{"action":"created","issue":{"url":"https://api.github.com/repos/alimanfoo/pysamstats/issues/42","labels_url":"https://api.github.com/repos/alimanfoo/pysamstats/issues/42/labels{/name}","comments_url":"https://api.github.com/repos/alimanfoo/pysamstats/issues/42/comments","events_url":"https://api.github.com/repos/alimanfoo/pysamstats/issues/42/events","html_url":"https://github.com/alimanfoo/pysamstats/issues/42","id":64353965,"number":42,"title":"Fails to compile on Ubuntu 14.04 (python 2.7.6)","user":{"login":"eco32i","id":4699600,"avatar_url":"https://avatars.githubusercontent.com/u/4699600?v=3","gravatar_id":"","url":"https://api.github.com/users/eco32i","html_url":"https://github.com/eco32i","followers_url":"https://api.github.com/users/eco32i/followers","following_url":"https://api.github.com/users/eco32i/following{/other_user}","gists_url":"https://api.github.com/users/eco32i/gists{/gist_id}","starred_url":"https://api.github.com/users/eco32i/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/eco32i/subscriptions","organizations_url":"https://api.github.com/users/eco32i/orgs","repos_url":"https://api.github.com/users/eco32i/repos","events_url":"https://api.github.com/users/eco32i/events{/privacy}","received_events_url":"https://api.github.com/users/eco32i/received_events","type":"User","site_admin":false},"labels":[],"state":"open","locked":false,"assignee":null,"milestone":null,"comments":14,"created_at":"2015-03-25T19:32:56Z","updated_at":"2015-06-29T23:24:56Z","closed_at":null,"body":"I have tried to install it in virtualenv against both pysam 0.8.1 and 0.8.2.1 and it fails:\r\n\r\n    Traceback (most recent call last):\r\n\r\n    File \"<string>\", line 17, in <module>\r\n\r\n    File \"/home/ilya/src/pysamstats/setup.py\", line 43, in <module>\r\n\r\n        ext_modules=cythonize(extensions),\r\n\r\n    File \"/home/ilya/.virtualenvs/pydata/local/lib/python2.7/site-packages/Cython/Build/Dependencies.py\",     line 840, in cythonize\r\n\r\n    cythonize_one(*args[1:])\r\n\r\n    File \"/home/ilya/.virtualenvs/pydata/local/lib/python2.7/site-packages/Cython/Build/Dependencies.py\", line 959, in cythonize_one\r\n\r\n      raise CompileError(None, pyx_file)\r\n \r\n    Cython.Compiler.Errors.CompileError: pysamstats.pyx\r\n\r\n    ----------------------------------------\r\n\r\nnumpy is 1.9.2 and cython is 0.21.2\r\n    "},"comment":{"url":"https://api.github.com/repos/alimanfoo/pysamstats/issues/comments/116878002","html_url":"https://github.com/alimanfoo/pysamstats/issues/42#issuecomment-116878002","issue_url":"https://api.github.com/repos/alimanfoo/pysamstats/issues/42","id":116878002,"user":{"login":"kyleabeauchamp","id":1900459,"avatar_url":"https://avatars.githubusercontent.com/u/1900459?v=3","gravatar_id":"","url":"https://api.github.com/users/kyleabeauchamp","html_url":"https://github.com/kyleabeauchamp","followers_url":"https://api.github.com/users/kyleabeauchamp/followers","following_url":"https://api.github.com/users/kyleabeauchamp/following{/other_user}","gists_url":"https://api.github.com/users/kyleabeauchamp/gists{/gist_id}","starred_url":"https://api.github.com/users/kyleabeauchamp/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/kyleabeauchamp/subscriptions","organizations_url":"https://api.github.com/users/kyleabeauchamp/orgs","repos_url":"https://api.github.com/users/kyleabeauchamp/repos","events_url":"https://api.github.com/users/kyleabeauchamp/events{/privacy}","received_events_url":"https://api.github.com/users/kyleabeauchamp/received_events","type":"User","site_admin":false},"created_at":"2015-06-29T23:24:56Z","updated_at":"2015-06-29T23:24:56Z","body":"Yes, IMHO looks like changes upstream in pysam are the root:\r\n\r\nMaster version:\r\nhttps://github.com/pysam-developers/pysam/blob/master/pysam/chtslib.pyx\r\n\r\nDiff:\r\nhttps://github.com/pysam-developers/pysam/commit/b9193ae61acb59553243c139e2a2cdf5a6c996a2\r\n\r\nVersion from around 0.8.1:\r\nhttps://github.com/pysam-developers/pysam/blob/b9193ae61acb59553243c139e2a2cdf5a6c996a2/pysam/chtslib.pxd"}}