{"action":"created","issue":{"url":"https://api.github.com/repos/healpy/healpy/issues/248","labels_url":"https://api.github.com/repos/healpy/healpy/issues/248/labels{/name}","comments_url":"https://api.github.com/repos/healpy/healpy/issues/248/comments","events_url":"https://api.github.com/repos/healpy/healpy/issues/248/events","html_url":"https://github.com/healpy/healpy/issues/248","id":72105650,"number":248,"title":"Installation failure on MacOS X","user":{"login":"astrofrog","id":314716,"avatar_url":"https://avatars.githubusercontent.com/u/314716?v=3","gravatar_id":"","url":"https://api.github.com/users/astrofrog","html_url":"https://github.com/astrofrog","followers_url":"https://api.github.com/users/astrofrog/followers","following_url":"https://api.github.com/users/astrofrog/following{/other_user}","gists_url":"https://api.github.com/users/astrofrog/gists{/gist_id}","starred_url":"https://api.github.com/users/astrofrog/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/astrofrog/subscriptions","organizations_url":"https://api.github.com/users/astrofrog/orgs","repos_url":"https://api.github.com/users/astrofrog/repos","events_url":"https://api.github.com/users/astrofrog/events{/privacy}","received_events_url":"https://api.github.com/users/astrofrog/received_events","type":"User","site_admin":false},"labels":[],"state":"open","locked":false,"assignee":null,"milestone":null,"comments":15,"created_at":"2015-04-30T09:08:54Z","updated_at":"2015-04-30T15:29:11Z","closed_at":null,"body":"I cloned the repo then did:\r\n\r\n```\r\ngit submodule init\r\ngit submodule update\r\npython setup.py install\r\n```\r\n\r\nand got the following failure:\r\n\r\n```\r\nrunning install\r\nrunning bdist_egg\r\nrunning egg_info\r\ncreating healpy.egg-info\r\nwriting requirements to healpy.egg-info/requires.txt\r\nwriting healpy.egg-info/PKG-INFO\r\nwriting dependency_links to healpy.egg-info/dependency_links.txt\r\nwriting top-level names to healpy.egg-info/top_level.txt\r\nwriting manifest file 'healpy.egg-info/SOURCES.txt'\r\nchecking if configure script for library 'cfitsio' exists\r\nchecking if configure script for library 'healpix_cxx' exists\r\nreading manifest file 'healpy.egg-info/SOURCES.txt'\r\nreading manifest template 'MANIFEST.in'\r\nwarning: no previously-included files found matching 'healpy/test/data/ipython*'\r\nwarning: no previously-included files found matching 'cfitsio/*pdf'\r\nwarning: no previously-included files found matching 'cfitsio/*ps'\r\nwarning: no previously-included files found matching 'cfitsio/*doc'\r\nwarning: no previously-included files found matching 'cfitsio/*tex'\r\nwarning: no previously-included files found matching '*.so'\r\nwarning: no previously-included files found matching '*.a'\r\nwarning: no files found matching 'healpy/src/_query_disc.cpp'\r\nwarning: no files found matching 'healpy/src/_sphtools.cpp'\r\nwarning: no files found matching 'healpy/src/_pixelfunc.cpp'\r\nwriting manifest file 'healpy.egg-info/SOURCES.txt'\r\ninstalling library code to build/bdist.macosx-10.5-x86_64/egg\r\nrunning build_clib\r\nchecking if library 'cfitsio' is installed\r\nfound 'cfitsio' installed, using it\r\nchecking if library 'healpix_cxx' is installed\r\nPackage healpix_cxx was not found in the pkg-config search path.\r\nPerhaps you should add the directory containing `healpix_cxx.pc'\r\nto the PKG_CONFIG_PATH environment variable\r\nNo package 'healpix_cxx' found\r\nbuilding library 'healpix_cxx' from source\r\ncreating /Users/tom/tmp/healpy/build\r\ncreating /Users/tom/tmp/healpy/build/temp.macosx-10.5-x86_64-3.4\r\ncreating /Users/tom/tmp/healpy/build/temp.macosx-10.5-x86_64-3.4/healpix_cxx\r\n/bin/sh /Users/tom/tmp/healpy/healpixsubmodule/src/cxx/autotools/configure --prefix=/Users/tom/tmp/healpy/build/temp.macosx-10.5-x86_64-3.4 --disable-shared --with-pic --disable-maintainer-mode\r\nchecking for a BSD-compatible install... /usr/bin/install -c\r\nchecking whether build environment is sane... yes\r\nchecking for a thread-safe mkdir -p... /Users/tom/tmp/healpy/healpixsubmodule/src/cxx/autotools/install-sh -c -d\r\nchecking for gawk... no\r\nchecking for mawk... no\r\nchecking for nawk... no\r\nchecking for awk... awk\r\nchecking whether make sets $(MAKE)... yes\r\nchecking whether make supports nested variables... yes\r\nchecking whether to enable maintainer-specific portions of Makefiles... no\r\nchecking for style of include used by make... GNU\r\nchecking for gcc... /Users/tom/usr/bin/clang\r\nchecking whether the C compiler works... yes\r\nchecking for