{"action":"created","issue":{"url":"https://api.github.com/repos/mne-tools/mne-python/issues/2072","labels_url":"https://api.github.com/repos/mne-tools/mne-python/issues/2072/labels{/name}","comments_url":"https://api.github.com/repos/mne-tools/mne-python/issues/2072/comments","events_url":"https://api.github.com/repos/mne-tools/mne-python/issues/2072/events","html_url":"https://github.com/mne-tools/mne-python/pull/2072","id":74340117,"number":2072,"title":"MRG: GAT small fixes","user":{"login":"kingjr","id":4881164,"avatar_url":"https://avatars.githubusercontent.com/u/4881164?v=3","gravatar_id":"","url":"https://api.github.com/users/kingjr","html_url":"https://github.com/kingjr","followers_url":"https://api.github.com/users/kingjr/followers","following_url":"https://api.github.com/users/kingjr/following{/other_user}","gists_url":"https://api.github.com/users/kingjr/gists{/gist_id}","starred_url":"https://api.github.com/users/kingjr/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/kingjr/subscriptions","organizations_url":"https://api.github.com/users/kingjr/orgs","repos_url":"https://api.github.com/users/kingjr/repos","events_url":"https://api.github.com/users/kingjr/events{/privacy}","received_events_url":"https://api.github.com/users/kingjr/received_events","type":"User","site_admin":false},"labels":[],"state":"open","locked":false,"assignee":null,"milestone":{"url":"https://api.github.com/repos/mne-tools/mne-python/milestones/5","html_url":"https://github.com/mne-tools/mne-python/milestones/0.9","labels_url":"https://api.github.com/repos/mne-tools/mne-python/milestones/5/labels","id":1011721,"number":5,"title":"0.9","description":null,"creator":{"login":"Eric89GXL","id":2365790,"avatar_url":"https://avatars.githubusercontent.com/u/2365790?v=3","gravatar_id":"","url":"https://api.github.com/users/Eric89GXL","html_url":"https://github.com/Eric89GXL","followers_url":"https://api.github.com/users/Eric89GXL/followers","following_url":"https://api.github.com/users/Eric89GXL/following{/other_user}","gists_url":"https://api.github.com/users/Eric89GXL/gists{/gist_id}","starred_url":"https://api.github.com/users/Eric89GXL/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/Eric89GXL/subscriptions","organizations_url":"https://api.github.com/users/Eric89GXL/orgs","repos_url":"https://api.github.com/users/Eric89GXL/repos","events_url":"https://api.github.com/users/Eric89GXL/events{/privacy}","received_events_url":"https://api.github.com/users/Eric89GXL/received_events","type":"User","site_admin":false},"open_issues":2,"closed_issues":133,"state":"open","created_at":"2015-03-09T03:10:39Z","updated_at":"2015-05-12T22:59:58Z","due_on":null,"closed_at":null},"comments":28,"created_at":"2015-05-08T12:00:06Z","updated_at":"2015-05-13T02:23:09Z","closed_at":null,"pull_request":{"url":"https://api.github.com/repos/mne-tools/mne-python/pulls/2072","html_url":"https://github.com/mne-tools/mne-python/pull/2072","diff_url":"https://github.com/mne-tools/mne-python/pull/2072.diff","patch_url":"https://github.com/mne-tools/mne-python/pull/2072.patch"},"body":"This PR aims at cleaning up, testing and enhancing small features of the GAT.\r\n* By default, the classifier is changed from an SVC to a LogisticRegression to improve memory load and computation time. (SVC keeps all support vectors, and make the gat object quite heavy)\r\n* The ```picks``` parameters is now removed and gat has a new attribute `ch_names`\r\n* The size of the prediction is now estimated from the first prediction. (In most use cases, this sizes is equal to 1, but for some prediction (derived from predict_proba or decision_function for instance), we can get higher ```y_pred``` dimensionality\r\n* The basic plots are improved:  1. chance level is estimated from the classifier,  2. the default ```ylim``` is empirically derived ([0 1] doesn't fit many classifiers) 3. a new plot gat.plot_slice(train_time) is added to allow users to make a non-diagonal slice of the gat matrix (as in King et al PLoS One). => Perhaps we should add this to the example?\r\n* Some more test to the plotting function.\r\n\r\nI'll keep to separate PR:\r\n* TimeResolvedDecoding\r\n* logarithmic level for >2 class plots"},"comment":{"url":"https://api.github.com/repos/mne-tools/mne-python/issues/comments/101485086","html_url":"https://github.com/mne-tools/mne-python/pull/2072#issuecomment-101485086","issue_url":"https://api.github.com/repos/mne-tools/mne-python/issues/2072","id":101485086,"user":{"login":"coveralls","id":2354108,"avatar_url":"https://avatars.githubusercontent.com/u/2354108?v=3","gravatar_id":"","url":"https://api.github.com/users/coveralls","html_url":"https://github.com/coveralls","followers_url":"https://api.github.com/users/coveralls/followers","following_url":"https://api.github.com/users/coveralls/following{/other_user}","gists_url":"https://api.github.com/users/coveralls/gists{/gist_id}","starred_url":"https://api.github.com/users/coveralls/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/coveralls/subscriptions","organizations_url":"https://api.github.com/users/coveralls/orgs","repos_url":"https://api.github.com/users/coveralls/repos","events_url":"https://api.github.com/users/coveralls/events{/privacy}","received_events_url":"https://api.github.com/users/coveralls/received_events","type":"User","site_admin":false},"created_at":"2015-05-13T02:23:09Z","updated_at":"2015-05-13T02:23:09Z","body":"\n[![Coverage Status](https://coveralls.io/builds/2549771/badge)](https://coveralls.io/builds/2549771)\n\nCoverage decreased (-0.08%) to 90.24% when pulling **d476bb0ab4ae9157579659bddb95e1c088fde252 on kingjr:gat_small_fixes** into **7f8071891d7a8c2fdaa61ea3a8819394fcd86de2 on mne-tools:master**.\n"}}