{"action":"created","issue":{"url":"https://api.github.com/repos/edgarriba/OpenDroneMap/issues/9","labels_url":"https://api.github.com/repos/edgarriba/OpenDroneMap/issues/9/labels{/name}","comments_url":"https://api.github.com/repos/edgarriba/OpenDroneMap/issues/9/comments","events_url":"https://api.github.com/repos/edgarriba/OpenDroneMap/issues/9/events","html_url":"https://github.com/edgarriba/OpenDroneMap/issues/9","id":120475119,"number":9,"title":"More config errors","user":{"login":"dakotabenjamin","id":1847818,"avatar_url":"https://avatars.githubusercontent.com/u/1847818?v=3","gravatar_id":"","url":"https://api.github.com/users/dakotabenjamin","html_url":"https://github.com/dakotabenjamin","followers_url":"https://api.github.com/users/dakotabenjamin/followers","following_url":"https://api.github.com/users/dakotabenjamin/following{/other_user}","gists_url":"https://api.github.com/users/dakotabenjamin/gists{/gist_id}","starred_url":"https://api.github.com/users/dakotabenjamin/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/dakotabenjamin/subscriptions","organizations_url":"https://api.github.com/users/dakotabenjamin/orgs","repos_url":"https://api.github.com/users/dakotabenjamin/repos","events_url":"https://api.github.com/users/dakotabenjamin/events{/privacy}","received_events_url":"https://api.github.com/users/dakotabenjamin/received_events","type":"User","site_admin":false},"labels":[],"state":"open","locked":false,"assignee":null,"milestone":null,"comments":11,"created_at":"2015-12-04T19:58:44Z","updated_at":"2015-12-15T19:43:27Z","closed_at":null,"body":"On a fresh machine, I cloned the repo and ran ./configure.sh. It failed, so I went into SuperBuild/build, deleted everythin and ran `cmake .. && make -j 32 > build.log 2>&1`\r\n\r\nCheck the [gist](https://gist.github.com/dakotabenjamin/3919eac091c941c380ad)\r\n\r\nIt seems like pcl finished, but I can't really navigate around this new system. "},"comment":{"url":"https://api.github.com/repos/edgarriba/OpenDroneMap/issues/comments/164873862","html_url":"https://github.com/edgarriba/OpenDroneMap/issues/9#issuecomment-164873862","issue_url":"https://api.github.com/repos/edgarriba/OpenDroneMap/issues/9","id":164873862,"user":{"login":"dakotabenjamin","id":1847818,"avatar_url":"https://avatars.githubusercontent.com/u/1847818?v=3","gravatar_id":"","url":"https://api.github.com/users/dakotabenjamin","html_url":"https://github.com/dakotabenjamin","followers_url":"https://api.github.com/users/dakotabenjamin/followers","following_url":"https://api.github.com/users/dakotabenjamin/following{/other_user}","gists_url":"https://api.github.com/users/dakotabenjamin/gists{/gist_id}","starred_url":"https://api.github.com/users/dakotabenjamin/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/dakotabenjamin/subscriptions","organizations_url":"https://api.github.com/users/dakotabenjamin/orgs","repos_url":"https://api.github.com/users/dakotabenjamin/repos","events_url":"https://api.github.com/users/dakotabenjamin/events{/privacy}","received_events_url":"https://api.github.com/users/dakotabenjamin/received_events","type":"User","site_admin":false},"created_at":"2015-12-15T19:43:27Z","updated_at":"2015-12-15T19:43:27Z","body":"That part worked, but I'm still unable to make ceres. The error is enigmatic:\r\n```\r\n-- Installing: /home/vagrant/odm/SuperBuild/install/include/ceres/internal/fixed_array.h\r\n-- Installing: /home/vagrant/odm/SuperBuild/install/include/ceres/internal/disable_warnings.h\r\n-- Installing: /home/vagrant/odm/SuperBuild/install/include/ceres/internal/config.h\r\n-- Installing: /home/vagrant/odm/SuperBuild/install/share/Ceres/CeresTargets.cmake\r\n-- Installing: /home/vagrant/odm/SuperBuild/install/share/Ceres/CeresTargets-release.cmake\r\n-- Installing: /home/vagrant/odm/SuperBuild/install/share/Ceres/CeresConfig.cmake\r\n-- Installing: /home/vagrant/odm/SuperBuild/install/share/Ceres/CeresConfigVersion.cmake\r\n-- Installing: /home/vagrant/odm/SuperBuild/install/share/Ceres/FindEigen.cmake\r\n-- Installing: /home/vagrant/odm/SuperBuild/install/share/Ceres/FindGlog.cmake\r\n-- Installing: /home/vagrant/odm/SuperBuild/install/lib/libceres.a\r\n[ 72%] Completed 'ceres'\r\n[ 72%] Built target ceres\r\nmake: *** [all] Error 2\r\nScript finished\r\n```\r\nfrom CMakeError.log\r\n```\r\nDetermining if the pthread_create exist failed with the following output:\r\nChange Dir: /home/vagrant/odm/SuperBuild/build/ceres/CMakeFiles/CMakeTmp\r\n\r\nRun Build Command:/usr/bin/make \"cmTryCompileExec3169035159/fast\"\r\nmake[3]: Entering directory `/home/vagrant/odm/SuperBuild/build/ceres/CMakeFiles/CMakeTmp'\r\n/usr/bin/make -f CMakeFiles/cmTryCompileExec3169035159.dir/build.make CMakeFiles/cmTryCompileExec3169035159.d\r\nmake[4]: Entering directory `/home/vagrant/odm/SuperBuild/build/ceres/CMakeFiles/CMakeTmp'\r\n/usr/bin/cmake -E cmake_progress_report /home/vagrant/odm/SuperBuild/build/ceres/CMakeFiles/CMakeTmp/CMakeFil\r\nBuilding C object CMakeFiles/cmTryCompileExec3169035159.dir/CheckSymbolExists.c.o\r\n/usr/bin/cc   -fPIC    -o CMakeFiles/cmTryCompileExec3169035159.dir/CheckSymbolExists.c.o   -c /home/vagrant/\r\nild/build/ceres/CMakeFiles/CMakeTmp/CheckSymbolExists.c\r\nLinking C executable cmTryCompileExec3169035159\r\n/usr/bin/cmake -E cmake_link_script CMakeFiles/cmTryCompileExec3169035159.dir/link.txt --verbose=1\r\n/usr/bin/cc  -fPIC     CMakeFiles/cmTryCompileExec3169035159.dir/CheckSymbolExists.c.o  -o cmTryCompileExec31\r\ndynamic\r\nCMakeFiles/cmTryCompileExec3169035159.dir/CheckSymbolExists.c.o: In function `main':\r\nCheckSymbolExists.c:(.text+0x1b): undefined reference to `pthread_create'\r\ncollect2: error: ld returned 1 exit status\r\nmake[4]: Leaving directory `/home/vagrant/odm/SuperBuild/build/ceres/CMakeFiles/CMakeTmp'\r\nmake[4]: *** [cmTryCompileExec3169035159] Error 1\r\nmake[3]: Leaving directory `/home/vagrant/odm/SuperBuild/build/ceres/CMakeFiles/CMakeTmp'\r\nmake[3]: *** [cmTryCompileExec3169035159/fast] Error 2\r\n\r\nFile /home/vagrant/odm/SuperBuild/build/ceres/CMakeFiles/CMakeTmp/CheckSymbolExists.c:\r\n/* */\r\n#include <pthread.h>\r\n\r\nint main(int argc, char** argv)\r\n{\r\n  (void)argv;\r\n#ifndef pthread_create\r\n  return ((int*)(&pthread_create))[argc];\r\n#else\r\n  (void)argc;\r\n  return 0;\r\n#endif\r\n}\r\n\r\nDetermining if the function pthread_create exists in the pthreads failed with the following output:\r\nChange Dir: /home/vagrant/odm/SuperBuild/build/ceres/CMakeFiles/CMakeTmp\r\n\r\nRun Build Command:/usr/bin/make \"cmTryCompileExec1386438786/fast\"\r\nmake[3]: Entering directory `/home/vagrant/odm/SuperBuild/build/ceres/CMakeFiles/CMakeTmp'\r\n/usr/bin/make -f CMakeFiles/cmTryCompileExec1386438786.dir/build.make CMakeFiles/cmTryCompileExec1386438786.d\r\nmake[4]: Entering directory `/home/vagrant/odm/SuperBuild/build/ceres/CMakeFiles/CMakeTmp'\r\n/usr/bin/cmake -E cmake_progress_report /home/vagrant/odm/SuperBuild/build/ceres/CMakeFiles/CMakeTmp/CMakeFil\r\nBuilding C object CMakeFiles/cmTryCompileExec1386438786.dir/CheckFunctionExists.c.o\r\n/usr/bin/cc   -fPIC -DCHECK_FUNCTION_EXISTS=pthread_create   -o CMakeFiles/cmTryCompileExec1386438786.dir/Che\r\nxists.c.o   -c /usr/share/cmake-2.8/Modules/CheckFunctionExists.c\r\nLinking C executable cmTryCompileExec1386438786\r\n/usr/bin/cmake -E cmake_link_script CMakeFiles/cmTryCompileExec1386438786.dir/link.txt --verbose=1\r\n/usr/bin/cc  -fPIC -DCHECK_FUNCTION_EXISTS=pthread_create    CMakeFiles/cmTryCompileExec1386438786.dir/CheckF\r\nts.c.o  -o cmTryCompileExec1386438786 -rdynamic -lpthreads\r\n/usr/bin/ld: cannot find -lpthreads\r\ncollect2: error: ld returned 1 exit status\r\nmake[4]: Leaving directory `/home/vagrant/odm/SuperBuild/build/ceres/CMakeFiles/CMakeTmp'\r\nmake[4]: *** [cmTryCompileExec1386438786] Error 1\r\nmake[3]: Leaving directory `/home/vagrant/odm/SuperBuild/build/ceres/CMakeFiles/CMakeTmp'\r\nmake[3]: *** [cmTryCompileExec1386438786/fast] Error 2\r\n\r\n\r\nDetermining if the include file unordered_map exists failed with the following output:\r\nChange Dir: /home/vagrant/odm/SuperBuild/build/ceres/CMakeFiles/CMakeTmp\r\n\r\nRun Build Command:/usr/bin/make \"cmTryCompileExec3050822260/fast\"\r\nmake[3]: Entering directory `/home/vagrant/odm/SuperBuild/build/ceres/CMakeFiles/CMakeTmp'\r\n/usr/bin/make -f CMakeFiles/cmTryCompileExec3050822260.dir/build.make CMakeFiles/cmTryCompileExec3050822260.d\r\nmake[4]: Entering directory `/home/vagrant/odm/SuperBuild/build/ceres/CMakeFiles/CMakeTmp'\r\n/usr/bin/cmake -E cmake_progress_report /home/vagrant/odm/SuperBuild/build/ceres/CMakeFiles/CMakeTmp/CMakeFil\r\nBuilding CXX object CMakeFiles/cmTryCompileExec3050822260.dir/CheckIncludeFile.cxx.o\r\n/usr/bin/c++    -fPIC -fopenmp    -o CMakeFiles/cmTryCompileExec3050822260.dir/CheckIncludeFile.cxx.o -c /hom\r\ndm/SuperBuild/build/ceres/CMakeFiles/CMakeTmp/CheckIncludeFile.cxx\r\nIn file included from /usr/include/c++/4.8/unordered_map:35:0,\r\n                 from /home/vagrant/odm/SuperBuild/build/ceres/CMakeFiles/CMakeTmp/CheckIncludeFile.cxx:1:\r\n/usr/include/c++/4.8/bits/c++0x_warning.h:32:2: error: #error This file requires compiler and library support\r\nO C++ 2011 standard. This support is currently experimental, and must be enabled with the -std=c++11 or -std=\r\npiler options.\r\n #error This file requires compiler and library support for the \\\r\n  ^\r\nmake[4]: *** [CMakeFiles/cmTryCompileExec3050822260.dir/CheckIncludeFile.cxx.o] Error 1\r\nmake[4]: Leaving directory `/home/vagrant/odm/SuperBuild/build/ceres/CMakeFiles/CMakeTmp'\r\nmake[3]: Leaving directory `/home/vagrant/odm/SuperBuild/build/ceres/CMakeFiles/CMakeTmp'\r\nmake[3]: *** [cmTryCompileExec3050822260/fast] Error 2\r\n\r\n\r\nPerforming C++ SOURCE FILE Test HAVE_SHARED_PTR_IN_STD_NAMESPACE failed with the following output:\r\nChange Dir: /home/vagrant/odm/SuperBuild/build/ceres/CMakeFiles/CMakeTmp\r\n\r\nRun Build Command:/usr/bin/make \"cmTryCompileExec4030429808/fast\"\r\nmake[3]: Entering directory `/home/vagrant/odm/SuperBuild/build/ceres/CMakeFiles/CMakeTmp'\r\n/usr/bin/make -f CMakeFiles/cmTryCompileExec4030429808.dir/build.make CMakeFiles/cmTryCompileExec4030429808.d\r\nmake[4]: Entering directory `/home/vagrant/odm/SuperBuild/build/ceres/CMakeFiles/CMakeTmp'\r\n/usr/bin/cmake -E cmake_progress_report /home/vagrant/odm/SuperBuild/build/ceres/CMakeFiles/CMakeTmp/CMakeFil\r\nBuilding CXX object CMakeFiles/cmTryCompileExec4030429808.dir/src.cxx.o\r\n/usr/bin/c++    -fPIC -fopenmp -DHAVE_SHARED_PTR_IN_STD_NAMESPACE   -o CMakeFiles/cmTryCompileExec4030429808.