C compiler default output file name... a.out\r\nchecking for suffix of executables... \r\nchecking whether we are cross compiling... no\r\nchecking for suffix of object files... o\r\nchecking whether we are using the GNU C compiler... yes\r\nchecking whether /Users/tom/usr/bin/clang accepts -g... yes\r\nchecking for /Users/tom/usr/bin/clang option to accept ISO C89... none needed\r\nchecking whether /Users/tom/usr/bin/clang understands -c and -o together... rm: conftest.dSYM: is a directory\r\nyes\r\nchecking dependency style of /Users/tom/usr/bin/clang... gcc3\r\nchecking for ar... ar\r\nchecking the archiver (ar) interface... ar\r\nchecking build system type... x86_64-apple-darwin12.5.0\r\nchecking host system type... x86_64-apple-darwin12.5.0\r\nchecking how to print strings... printf\r\nchecking for a sed that does not truncate output... /opt/local/bin/gsed\r\nchecking for grep that handles long lines and -e... /usr/bin/grep\r\nchecking for egrep... /usr/bin/grep -E\r\nchecking for fgrep... /usr/bin/grep -F\r\nchecking for ld used by /Users/tom/usr/bin/clang... /usr/bin/ld\r\nchecking if the linker (/usr/bin/ld) is GNU ld... no\r\nchecking for BSD- or MS-compatible name lister (nm)... /opt/local/bin/nm\r\nchecking the name lister (/opt/local/bin/nm) interface... rm: conftest.dSYM: is a directory\r\nBSD nm\r\nchecking whether ln -s works... yes\r\nchecking the maximum length of command line arguments... 196608\r\nchecking how to convert x86_64-apple-darwin12.5.0 file names to x86_64-apple-darwin12.5.0 format... func_convert_file_noop\r\nchecking how to convert x86_64-apple-darwin12.5.0 file names to toolchain format... func_convert_file_noop\r\nchecking for /usr/bin/ld option to reload object files... -r\r\nchecking for objdump... no\r\nchecking how to recognize dependent libraries... pass_all\r\nchecking for dlltool... no\r\nchecking how to associate runtime and link libraries... printf %s\\n\r\nchecking for archiver @FILE support... rm: conftest.dSYM: is a directory\r\nno\r\nchecking for strip... strip\r\nchecking for ranlib... ranlib\r\nchecking command to parse /opt/local/bin/nm output from /Users/tom/usr/bin/clang object... rm: conftest.dSYM: is a directory\r\nok\r\nchecking for sysroot... no\r\nchecking for a working dd... /bin/dd\r\nchecking how to truncate binary pipes... /bin/dd bs=4096 count=1\r\nchecking for mt... no\r\nchecking if : is a manifest tool... no\r\nchecking for dsymutil... dsymutil\r\nchecking for nmedit... nmedit\r\nchecking for lipo... lipo\r\nchecking for otool... otool\r\nchecking for otool64... no\r\nchecking for -single_module linker flag... yes\r\nchecking for -exported_symbols_list linker flag... yes\r\nchecking for -force_load linker flag... yes\r\nchecking how to run the C preprocessor... /Users/tom/usr/bin/clang -E\r\nchecking for ANSI C header files... yes\r\nchecking for sys/types.h... yes\r\nchecking for sys/stat.h... yes\r\nchecking for stdlib.h... yes\r\nchecking for string.h... yes\r\nchecking for memory.h... yes\r\nchecking for strings.h... yes\r\nchecking for inttypes.h... yes\r\nchecking for stdint.h... yes\r\nchecking for unistd.h... yes\r\nchecking for dlfcn.h... yes\r\nchecking for objdir... .libs\r\nchecking if /Users/tom/usr/bin/clang supports -fno-rtti -fno-exceptions... yes\r\nchecking for /Users/tom/usr/bin/clang option to produce PIC... -fno-common -DPIC\r\nchecking if /Users/tom/usr/bin/clang PIC flag -fno-common -DPIC works... yes\r\nchecking if /Users/tom/usr/bin/clang static flag -static works... no\r\nchecking if /Users/tom/usr/bin/clang supports -c -o file.o... yes\r\nchecking if /Users/tom/usr/bin/clang supports -c -o file.o... (cached) yes\r\nchecking whether the /Users/tom/usr/bin/clang linker (/usr/bin/ld) supports shared libraries... yes\r\nchecking dynamic linker characteristics... darwin12.5.0 dyld\r\nchecking how to hardcode library paths into programs... immediate\r\nchecking whether stripping libraries is possible... yes\r\nchecking if libtool supports shared libraries... yes\r\nchecking whether to build shared libraries... no\r\nchecking whether to build static libraries... yes\r\nchecking whether make supports nested variables... (cached) yes\r\nchecking for /Users/tom/usr/bin/clang option to accept ISO C99... none needed\r\nchecking for /Users/tom/usr/bin/clang option to support OpenMP... unsupported\r\nchecking whether C compiler accepts -fno-tree-vectorize... yes\r\nchecking whether C compiler accepts -fno-math-errno... yes\r\nchecking whether C compiler accepts -funsafe-math-optimizations... yes\r\nchecking