{"action":"created","issue":{"url":"https://api.github.com/repos/iqbal-lab/Mykrobe-predictor/issues/90","labels_url":"https://api.github.com/repos/iqbal-lab/Mykrobe-predictor/issues/90/labels{/name}","comments_url":"https://api.github.com/repos/iqbal-lab/Mykrobe-predictor/issues/90/comments","events_url":"https://api.github.com/repos/iqbal-lab/Mykrobe-predictor/issues/90/events","html_url":"https://github.com/iqbal-lab/Mykrobe-predictor/pull/90","id":113590344,"number":90,"title":"Force resistance predictions if species is not target species. ","user":{"login":"Phelimb","id":629499,"avatar_url":"https://avatars.githubusercontent.com/u/629499?v=3","gravatar_id":"","url":"https://api.github.com/users/Phelimb","html_url":"https://github.com/Phelimb","followers_url":"https://api.github.com/users/Phelimb/followers","following_url":"https://api.github.com/users/Phelimb/following{/other_user}","gists_url":"https://api.github.com/users/Phelimb/gists{/gist_id}","starred_url":"https://api.github.com/users/Phelimb/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/Phelimb/subscriptions","organizations_url":"https://api.github.com/users/Phelimb/orgs","repos_url":"https://api.github.com/users/Phelimb/repos","events_url":"https://api.github.com/users/Phelimb/events{/privacy}","received_events_url":"https://api.github.com/users/Phelimb/received_events","type":"User","site_admin":false},"labels":[],"state":"open","locked":false,"assignee":null,"milestone":null,"comments":18,"created_at":"2015-10-27T14:04:42Z","updated_at":"2015-10-29T13:42:17Z","closed_at":null,"pull_request":{"url":"https://api.github.com/repos/iqbal-lab/Mykrobe-predictor/pulls/90","html_url":"https://github.com/iqbal-lab/Mykrobe-predictor/pull/90","diff_url":"https://github.com/iqbal-lab/Mykrobe-predictor/pull/90.diff","patch_url":"https://github.com/iqbal-lab/Mykrobe-predictor/pull/90.patch"},"body":""},"comment":{"url":"https://api.github.com/repos/iqbal-lab/Mykrobe-predictor/issues/comments/152182626","html_url":"https://github.com/iqbal-lab/Mykrobe-predictor/pull/90#issuecomment-152182626","issue_url":"https://api.github.com/repos/iqbal-lab/Mykrobe-predictor/issues/90","id":152182626,"user":{"login":"Phelimb","id":629499,"avatar_url":"https://avatars.githubusercontent.com/u/629499?v=3","gravatar_id":"","url":"https://api.github.com/users/Phelimb","html_url":"https://github.com/Phelimb","followers_url":"https://api.github.com/users/Phelimb/followers","following_url":"https://api.github.com/users/Phelimb/following{/other_user}","gists_url":"https://api.github.com/users/Phelimb/gists{/gist_id}","starred_url":"https://api.github.com/users/Phelimb/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/Phelimb/subscriptions","organizations_url":"https://api.github.com/users/Phelimb/orgs","repos_url":"https://api.github.com/users/Phelimb/repos","events_url":"https://api.github.com/users/Phelimb/events{/privacy}","received_events_url":"https://api.github.com/users/Phelimb/received_events","type":"User","site_admin":false},"created_at":"2015-10-29T13:42:17Z","updated_at":"2015-10-29T13:42:17Z","body":"Test out your fix on the 3 datasets.\r\nAlso, your fix - underlying you have an assumption that the same gene causes resistance in different organsisms (is reasonable), but also for SNPs. Prob true-ish, but don't know for sure. For MTBC/NTM, I don't know.\r\n\r\nI'm not really assuming that  the same gene causes resistance in different organisms. I'm just saying that it's more likely than not that S. aureus has the gene. The fact that Epi probably also has is only an aside.  "}}