{"action":"created","issue":{"url":"https://api.github.com/repos/galaxyproject/tools-devteam/issues/174","labels_url":"https://api.github.com/repos/galaxyproject/tools-devteam/issues/174/labels{/name}","comments_url":"https://api.github.com/repos/galaxyproject/tools-devteam/issues/174/comments","events_url":"https://api.github.com/repos/galaxyproject/tools-devteam/issues/174/events","html_url":"https://github.com/galaxyproject/tools-devteam/issues/174","id":93014192,"number":174,"title":"Sam_to_bam - make reference genome selection optional","user":{"login":"scholtalbers","id":102411,"avatar_url":"https://avatars.githubusercontent.com/u/102411?v=3","gravatar_id":"","url":"https://api.github.com/users/scholtalbers","html_url":"https://github.com/scholtalbers","followers_url":"https://api.github.com/users/scholtalbers/followers","following_url":"https://api.github.com/users/scholtalbers/following{/other_user}","gists_url":"https://api.github.com/users/scholtalbers/gists{/gist_id}","starred_url":"https://api.github.com/users/scholtalbers/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/scholtalbers/subscriptions","organizations_url":"https://api.github.com/users/scholtalbers/orgs","repos_url":"https://api.github.com/users/scholtalbers/repos","events_url":"https://api.github.com/users/scholtalbers/events{/privacy}","received_events_url":"https://api.github.com/users/scholtalbers/received_events","type":"User","site_admin":false},"labels":[],"state":"open","locked":false,"assignee":null,"milestone":null,"comments":1,"created_at":"2015-07-04T13:52:52Z","updated_at":"2015-08-01T21:55:42Z","closed_at":null,"body":"Most SAM files will have the header and so samtools does not need the reference, therefor the reference genome selection could or should be optional."},"comment":{"url":"https://api.github.com/repos/galaxyproject/tools-devteam/issues/comments/126956419","html_url":"https://github.com/galaxyproject/tools-devteam/issues/174#issuecomment-126956419","issue_url":"https://api.github.com/repos/galaxyproject/tools-devteam/issues/174","id":126956419,"user":{"login":"bgruening","id":469983,"avatar_url":"https://avatars.githubusercontent.com/u/469983?v=3","gravatar_id":"","url":"https://api.github.com/users/bgruening","html_url":"https://github.com/bgruening","followers_url":"https://api.github.com/users/bgruening/followers","following_url":"https://api.github.com/users/bgruening/following{/other_user}","gists_url":"https://api.github.com/users/bgruening/gists{/gist_id}","starred_url":"https://api.github.com/users/bgruening/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/bgruening/subscriptions","organizations_url":"https://api.github.com/users/bgruening/orgs","repos_url":"https://api.github.com/users/bgruening/repos","events_url":"https://api.github.com/users/bgruening/events{/privacy}","received_events_url":"https://api.github.com/users/bgruening/received_events","type":"User","site_admin":false},"created_at":"2015-08-01T21:55:42Z","updated_at":"2015-08-01T21:55:42Z","body":"xref: https://github.com/galaxyproject/tools-devteam/blob/master/tool_collections/samtools/sam_to_bam/sam_to_bam.xml"}}