whether C compiler accepts -fno-trapping-math... yes\r\nchecking whether C compiler accepts -fno-rounding-math... yes\r\nchecking whether C compiler accepts -fno-signaling-nans... yes\r\nchecking whether C compiler accepts -fcx-limited-range... yes\r\nchecking whether we are using the GNU C++ compiler... yes\r\nchecking whether g++ accepts -g... yes\r\nchecking dependency style of g++... gcc3\r\nchecking how to run the C++ preprocessor... g++ -E\r\nchecking for ld used by g++... /usr/bin/ld\r\nchecking if the linker (/usr/bin/ld) is GNU ld... no\r\nchecking whether the g++ linker (/usr/bin/ld) supports shared libraries... yes\r\nchecking for g++ option to produce PIC... -fno-common -DPIC\r\nchecking if g++ PIC flag -fno-common -DPIC works... yes\r\nchecking if g++ static flag -static works... no\r\nchecking if g++ supports -c -o file.o... yes\r\nchecking if g++ supports -c -o file.o... (cached) yes\r\nchecking whether the g++ linker (/usr/bin/ld) supports shared libraries... yes\r\nchecking dynamic linker characteristics... darwin12.5.0 dyld\r\nchecking how to hardcode library paths into programs... immediate\r\nchecking for g++ option to support OpenMP... -fopenmp\r\nchecking whether C++ compiler accepts -fno-tree-vectorize... yes\r\nchecking whether C++ compiler accepts -fno-math-errno... yes\r\nchecking whether C++ compiler accepts -funsafe-math-optimizations... yes\r\nchecking whether C++ compiler accepts -fno-trapping-math... yes\r\nchecking whether C++ compiler accepts -fno-rounding-math... yes\r\nchecking whether C++ compiler accepts -fno-signaling-nans... yes\r\nchecking whether C++ compiler accepts -fcx-limited-range... yes\r\nchecking for pkg-config... /opt/local/bin/pkg-config\r\nchecking pkg-config is at least version 0.9.0... yes\r\nchecking for CFITSIO... yes\r\nchecking for ffgnrwll in -lcfitsio... yes\r\nchecking fitsio.h usability... yes\r\nchecking fitsio.h presence... no\r\nconfigure: WARNING: fitsio.h: accepted by the compiler, rejected by the preprocessor!\r\nconfigure: WARNING: fitsio.h: proceeding with the compiler's result\r\nchecking for fitsio.h... yes\r\nchecking our pkgconfig libname... healpix_cxx\r\nchecking our pkgconfig version... 3.11.3\r\nchecking our pkgconfig_libdir... ${libdir}/pkgconfig\r\nexpanded our pkgconfig_libdir... /Users/tom/tmp/healpy/build/temp.macosx-10.5-x86_64-3.4/lib/pkgconfig\r\nchecking our pkgconfig_libfile... healpix_cxx.pc\r\nchecking our package / suffix... healpix_cxx / \r\nchecking our pkgconfig description... healpix_cxx Library\r\nchecking our pkgconfig requires... \r\nchecking our pkgconfig ext libs... -lhealpix_cxx\r\nchecking our pkgconfig cppflags... -I/opt/local/include\r\nchecking our pkgconfig ldflags... \r\nnoninstalled pkgconfig -L /Users/tom/tmp/healpy/build/temp.macosx-10.5-x86_64-3.4/healpix_cxx/.libs\r\nnoninstalled pkgconfig -I //Users/tom/tmp/healpy/healpixsubmodule/src/cxx/autotools\r\nchecking that generated files are newer than configure... done\r\nconfigure: creating ./config.status\r\nconfig.status: creating Makefile\r\nconfig.status: executing depfiles commands\r\nconfig.status: executing libtool commands\r\nconfig.status: executing healpix_cxx.pc commands\r\nconfig.status: creating healpix_cxx.pc.in\r\nconfig.status: creating healpix_cxx.pc\r\nconfig.status: creating healpix_cxx-uninstalled.pc\r\nconfig.status: creating healpix_cxx-uninstalled.sh\r\nmake install\r\n  CC       c_utils/c_utils.lo\r\nclang: warning: argument unused during compilation: '-fno-tree-vectorize'\r\nclang: warning: argument unused during compilation: '-fno-rounding-math'\r\nclang: warning: argument unused during compilation: '-fno-signaling-nans'\r\nclang: warning: argument unused during compilation: '-fcx-limited-range'\r\nclang: warning: argument unused during compilation: '-I .'\r\nclang: warning: argument unused during compilation: '-I /Users/tom/tmp/healpy/healpixsubmodule/src/cxx/autotools'\r\nclang: warning: argument unused during compilation: '-I /opt/local/include'\r\nclang: warning: argument unused during compilation: '-I /Users/tom/tmp/healpy/healpixsubmodule/src/cxx/autotools/c_utils'\r\nclang: warning: argument unused during compilation: '-I /Users/tom/tmp/healpy/healpixsubmodule/src/cxx/autotools/libfftpack'\r\nclang: warning: argument unused during compilation: '-I /Users/tom/tmp/healpy/healpixsubmodule/src/cxx/autotools/libsharp'\r\nclang: warning: argument unused during compilation: '-I /Users/tom/tmp/healpy/healpixsubmodule/src/cxx/autotools/cxxsupport'\r\nclang: warning: argument unused during