{"action":"created","issue":{"url":"https://api.github.com/repos/tardis-sn/tardis/issues/242","labels_url":"https://api.github.com/repos/tardis-sn/tardis/issues/242/labels{/name}","comments_url":"https://api.github.com/repos/tardis-sn/tardis/issues/242/comments","events_url":"https://api.github.com/repos/tardis-sn/tardis/issues/242/events","html_url":"https://github.com/tardis-sn/tardis/issues/242","id":60086376,"number":242,"title":"Atomic Database project specifications","user":{"login":"wkerzendorf","id":506116,"avatar_url":"https://avatars.githubusercontent.com/u/506116?v=3","gravatar_id":"","url":"https://api.github.com/users/wkerzendorf","html_url":"https://github.com/wkerzendorf","followers_url":"https://api.github.com/users/wkerzendorf/followers","following_url":"https://api.github.com/users/wkerzendorf/following{/other_user}","gists_url":"https://api.github.com/users/wkerzendorf/gists{/gist_id}","starred_url":"https://api.github.com/users/wkerzendorf/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/wkerzendorf/subscriptions","organizations_url":"https://api.github.com/users/wkerzendorf/orgs","repos_url":"https://api.github.com/users/wkerzendorf/repos","events_url":"https://api.github.com/users/wkerzendorf/events{/privacy}","received_events_url":"https://api.github.com/users/wkerzendorf/received_events","type":"User","site_admin":false},"labels":[],"state":"open","locked":false,"assignee":null,"milestone":null,"comments":9,"created_at":"2015-03-06T10:46:56Z","updated_at":"2015-03-07T16:01:58Z","closed_at":null,"body":"The development of the Atomic Database happens in github.com/tardis-sn/cassis\r\n\r\nAs an explanation, the atomic databases contains two big tables: (1) a table for levels in atoms (2) a table of lines that connect these levels. \r\n\r\nThese are the specifications for the PR for the Atomic database:\r\n * the parser should live in cassis/io/kurucz\r\n * parse http://kurucz.harvard.edu/atoms/1401/gf1401.gam\r\n  * use pyparsing to parse the first line into how many lines saved, etc. -> save to dictionary\r\n  * at line 33 there is a fixed format table; use pandas to read in the first six columns (until g Lande)\r\n* the sqlalchemy can live in cassis/alchemy\r\n* Use sqlalchemy to build an sqlite table for the pandas table\r\n * [optional] read in the lines file and link in database with the levels file. (will update this with specifics soon).\r\n\r\nThe further development for the atomic database throughout the summer\r\n\r\n * Add more metadata to the atomic database from the given files\r\n * prepare the database for inputting data from multiple sources\r\n  * ChiantiPy will bring the same information measured by the CHIANTI team\r\n  * Topbase atomic data and some others \r\n * Make a writer for the TARDIS HDF5 format\r\n * visualize the atomic data through grotrian diagrams\r\n * compare the difference in simulations with the different atomic databases\r\n"},"comment":{"url":"https://api.github.com/repos/tardis-sn/tardis/issues/comments/77695253","html_url":"https://github.com/tardis-sn/tardis/issues/242#issuecomment-77695253","issue_url":"https://api.github.com/repos/tardis-sn/tardis/issues/242","id":77695253,"user":{"login":"wkerzendorf","id":506116,"avatar_url":"https://avatars.githubusercontent.com/u/506116?v=3","gravatar_id":"","url":"https://api.github.com/users/wkerzendorf","html_url":"https://github.com/wkerzendorf","followers_url":"https://api.github.com/users/wkerzendorf/followers","following_url":"https://api.github.com/users/wkerzendorf/following{/other_user}","gists_url":"https://api.github.com/users/wkerzendorf/gists{/gist_id}","starred_url":"https://api.github.com/users/wkerzendorf/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/wkerzendorf/subscriptions","organizations_url":"https://api.github.com/users/wkerzendorf/orgs","repos_url":"https://api.github.com/users/wkerzendorf/repos","events_url":"https://api.github.com/users/wkerzendorf/events{/privacy}","received_events_url":"https://api.github.com/users/wkerzendorf/received_events","type":"User","site_admin":false},"created_at":"2015-03-07T16:01:58Z","updated_at":"2015-03-07T16:01:58Z","body":"@Mnw2212 @pfrcks that's roughly right. "}}