{"action":"closed","issue":{"url":"https://api.github.com/repos/MDAnalysis/mdanalysis/issues/325","labels_url":"https://api.github.com/repos/MDAnalysis/mdanalysis/issues/325/labels{/name}","comments_url":"https://api.github.com/repos/MDAnalysis/mdanalysis/issues/325/comments","events_url":"https://api.github.com/repos/MDAnalysis/mdanalysis/issues/325/events","html_url":"https://github.com/MDAnalysis/mdanalysis/issues/325","id":90466556,"number":325,"title":"broken LaTeX in PSA docs","user":{"login":"orbeckst","id":237980,"avatar_url":"https://avatars.githubusercontent.com/u/237980?v=3","gravatar_id":"","url":"https://api.github.com/users/orbeckst","html_url":"https://github.com/orbeckst","followers_url":"https://api.github.com/users/orbeckst/followers","following_url":"https://api.github.com/users/orbeckst/following{/other_user}","gists_url":"https://api.github.com/users/orbeckst/gists{/gist_id}","starred_url":"https://api.github.com/users/orbeckst/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/orbeckst/subscriptions","organizations_url":"https://api.github.com/users/orbeckst/orgs","repos_url":"https://api.github.com/users/orbeckst/repos","events_url":"https://api.github.com/users/orbeckst/events{/privacy}","received_events_url":"https://api.github.com/users/orbeckst/received_events","type":"User","site_admin":false},"labels":[{"url":"https://api.github.com/repos/MDAnalysis/mdanalysis/labels/Component-Docs","name":"Component-Docs","color":"009800"}],"state":"closed","locked":false,"assignee":{"login":"orbeckst","id":237980,"avatar_url":"https://avatars.githubusercontent.com/u/237980?v=3","gravatar_id":"","url":"https://api.github.com/users/orbeckst","html_url":"https://github.com/orbeckst","followers_url":"https://api.github.com/users/orbeckst/followers","following_url":"https://api.github.com/users/orbeckst/following{/other_user}","gists_url":"https://api.github.com/users/orbeckst/gists{/gist_id}","starred_url":"https://api.github.com/users/orbeckst/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/orbeckst/subscriptions","organizations_url":"https://api.github.com/users/orbeckst/orgs","repos_url":"https://api.github.com/users/orbeckst/repos","events_url":"https://api.github.com/users/orbeckst/events{/privacy}","received_events_url":"https://api.github.com/users/orbeckst/received_events","type":"User","site_admin":false},"milestone":{"url":"https://api.github.com/repos/MDAnalysis/mdanalysis/milestones/3","html_url":"https://github.com/MDAnalysis/mdanalysis/milestones/0.11","labels_url":"https://api.github.com/repos/MDAnalysis/mdanalysis/milestones/3/labels","id":1076757,"number":3,"title":"0.11","description":"API overhaul release","creator":{"login":"richardjgowers","id":9249543,"avatar_url":"https://avatars.githubusercontent.com/u/9249543?v=3","gravatar_id":"","url":"https://api.github.com/users/richardjgowers","html_url":"https://github.com/richardjgowers","followers_url":"https://api.github.com/users/richardjgowers/followers","following_url":"https://api.github.com/users/richardjgowers/following{/other_user}","gists_url":"https://api.github.com/users/richardjgowers/gists{/gist_id}","starred_url":"https://api.github.com/users/richardjgowers/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/richardjgowers/subscriptions","organizations_url":"https://api.github.com/users/richardjgowers/orgs","repos_url":"https://api.github.com/users/richardjgowers/repos","events_url":"https://api.github.com/users/richardjgowers/events{/privacy}","received_events_url":"https://api.github.com/users/richardjgowers/received_events","type":"User","site_admin":false},"open_issues":14,"closed_issues":20,"state":"open","created_at":"2015-04-21T09:19:32Z","updated_at":"2015-06-23T19:27:59Z","due_on":"2015-06-30T07:00:00Z","closed_at":null},"comments":0,"created_at":"2015-06-23T19:04:54Z","updated_at":"2015-06-23T19:27:59Z","closed_at":"2015-06-23T19:27:59Z","body":"In 4a3bdd15d0f4e199dca11100fe8f65ab03161cfa I moved duplicated [reST substitution rules](http://sphinx-doc.org/rest.html#substitutions) out of method reSt strings. The rules contain backslashed characters such as `\\times` which are only correctly interpreted when stored in raw strings such as `r\"\"\"\\times\"\"\"`. It seems that the commit 4a3bdd15d0f4e199dca11100fe8f65ab03161cfa broke the proper reST formatting as seen, for example in the docs for [psa.generate_paths()](http://www.mdanalysis.org/mdanalysis/package/doc/html/documentation_pages/analysis/psa.html#MDAnalysis.analysis.psa.PSA.generate_paths) which now shows `imes` (interpreting `\"\\t\"` as a tabstop, I suppose).\r\n\r\nIt should be possible to define substitution rules globally that work."}}