compilation: '-I /Users/tom/miniconda3/envs/production/include'\r\nclang: warning: argument unused during compilation: '-fno-tree-vectorize'\r\nclang: warning: argument unused during compilation: '-fno-rounding-math'\r\nclang: warning: argument unused during compilation: '-fno-signaling-nans'\r\nclang: warning: argument unused during compilation: '-fcx-limited-range'\r\n  CC       c_utils/walltime_c.lo\r\nclang: warning: argument unused during compilation: '-fno-tree-vectorize'\r\nclang: warning: argument unused during compilation: '-fno-rounding-math'\r\nclang: warning: argument unused during compilation: '-fno-signaling-nans'\r\nclang: warning: argument unused during compilation: '-fcx-limited-range'\r\nclang: warning: argument unused during compilation: '-I .'\r\nclang: warning: argument unused during compilation: '-I /Users/tom/tmp/healpy/healpixsubmodule/src/cxx/autotools'\r\nclang: warning: argument unused during compilation: '-I /opt/local/include'\r\nclang: warning: argument unused during compilation: '-I /Users/tom/tmp/healpy/healpixsubmodule/src/cxx/autotools/c_utils'\r\nclang: warning: argument unused during compilation: '-I /Users/tom/tmp/healpy/healpixsubmodule/src/cxx/autotools/libfftpack'\r\nclang: warning: argument unused during compilation: '-I /Users/tom/tmp/healpy/healpixsubmodule/src/cxx/autotools/libsharp'\r\nclang: warning: argument unused during compilation: '-I /Users/tom/tmp/healpy/healpixsubmodule/src/cxx/autotools/cxxsupport'\r\nclang: warning: argument unused during compilation: '-I /Users/tom/miniconda3/envs/production/include'\r\nclang: warning: argument unused during compilation: '-fno-tree-vectorize'\r\nclang: warning: argument unused during compilation: '-fno-rounding-math'\r\nclang: warning: argument unused during compilation: '-fno-signaling-nans'\r\nclang: warning: argument unused during compilation: '-fcx-limited-range'\r\n  CC       libfftpack/bluestein.lo\r\nclang: warning: argument unused during compilation: '-fno-tree-vectorize'\r\nclang: warning: argument unused during compilation: '-fno-rounding-math'\r\nclang: warning: argument unused during compilation: '-fno-signaling-nans'\r\nclang: warning: argument unused during compilation: '-fcx-limited-range'\r\nclang: warning: argument unused during compilation: '-I .'\r\nclang: warning: argument unused during compilation: '-I /Users/tom/tmp/healpy/healpixsubmodule/src/cxx/autotools'\r\nclang: warning: argument unused during compilation: '-I /opt/local/include'\r\nclang: warning: argument unused during compilation: '-I /Users/tom/tmp/healpy/healpixsubmodule/src/cxx/autotools/c_utils'\r\nclang: warning: argument unused during compilation: '-I /Users/tom/tmp/healpy/healpixsubmodule/src/cxx/autotools/libfftpack'\r\nclang: warning: argument unused during compilation: '-I /Users/tom/tmp/healpy/healpixsubmodule/src/cxx/autotools/libsharp'\r\nclang: warning: argument unused during compilation: '-I /Users/tom/tmp/healpy/healpixsubmodule/src/cxx/autotools/cxxsupport'\r\nclang: warning: argument unused during compilation: '-I /Users/tom/miniconda3/envs/production/include'\r\nclang: warning: argument unused during compilation: '-fno-tree-vectorize'\r\nclang: warning: argument unused during compilation: '-fno-rounding-math'\r\nclang: warning: argument unused during compilation: '-fno-signaling-nans'\r\nclang: warning: argument unused during compilation: '-fcx-limited-range'\r\n  CC       libfftpack/fftpack.lo\r\nclang: warning: argument unused during compilation: '-fno-tree-vectorize'\r\nclang: warning: argument unused during compilation: '-fno-rounding-math'\r\nclang: warning: argument unused during compilation: '-fno-signaling-nans'\r\nclang: warning: argument unused during compilation: '-fcx-limited-range'\r\nclang: warning: argument unused during compilation: '-I .'\r\nclang: warning: argument unused during compilation: '-I /Users/tom/tmp/healpy/healpixsubmodule/src/cxx/autotools'\r\nclang: warning: argument unused during compilation: '-I /opt/local/include'\r\nclang: warning: argument unused during compilation: '-I /Users/tom/tmp/healpy/healpixsubmodule/src/cxx/autotools/c_utils'\r\nclang: warning: argument unused during compilation: '-I /Users/tom/tmp/healpy/healpixsubmodule/src/cxx/autotools/libfftpack'\r\nclang: warning: argument unused during compilation: '-I /Users/tom/tmp/healpy/healpixsubmodule/src/cxx/autotools/libsharp'\r\nclang: warning: argument unused during compilation: '-I /Users/tom/tmp/healpy/healpixsubmodule/src/cxx/autotools/cxxsupport'\r\nclang: warning: argument unused during