\r\n.o -c /home/vagrant/odm/SuperBuild/build/ceres/CMakeFiles/CMakeTmp/src.cxx\r\n/home/vagrant/odm/SuperBuild/build/ceres/CMakeFiles/CMakeTmp/src.cxx: In function ‘int main()’:\r\n/home/vagrant/odm/SuperBuild/build/ceres/CMakeFiles/CMakeTmp/src.cxx:3:34: error: ‘shared_ptr’ is not a membe\r\n                                  std::shared_ptr<int> int_ptr;\r\n                                  ^\r\n/home/vagrant/odm/SuperBuild/build/ceres/CMakeFiles/CMakeTmp/src.cxx:3:50: error: expected primary-expression\r\nt’\r\n                                  std::shared_ptr<int> int_ptr;\r\n                                                  ^\r\n/home/vagrant/odm/SuperBuild/build/ceres/CMakeFiles/CMakeTmp/src.cxx:3:50: error: expected ‘;’ before ‘int’\r\nmake[4]: Leaving directory `/home/vagrant/odm/SuperBuild/build/ceres/CMakeFiles/CMakeTmp'\r\nmake[4]: *** [CMakeFiles/cmTryCompileExec4030429808.dir/src.cxx.o] Error 1\r\nmake[3]: Leaving directory `/home/vagrant/odm/SuperBuild/build/ceres/CMakeFiles/CMakeTmp'\r\nmake[3]: *** [cmTryCompileExec4030429808/fast] Error 2\r\n\r\nSource file was:\r\n#include <memory>\r\n                               int main() {\r\n                                 std::shared_ptr<int> int_ptr;\r\n                                 return 0;\r\n                               }\r\nPerforming C++ SOURCE FILE Test HAVE_SHARED_PTR_IN_TR1_NAMESPACE failed with the following output:\r\nChange Dir: /home/vagrant/odm/SuperBuild/build/ceres/CMakeFiles/CMakeTmp\r\n\r\nRun Build Command:/usr/bin/make \"cmTryCompileExec2926189506/fast\"\r\nmake[3]: Entering directory `/home/vagrant/odm/SuperBuild/build/ceres/CMakeFiles/CMakeTmp'\r\n/usr/bin/make -f CMakeFiles/cmTryCompileExec2926189506.dir/build.make CMakeFiles/cmTryCompileExec2926189506.d\r\nmake[4]: Entering directory `/home/vagrant/odm/SuperBuild/build/ceres/CMakeFiles/CMakeTmp'\r\n/usr/bin/cmake -E cmake_progress_report /home/vagrant/odm/SuperBuild/build/ceres/CMakeFiles/CMakeTmp/CMakeFil\r\nBuilding CXX object CMakeFiles/cmTryCompileExec2926189506.dir/src.cxx.o\r\n/usr/bin/c++    -fPIC -fopenmp -DHAVE_SHARED_PTR_IN_TR1_NAMESPACE   -o CMakeFiles/cmTryCompileExec2926189506.\r\n.o -c /home/vagrant/odm/SuperBuild/build/ceres/CMakeFiles/CMakeTmp/src.cxx\r\n/home/vagrant/odm/SuperBuild/build/ceres/CMakeFiles/CMakeTmp/src.cxx: In function ‘int main()’:\r\n/home/vagrant/odm/SuperBuild/build/ceres/CMakeFiles/CMakeTmp/src.cxx:3:41: error: ‘std::tr1’ has not been dec\r\n                                    std::tr1::shared_ptr<int> int_ptr;\r\n                                         ^\r\n/home/vagrant/odm/SuperBuild/build/ceres/CMakeFiles/CMakeTmp/src.cxx:3:57: error: expected primary-expression\r\nt’\r\n                                    std::tr1::shared_ptr<int> int_ptr;\r\n                                                         ^\r\n/home/vagrant/odm/SuperBuild/build/ceres/CMakeFiles/CMakeTmp/src.cxx:3:57: error: expected ‘;’ before ‘int’\r\nmake[4]: Leaving directory `/home/vagrant/odm/SuperBuild/build/ceres/CMakeFiles/CMakeTmp'\r\nmake[4]: *** [CMakeFiles/cmTryCompileExec2926189506.dir/src.cxx.o] Error 1\r\nmake[3]: Leaving directory `/home/vagrant/odm/SuperBuild/build/ceres/CMakeFiles/CMakeTmp'\r\nmake[3]: *** [cmTryCompileExec2926189506/fast] Error 2\r\n\r\nSource file was:\r\n#include <memory>\r\n                                 int main() {\r\n                                   std::tr1::shared_ptr<int> int_ptr;\r\n                                   return 0;\r\n                                 }\r\n```"}}