{"action":"created","issue":{"url":"https://api.github.com/repos/PacificBiosciences/blasr/issues/154","labels_url":"https://api.github.com/repos/PacificBiosciences/blasr/issues/154/labels{/name}","comments_url":"https://api.github.com/repos/PacificBiosciences/blasr/issues/154/comments","events_url":"https://api.github.com/repos/PacificBiosciences/blasr/issues/154/events","html_url":"https://github.com/PacificBiosciences/blasr/issues/154","id":116696281,"number":154,"title":" installing error \"libconfig.h\" ","user":{"login":"meibinbin","id":15729203,"avatar_url":"https://avatars.githubusercontent.com/u/15729203?v=3","gravatar_id":"","url":"https://api.github.com/users/meibinbin","html_url":"https://github.com/meibinbin","followers_url":"https://api.github.com/users/meibinbin/followers","following_url":"https://api.github.com/users/meibinbin/following{/other_user}","gists_url":"https://api.github.com/users/meibinbin/gists{/gist_id}","starred_url":"https://api.github.com/users/meibinbin/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/meibinbin/subscriptions","organizations_url":"https://api.github.com/users/meibinbin/orgs","repos_url":"https://api.github.com/users/meibinbin/repos","events_url":"https://api.github.com/users/meibinbin/events{/privacy}","received_events_url":"https://api.github.com/users/meibinbin/received_events","type":"User","site_admin":false},"labels":[],"state":"closed","locked":false,"assignee":null,"milestone":null,"comments":4,"created_at":"2015-11-13T04:04:27Z","updated_at":"2015-11-15T17:14:38Z","closed_at":"2015-11-15T17:14:38Z","body":"Hello\r\n\r\nWhen I run the \"make init-submodule\" after running \"./configure.py --no-pbbam\" successfully, it showed such errors:\r\nmake update-submodule\r\nmake[1]: Entering directory `/home/wubinbin/ToolKits/blasr'\r\ngit submodule update --init\r\nmake[1]: git: Command not found\r\nmake[1]: *** [update-submodule] Error 127\r\nmake[1]: Leaving directory `/home/wubinbin/ToolKits/blasr'\r\nmake: *** [init-submodule] Error 2\r\n\r\nand after when I run the \"make all\" after, it showed such errors:\r\niblasr/BlasrHeaders.h:22:23: fatal error: libconfig.h: No such file or directory\r\ncompilation terminated.\r\nmake: *** [Blasr.o] Error 1\r\n\r\nplease help me to solve this problem.I am looking forward to your answer as soon as possible.Thanks.\r\n"},"comment":{"url":"https://api.github.com/repos/PacificBiosciences/blasr/issues/comments/156831469","html_url":"https://github.com/PacificBiosciences/blasr/issues/154#issuecomment-156831469","issue_url":"https://api.github.com/repos/PacificBiosciences/blasr/issues/154","id":156831469,"user":{"login":"pb-cdunn","id":12086299,"avatar_url":"https://avatars.githubusercontent.com/u/12086299?v=3","gravatar_id":"","url":"https://api.github.com/users/pb-cdunn","html_url":"https://github.com/pb-cdunn","followers_url":"https://api.github.com/users/pb-cdunn/followers","following_url":"https://api.github.com/users/pb-cdunn/following{/other_user}","gists_url":"https://api.github.com/users/pb-cdunn/gists{/gist_id}","starred_url":"https://api.github.com/users/pb-cdunn/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/pb-cdunn/subscriptions","organizations_url":"https://api.github.com/users/pb-cdunn/orgs","repos_url":"https://api.github.com/users/pb-cdunn/repos","events_url":"https://api.github.com/users/pb-cdunn/events{/privacy}","received_events_url":"https://api.github.com/users/pb-cdunn/received_events","type":"User","site_admin":false},"created_at":"2015-11-15T17:14:38Z","updated_at":"2015-11-15T17:14:38Z","body":"> so if I want to install BLASR successfully,I have to install the package 'git' in advance?\r\n\r\nNot quite. You can download a [tarball](http://stackoverflow.com/a/23164066) for **blasr**, and another for **blasr_libcpp**. You will need to run `configure.py` for each separately. If you unpack the latter as `libcpp` within the former, then `make configure-submodule` will still work.\r\n\r\nYou can also build and install them completely separately. In that case, you will need to be aware that **blasr_libcpp** is actually 3 libraries, and you will have to specify all 3 explicitly when you configure **blasr** to build and link against them.\r\n\r\nWhat we are currently missing is a simple way to build **blasr** against a common installation location, like `/usr/local` and/or `~/local`. Everyone's system is different, so we can only *help* with integration."}}