compilation: '-I /Users/tom/miniconda3/envs/production/include'\r\nclang: warning: argument unused during compilation: '-fno-tree-vectorize'\r\nclang: warning: argument unused during compilation: '-fno-rounding-math'\r\nclang: warning: argument unused during compilation: '-fno-signaling-nans'\r\nclang: warning: argument unused during compilation: '-fcx-limited-range'\r\n  CC       libfftpack/ls_fft.lo\r\nclang: warning: argument unused during compilation: '-fno-tree-vectorize'\r\nclang: warning: argument unused during compilation: '-fno-rounding-math'\r\nclang: warning: argument unused during compilation: '-fno-signaling-nans'\r\nclang: warning: argument unused during compilation: '-fcx-limited-range'\r\nclang: warning: argument unused during compilation: '-I .'\r\nclang: warning: argument unused during compilation: '-I /Users/tom/tmp/healpy/healpixsubmodule/src/cxx/autotools'\r\nclang: warning: argument unused during compilation: '-I /opt/local/include'\r\nclang: warning: argument unused during compilation: '-I /Users/tom/tmp/healpy/healpixsubmodule/src/cxx/autotools/c_utils'\r\nclang: warning: argument unused during compilation: '-I /Users/tom/tmp/healpy/healpixsubmodule/src/cxx/autotools/libfftpack'\r\nclang: warning: argument unused during compilation: '-I /Users/tom/tmp/healpy/healpixsubmodule/src/cxx/autotools/libsharp'\r\nclang: warning: argument unused during compilation: '-I /Users/tom/tmp/healpy/healpixsubmodule/src/cxx/autotools/cxxsupport'\r\nclang: warning: argument unused during compilation: '-I /Users/tom/miniconda3/envs/production/include'\r\nclang: warning: argument unused during compilation: '-fno-tree-vectorize'\r\nclang: warning: argument unused during compilation: '-fno-rounding-math'\r\nclang: warning: argument unused during compilation: '-fno-signaling-nans'\r\nclang: warning: argument unused during compilation: '-fcx-limited-range'\r\n  CC       libsharp/sharp.lo\r\nclang: warning: argument unused during compilation: '-fno-tree-vectorize'\r\nclang: warning: argument unused during compilation: '-fno-rounding-math'\r\nclang: warning: argument unused during compilation: '-fno-signaling-nans'\r\nclang: warning: argument unused during compilation: '-fcx-limited-range'\r\nclang: warning: argument unused during compilation: '-I .'\r\nclang: warning: argument unused during compilation: '-I /Users/tom/tmp/healpy/healpixsubmodule/src/cxx/autotools'\r\nclang: warning: argument unused during compilation: '-I /opt/local/include'\r\nclang: warning: argument unused during compilation: '-I /Users/tom/tmp/healpy/healpixsubmodule/src/cxx/autotools/c_utils'\r\nclang: warning: argument unused during compilation: '-I /Users/tom/tmp/healpy/healpixsubmodule/src/cxx/autotools/libfftpack'\r\nclang: warning: argument unused during compilation: '-I /Users/tom/tmp/healpy/healpixsubmodule/src/cxx/autotools/libsharp'\r\nclang: warning: argument unused during compilation: '-I /Users/tom/tmp/healpy/healpixsubmodule/src/cxx/autotools/cxxsupport'\r\nclang: warning: argument unused during compilation: '-I /Users/tom/miniconda3/envs/production/include'\r\nclang: warning: argument unused during compilation: '-fno-tree-vectorize'\r\nclang: warning: argument unused during compilation: '-fno-rounding-math'\r\nclang: warning: argument unused during compilation: '-fno-signaling-nans'\r\nclang: warning: argument unused during compilation: '-fcx-limited-range'\r\n/Users/tom/tmp/healpy/healpixsubmodule/src/cxx/autotools/libsharp/sharp.c:463:9: warning: unknown pragma ignored [-Wunknown-pragmas]\r\n#pragma omp parallel if ((job->flags&SHARP_NO_OPENMP)==0)\r\n        ^\r\n/Users/tom/tmp/healpy/healpixsubmodule/src/cxx/autotools/libsharp/sharp.c:467:9: warning: unknown pragma ignored [-Wunknown-pragmas]\r\n#pragma omp for schedule(dynamic,1)\r\n        ^\r\n/Users/tom/tmp/healpy/healpixsubmodule/src/cxx/autotools/libsharp/sharp.c:616:9: warning: unknown pragma ignored [-Wunknown-pragmas]\r\n#pragma omp parallel if ((job->flags&SHARP_NO_OPENMP)==0)\r\n        ^\r\n/Users/tom/tmp/healpy/healpixsubmodule/src/cxx/autotools/libsharp/sharp.c:620:9: warning: unknown pragma ignored [-Wunknown-pragmas]\r\n#pragma omp for schedule(dynamic,1)\r\n        ^\r\n/Users/tom/tmp/healpy/healpixsubmodule/src/cxx/autotools/libsharp/sharp.c:670:9: warning: unknown pragma ignored [-Wunknown-pragmas]\r\n#pragma omp parallel if ((job->flags&SHARP_NO_OPENMP)==0)\r\n        ^\r\n/Users/tom/tmp/healpy/healpixsubmodule/src/cxx/autotools/libsharp/sharp.c:678:9: warning: unknown pragma ignored [-Wunknown-pragmas]\r\n#pragma omp for schedule(dynamic,1)\r\n        ^\r\n/Users/tom/tmp/healpy/healpixsubmodule/src/cxx/autotools/libsharp/sharp.c:693:9: warning: unknown pragma ignored [-Wunknown-pragmas]\r\n#pragma omp critical\r\n        ^\r\n7 warnings generated.