{"action":"created","issue":{"url":"https://api.github.com/repos/PacificBiosciences/FALCON/issues/62","labels_url":"https://api.github.com/repos/PacificBiosciences/FALCON/issues/62/labels{/name}","comments_url":"https://api.github.com/repos/PacificBiosciences/FALCON/issues/62/comments","events_url":"https://api.github.com/repos/PacificBiosciences/FALCON/issues/62/events","html_url":"https://github.com/PacificBiosciences/FALCON/issues/62","id":74278366,"number":62,"title":"Losing a lot of reads in raw_reads.db","user":{"login":"chklopp","id":4004727,"avatar_url":"https://avatars.githubusercontent.com/u/4004727?v=3","gravatar_id":"","url":"https://api.github.com/users/chklopp","html_url":"https://github.com/chklopp","followers_url":"https://api.github.com/users/chklopp/followers","following_url":"https://api.github.com/users/chklopp/following{/other_user}","gists_url":"https://api.github.com/users/chklopp/gists{/gist_id}","starred_url":"https://api.github.com/users/chklopp/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/chklopp/subscriptions","organizations_url":"https://api.github.com/users/chklopp/orgs","repos_url":"https://api.github.com/users/chklopp/repos","events_url":"https://api.github.com/users/chklopp/events{/privacy}","received_events_url":"https://api.github.com/users/chklopp/received_events","type":"User","site_admin":false},"labels":[],"state":"open","locked":false,"assignee":null,"milestone":null,"comments":3,"created_at":"2015-05-08T08:16:00Z","updated_at":"2015-05-14T05:43:07Z","closed_at":null,"body":"Hi,\r\n\r\nWhat could explain the important read loss in the first step of Falcon : \r\n\r\nDBstats raw_reads.db\r\nStatistics for all wells in the data set\r\n\r\n      1,655,303 reads       out of       4,099,447    59.6% loss\r\n 13,561,952,097 base pairs  out of  24,496,694,744    44.6% loss\r\n\r\nBase composition: 0.336(A) 0.192(C) 0.181(G) 0.291(T)\r\n\r\n          8,193 average read length\r\n          4,246 standard deviation\r\n\r\nCheers,\r\n\r\nChristophe"},"comment":{"url":"https://api.github.com/repos/PacificBiosciences/FALCON/issues/comments/101920944","html_url":"https://github.com/PacificBiosciences/FALCON/issues/62#issuecomment-101920944","issue_url":"https://api.github.com/repos/PacificBiosciences/FALCON/issues/62","id":101920944,"user":{"login":"pb-jchin","id":1071734,"avatar_url":"https://avatars.githubusercontent.com/u/1071734?v=3","gravatar_id":"","url":"https://api.github.com/users/pb-jchin","html_url":"https://github.com/pb-jchin","followers_url":"https://api.github.com/users/pb-jchin/followers","following_url":"https://api.github.com/users/pb-jchin/following{/other_user}","gists_url":"https://api.github.com/users/pb-jchin/gists{/gist_id}","starred_url":"https://api.github.com/users/pb-jchin/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/pb-jchin/subscriptions","organizations_url":"https://api.github.com/users/pb-jchin/orgs","repos_url":"https://api.github.com/users/pb-jchin/repos","events_url":"https://api.github.com/users/pb-jchin/events{/privacy}","received_events_url":"https://api.github.com/users/pb-jchin/received_events","type":"User","site_admin":false},"created_at":"2015-05-14T05:43:07Z","updated_at":"2015-05-14T05:43:07Z","body":"Then, for whatever reason, you might have many shorter reads which gets \"trimmed\".."}}