{"action":"created","issue":{"url":"https://api.github.com/repos/voutcn/megahit/issues/35","labels_url":"https://api.github.com/repos/voutcn/megahit/issues/35/labels{/name}","comments_url":"https://api.github.com/repos/voutcn/megahit/issues/35/comments","events_url":"https://api.github.com/repos/voutcn/megahit/issues/35/events","html_url":"https://github.com/voutcn/megahit/issues/35","id":75272818,"number":35,"title":"Installation with GPU capability","user":{"login":"jregalad","id":9933705,"avatar_url":"https://avatars.githubusercontent.com/u/9933705?v=3","gravatar_id":"","url":"https://api.github.com/users/jregalad","html_url":"https://github.com/jregalad","followers_url":"https://api.github.com/users/jregalad/followers","following_url":"https://api.github.com/users/jregalad/following{/other_user}","gists_url":"https://api.github.com/users/jregalad/gists{/gist_id}","starred_url":"https://api.github.com/users/jregalad/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/jregalad/subscriptions","organizations_url":"https://api.github.com/users/jregalad/orgs","repos_url":"https://api.github.com/users/jregalad/repos","events_url":"https://api.github.com/users/jregalad/events{/privacy}","received_events_url":"https://api.github.com/users/jregalad/received_events","type":"User","site_admin":false},"labels":[],"state":"open","locked":false,"assignee":null,"milestone":null,"comments":1,"created_at":"2015-05-11T16:09:20Z","updated_at":"2015-05-11T16:19:32Z","closed_at":null,"body":"Hi, \r\nI'm trying to install MEGAHIT with GPU usage ( make use_gpu=1 )\r\n\r\nSo far it hasn't work, I solved some issues with my version of CUDA but now I am getting an error with the following cpp file: .lv2_gpu_functions_4B_sm300_nvvm_6.5_abi_x86_64.cpp\r\n\r\nIn function:\r\n`__device_stub__ZN3cub22RadixSortUpsweepKernelINS_23DeviceRadixSortDispatchILb0EjjiE16PtxUpsweepnelINS_23DeviceRadixSortDispatchILb0EjjiE16PtxUpsweepPolicyELb0EjiEEvPT1_PT2_S6_iibNS_13GridEvenShareIS6_EPolicyELb0EjiEEvPT1_PT2_S6_iibNS_13GridEvenShareIS6_EE(unsigned int*, int*, int, int, int, bool, cub::GridE(unsigned int*, int*, int, int, int, bool, cub::GridEvenShare<int>&) [clone .constprop.84]'\r\n\r\nundefined reference to `cudaSetupArgument'\r\nundefined reference to `cudaLaunch'\r\n\r\nHas any encountered the same errors?    "},"comment":{"url":"https://api.github.com/repos/voutcn/megahit/issues/comments/100967585","html_url":"https://github.com/voutcn/megahit/issues/35#issuecomment-100967585","issue_url":"https://api.github.com/repos/voutcn/megahit/issues/35","id":100967585,"user":{"login":"voutcn","id":6329785,"avatar_url":"https://avatars.githubusercontent.com/u/6329785?v=3","gravatar_id":"","url":"https://api.github.com/users/voutcn","html_url":"https://github.com/voutcn","followers_url":"https://api.github.com/users/voutcn/followers","following_url":"https://api.github.com/users/voutcn/following{/other_user}","gists_url":"https://api.github.com/users/voutcn/gists{/gist_id}","starred_url":"https://api.github.com/users/voutcn/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/voutcn/subscriptions","organizations_url":"https://api.github.com/users/voutcn/orgs","repos_url":"https://api.github.com/users/voutcn/repos","events_url":"https://api.github.com/users/voutcn/events{/privacy}","received_events_url":"https://api.github.com/users/voutcn/received_events","type":"User","site_admin":false},"created_at":"2015-05-11T16:19:32Z","updated_at":"2015-05-11T16:19:32Z","body":"How about `make clean` and compile again?\r\nBTW, which operating system, cuda version and GPU card are you using?"}}