\r\n  CC       libsharp/sharp_almhelpers.lo\r\nclang: warning: argument unused during compilation: '-fno-tree-vectorize'\r\nclang: warning: argument unused during compilation: '-fno-rounding-math'\r\nclang: warning: argument unused during compilation: '-fno-signaling-nans'\r\nclang: warning: argument unused during compilation: '-fcx-limited-range'\r\nclang: warning: argument unused during compilation: '-I .'\r\nclang: warning: argument unused during compilation: '-I /Users/tom/tmp/healpy/healpixsubmodule/src/cxx/autotools'\r\nclang: warning: argument unused during compilation: '-I /opt/local/include'\r\nclang: warning: argument unused during compilation: '-I /Users/tom/tmp/healpy/healpixsubmodule/src/cxx/autotools/c_utils'\r\nclang: warning: argument unused during compilation: '-I /Users/tom/tmp/healpy/healpixsubmodule/src/cxx/autotools/libfftpack'\r\nclang: warning: argument unused during compilation: '-I /Users/tom/tmp/healpy/healpixsubmodule/src/cxx/autotools/libsharp'\r\nclang: warning: argument unused during compilation: '-I /Users/tom/tmp/healpy/healpixsubmodule/src/cxx/autotools/cxxsupport'\r\nclang: warning: argument unused during compilation: '-I /Users/tom/miniconda3/envs/production/include'\r\nclang: warning: argument unused during compilation: '-fno-tree-vectorize'\r\nclang: warning: argument unused during compilation: '-fno-rounding-math'\r\nclang: warning: argument unused during compilation: '-fno-signaling-nans'\r\nclang: warning: argument unused during compilation: '-fcx-limited-range'\r\n  CC       libsharp/sharp_core.lo\r\nclang: warning: argument unused during compilation: '-fno-tree-vectorize'\r\nclang: warning: argument unused during compilation: '-fno-rounding-math'\r\nclang: warning: argument unused during compilation: '-fno-signaling-nans'\r\nclang: warning: argument unused during compilation: '-fcx-limited-range'\r\nclang: warning: argument unused during compilation: '-I .'\r\nclang: warning: argument unused during compilation: '-I /Users/tom/tmp/healpy/healpixsubmodule/src/cxx/autotools'\r\nclang: warning: argument unused during compilation: '-I /opt/local/include'\r\nclang: warning: argument unused during compilation: '-I /Users/tom/tmp/healpy/healpixsubmodule/src/cxx/autotools/c_utils'\r\nclang: warning: argument unused during compilation: '-I /Users/tom/tmp/healpy/healpixsubmodule/src/cxx/autotools/libfftpack'\r\nclang: warning: argument unused during compilation: '-I /Users/tom/tmp/healpy/healpixsubmodule/src/cxx/autotools/libsharp'\r\nclang: warning: argument unused during compilation: '-I /Users/tom/tmp/healpy/healpixsubmodule/src/cxx/autotools/cxxsupport'\r\nclang: warning: argument unused during compilation: '-I /Users/tom/miniconda3/envs/production/include'\r\nclang: warning: argument unused during compilation: '-fno-tree-vectorize'\r\nclang: warning: argument unused during compilation: '-fno-rounding-math'\r\nclang: warning: argument unused during compilation: '-fno-signaling-nans'\r\nclang: warning: argument unused during compilation: '-fcx-limited-range'\r\n  CC       libsharp/sharp_geomhelpers.lo\r\nclang: warning: argument unused during compilation: '-fno-tree-vectorize'\r\nclang: warning: argument unused during compilation: '-fno-rounding-math'\r\nclang: warning: argument unused during compilation: '-fno-signaling-nans'\r\nclang: warning: argument unused during compilation: '-fcx-limited-range'\r\nclang: warning: argument unused during compilation: '-I .'\r\nclang: warning: argument unused during compilation: '-I /Users/tom/tmp/healpy/healpixsubmodule/src/cxx/autotools'\r\nclang: warning: argument unused during compilation: '-I /opt/local/include'\r\nclang: warning: argument unused during compilation: '-I /Users/tom/tmp/healpy/healpixsubmodule/src/cxx/autotools/c_utils'\r\nclang: warning: argument unused during compilation: '-I /Users/tom/tmp/healpy/healpixsubmodule/src/cxx/autotools/libfftpack'\r\nclang: warning: argument unused during compilation: '-I /Users/tom/tmp/healpy/healpixsubmodule/src/cxx/autotools/libsharp'\r\nclang: warning: argument unused during compilation: '-I /Users/tom/tmp/healpy/healpixsubmodule/src/cxx/autotools/cxxsupport'\r\nclang: warning: argument unused during compilation: '-I /Users/tom/miniconda3/envs/production/include'\r\nclang: warning: argument unused during compilation: '-fno-tree-vectorize'\r\nclang: warning: argument unused during compilation: '-fno-rounding-math'\r\nclang: warning: argument unused during compilation: '-fno-signaling-nans'\r\nclang: warning: argument unused during compilation: '-fcx-limited-range'\r\n/Users/tom/tmp/healpy/healpixsubmodule/src/cxx/autotools/libsharp/sharp_geomhelpers.c:114:9: warning: unknown pragma ignored [-Wunknown-pragmas]\r\n#pragma omp parallel\r\n        ^\r\n/Users/tom/tmp/healpy/healpixsubmodule/src/cxx/autotools/libsharp/sharp_geomhelpers.c:117:9: warning: unknown pragma ignored [-Wunknown-pragmas]\r\n#pragma omp for schedule(dynamic,100)\r\n        ^\r\n2 warnings generated.