,"user":{"login":"nsteinme","id":7590975,"avatar_url":"https://avatars.githubusercontent.com/u/7590975?v=3","gravatar_id":"","url":"https://api.github.com/users/nsteinme","html_url":"https://github.com/nsteinme","followers_url":"https://api.github.com/users/nsteinme/followers","following_url":"https://api.github.com/users/nsteinme/following{/other_user}","gists_url":"https://api.github.com/users/nsteinme/gists{/gist_id}","starred_url":"https://api.github.com/users/nsteinme/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/nsteinme/subscriptions","organizations_url":"https://api.github.com/users/nsteinme/orgs","repos_url":"https://api.github.com/users/nsteinme/repos","events_url":"https://api.github.com/users/nsteinme/events{/privacy}","received_events_url":"https://api.github.com/users/nsteinme/received_events","type":"User","site_admin":false},"created_at":"2015-07-23T17:16:01Z","updated_at":"2015-07-23T17:16:01Z","body":"p.s. looks like \"duration\" does not report correctly when using the \"interval\" option, that file was generated with --interval=0,60. "}}