\r\n  CC       libsharp/sharp_ylmgen_c.lo\r\nclang: warning: argument unused during compilation: '-fno-tree-vectorize'\r\nclang: warning: argument unused during compilation: '-fno-rounding-math'\r\nclang: warning: argument unused during compilation: '-fno-signaling-nans'\r\nclang: warning: argument unused during compilation: '-fcx-limited-range'\r\nclang: warning: argument unused during compilation: '-I .'\r\nclang: warning: argument unused during compilation: '-I /Users/tom/tmp/healpy/healpixsubmodule/src/cxx/autotools'\r\nclang: warning: argument unused during compilation: '-I /opt/local/include'\r\nclang: warning: argument unused during compilation: '-I /Users/tom/tmp/healpy/healpixsubmodule/src/cxx/autotools/c_utils'\r\nclang: warning: argument unused during compilation: '-I /Users/tom/tmp/healpy/healpixsubmodule/src/cxx/autotools/libfftpack'\r\nclang: warning: argument unused during compilation: '-I /Users/tom/tmp/healpy/healpixsubmodule/src/cxx/autotools/libsharp'\r\nclang: warning: argument unused during compilation: '-I /Users/tom/tmp/healpy/healpixsubmodule/src/cxx/autotools/cxxsupport'\r\nclang: warning: argument unused during compilation: '-I /Users/tom/miniconda3/envs/production/include'\r\nclang: warning: argument unused during compilation: '-fno-tree-vectorize'\r\nclang: warning: argument unused during compilation: '-fno-rounding-math'\r\nclang: warning: argument unused during compilation: '-fno-signaling-nans'\r\nclang: warning: argument unused during compilation: '-fcx-limited-range'\r\n  CXX      cxxsupport/announce.lo\r\ncc1plus: warning: command line option \"-Wstrict-prototypes\" is valid for Ada/C/ObjC but not for C++\r\ncc1plus: warning: command line option \"-Wstrict-prototypes\" is valid for Ada/C/ObjC but not for C++\r\n/Users/tom/tmp/healpy/healpixsubmodule/src/cxx/autotools/cxxsupport/announce.cc: In instantiation of ‘std::basic_ostream<_CharT, _Traits>& std::operator<<(std::basic_ostream<_CharT, _Traits>&, const std::basic_string<_CharT, _Traits, _Alloc>&) [with _CharT = char, _Traits = std::char_traits<char>, _Alloc = std::allocator<char>]’:\r\n/Users/tom/tmp/healpy/healpixsubmodule/src/cxx/autotools/cxxsupport/announce.cc:87:   instantiated from here\r\n/Users/tom/tmp/healpy/healpixsubmodule/src/cxx/autotools/cxxsupport/announce.cc:87: error: explicit instantiation of ‘std::basic_ostream<_CharT, _Traits>& std::operator<<(std::basic_ostream<_CharT, _Traits>&, const std::basic_string<_CharT, _Traits, _Alloc>&) [with _CharT = char, _Traits = std::char_traits<char>, _Alloc = std::allocator<char>]’ but no definition available\r\n/Users/tom/tmp/healpy/healpixsubmodule/src/cxx/autotools/cxxsupport/announce.cc: In instantiation of ‘std::basic_ostream<_CharT, _Traits>& std::operator<<(std::basic_ostream<_CharT, _Traits>&, const std::basic_string<_CharT, _Traits, _Alloc>&) [with _CharT = char, _Traits = std::char_traits<char>, _Alloc = std::allocator<char>]’:\r\n/Users/tom/tmp/healpy/healpixsubmodule/src/cxx/autotools/cxxsupport/announce.cc:87:   instantiated from here\r\n/Users/tom/tmp/healpy/healpixsubmodule/src/cxx/autotools/cxxsupport/announce.cc:87: error: explicit instantiation of ‘std::basic_ostream<_CharT, _Traits>& std::operator<<(std::basic_ostream<_CharT, _Traits>&, const std::basic_string<_CharT, _Traits, _Alloc>&) [with _CharT = char, _Traits = std::char_traits<char>, _Alloc = std::allocator<char>]’ but no definition available\r\n/Users/tom/tmp/healpy/healpixsubmodule/src/cxx/autotools/cxxsupport/announce.cc: In instantiation of ‘std::basic_ostream<_CharT, _Traits>& std::operator<<(std::basic_ostream<_CharT, _Traits>&, const std::basic_string<_CharT, _Traits, _Alloc>&) [with _CharT = char, _Traits = std::char_traits<char>, _Alloc = std::allocator<char>]’:\r\n/Users/tom/tmp/healpy/healpixsubmodule/src/cxx/autotools/cxxsupport/announce.cc:87:   instantiated from here\r\n/Users/tom/tmp/healpy/healpixsubmodule/src/cxx/autotools/cxxsupport/announce.cc:87: error: explicit instantiation of ‘std::basic_ostream<_CharT, _Traits>& std::operator<<(std::basic_ostream<_CharT, _Traits>&, const std::basic_string<_CharT, _Traits, _Alloc>&) [with _CharT = char, _Traits = std::char_traits<char>, _Alloc = std::allocator<char>]’ but no definition available\r\nmake: *** [cxxsupport/announce.lo] Error 1\r\nTraceback (most recent call last):\r\n  File \"setup.py\", line 190, in build_library\r\n    build_args = self.pkgconfig(pkg_config_name)\r\n  File \"setup.py\", line 169, in pkgconfig\r\n    args = [token[index:].decode() for token in check_output(cmd, env=self._environ).split()]\r\n  File \"setup.py\", line 77, in check_output\r\n    raise CalledProcessError(retcode, cmd)\r\nsubprocess.CalledProcessError: Command '('pkg-config', '--cflags-only-I', 'healpix_cxx')' returned non-zero exit status 1\r\n\r\nDuring handling of the above exception, another exception occurred:\r\n\r\nTraceback (most recent call last):\r\n  File \"setup.py\", line 454, in <module>\r\n    license='GPLv2'\r\n  File \"/Users/tom/miniconda3/envs/production/lib/python3.4/distutils/core.py\", line 148, in setup\r\n    dist.run_commands()\r\n  File \"/Users/tom/miniconda3/envs/production/lib/python3.4/distutils/dist.py\", line 955, in run_commands\r\n    self.run_command(cmd)\r\n  File \"/Users/tom/miniconda3/envs/production/lib/python3.4/distutils/dist.py\", line 974, in run_command\r\n    cmd_obj.run()\r\n  File \"/Users/tom/miniconda3/envs/production/lib/python3.4/site-packages/setuptools-15.2-py3.4.egg/setuptools/command/install.py\", line 67, in run\r\n  File \"/Users/tom/miniconda3/envs/production/lib/python3.4/site-packages/setuptools-15.2-py3.4.egg/setuptools/command/install.py\", line 109, in do_egg_install\r\n  File \"/Users/tom/miniconda3/envs/production/lib/python3.4/distutils/cmd.py\", line 313, in run_command\r\n    self.distribution.run_command(command)\r\n  File \"/Users/tom/miniconda3/envs/production/lib/python3.4/distutils/dist.py\", line 974, in run_command\r\n    cmd_obj.run()\r\n  File \"/Users/tom/miniconda3/envs/production/lib/python3.4/site-packages/setuptools-15.2-py3.4.egg/setuptools/command/bdist_egg.py\", line 159, in run\r\n  File \"/Users/tom/miniconda3/envs/production/lib/python3.4/distutils/cmd.py\", line 313, in run_command\r\n    self.distribution.run_command(command)\r\n  File \"/Users/tom/miniconda3/envs/production/lib/python3.4/distutils/dist.py\", line 974, in run_command\r\n    cmd_obj.run()\r\n  File \"/Users/tom/miniconda3/envs/production/lib/python3.4/distutils/command/build_clib.py\", line 115, in run\r\n    self.build_libraries(self.libraries)\r\n  File \"setup.py\", line 305, in build_libraries\r\n    for key, value in self.build_library(lib_name, **build_info).items():\r\n  File \"setup.py\", line 243, in build_library\r\n    check_call(cmd, cwd=build_temp, env=self._environ)\r\n  File \"/Users/tom/miniconda3/envs/production/lib/python3.4/subprocess.py\", line 561, in check_call\r\n    raise CalledProcessError(retcode, cmd)\r\nsubprocess.CalledProcessError: Command '['make', 'install']' returned non-zero exit status 2\r\n```"},"comment":{"url":"https://api.github.com/repos/healpy/healpy/issues/comments/97839299","html_url":"https://github.com/healpy/healpy/issues/248#issuecomment-97839299","issue_url":"https://api.github.com/repos/healpy/healpy/issues/248","id":97839299,"user":{"login":"astrofrog","id":314716,"avatar_url":"https://avatars.githubusercontent.com/u/314716?v=3","gravatar_id":"","url":"https://api.github.com/users/astrofrog","html_url":"https://github.com/astrofrog","followers_url":"https://api.github.com/users/astrofrog/followers","following_url":"https://api.github.com/users/astrofrog/following{/other_user}","gists_url":"https://api.github.com/users/astrofrog/gists{/gist_id}","starred_url":"https://api.github.com/users/astrofrog/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/astrofrog/subscriptions","organizations_url":"https://api.github.com/users/astrofrog/orgs","repos_url":"https://api.github.com/users/astrofrog/repos","events_url":"https://api.github.com/users/astrofrog/events{/privacy}","received_events_url":"https://api.github.com/users/astrofrog/received_events","type":"User","site_admin":false},"created_at":"2015-04-30T15:29:11Z","updated_at":"2015-04-30T15:29:11Z","body":"@lpsinger - the known issues seems like the right place to put this. I don't have time to open a PR this week but will see what I can do later, unless you or someone else beats me to it."}}