{"action":"created","issue":{"url":"https://api.github.com/repos/charite/jannovar/issues/88","labels_url":"https://api.github.com/repos/charite/jannovar/issues/88/labels{/name}","comments_url":"https://api.github.com/repos/charite/jannovar/issues/88/comments","events_url":"https://api.github.com/repos/charite/jannovar/issues/88/events","html_url":"https://github.com/charite/jannovar/issues/88","id":54632526,"number":88,"title":"jannovar is prepending INFO with ;","user":{"login":"leipzig","id":147991,"avatar_url":"https://avatars.githubusercontent.com/u/147991?v=3","gravatar_id":"","url":"https://api.github.com/users/leipzig","html_url":"https://github.com/leipzig","followers_url":"https://api.github.com/users/leipzig/followers","following_url":"https://api.github.com/users/leipzig/following{/other_user}","gists_url":"https://api.github.com/users/leipzig/gists{/gist_id}","starred_url":"https://api.github.com/users/leipzig/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/leipzig/subscriptions","organizations_url":"https://api.github.com/users/leipzig/orgs","repos_url":"https://api.github.com/users/leipzig/repos","events_url":"https://api.github.com/users/leipzig/events{/privacy}","received_events_url":"https://api.github.com/users/leipzig/received_events","type":"User","site_admin":false},"labels":[{"url":"https://api.github.com/repos/charite/jannovar/labels/bug","name":"bug","color":"fc2929"}],"state":"open","locked":false,"assignee":{"login":"holtgrewe","id":521780,"avatar_url":"https://avatars.githubusercontent.com/u/521780?v=3","gravatar_id":"","url":"https://api.github.com/users/holtgrewe","html_url":"https://github.com/holtgrewe","followers_url":"https://api.github.com/users/holtgrewe/followers","following_url":"https://api.github.com/users/holtgrewe/following{/other_user}","gists_url":"https://api.github.com/users/holtgrewe/gists{/gist_id}","starred_url":"https://api.github.com/users/holtgrewe/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/holtgrewe/subscriptions","organizations_url":"https://api.github.com/users/holtgrewe/orgs","repos_url":"https://api.github.com/users/holtgrewe/repos","events_url":"https://api.github.com/users/holtgrewe/events{/privacy}","received_events_url":"https://api.github.com/users/holtgrewe/received_events","type":"User","site_admin":false},"milestone":{"url":"https://api.github.com/repos/charite/jannovar/milestones/2","labels_url":"https://api.github.com/repos/charite/jannovar/milestones/2/labels","id":835778,"number":2,"title":"1.0.0","description":"","creator":{"login":"holtgrewe","id":521780,"avatar_url":"https://avatars.githubusercontent.com/u/521780?v=3","gravatar_id":"","url":"https://api.github.com/users/holtgrewe","html_url":"https://github.com/holtgrewe","followers_url":"https://api.github.com/users/holtgrewe/followers","following_url":"https://api.github.com/users/holtgrewe/following{/other_user}","gists_url":"https://api.github.com/users/holtgrewe/gists{/gist_id}","starred_url":"https://api.github.com/users/holtgrewe/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/holtgrewe/subscriptions","organizations_url":"https://api.github.com/users/holtgrewe/orgs","repos_url":"https://api.github.com/users/holtgrewe/repos","events_url":"https://api.github.com/users/holtgrewe/events{/privacy}","received_events_url":"https://api.github.com/users/holtgrewe/received_events","type":"User","site_admin":false},"open_issues":2,"closed_issues":4,"state":"open","created_at":"2014-10-22T10:54:44Z","updated_at":"2015-01-19T14:21:20Z","due_on":null,"closed_at":null},"comments":2,"created_at":"2015-01-16T22:24:19Z","updated_at":"2015-01-19T19:26:28Z","closed_at":null,"body":"```\r\n#CHROM\tPOS\tID\tREF\tALT\tQUAL\tFILTER\tINFO\r\n1\t949696\tCI128669\tC\tCG\t.\t.\t;CLASS=DM;DNA=NM_005101.3:c.339dupG;EFFECT=STOPLOSS;GENE=ISG15;HGVS=ISG15:NM_005101.3:exon2:c.339dup:p.Leu114Alafs*?;MUT=ALT;STRAND=+\r\n```\r\nthis is causing parsing problems in VariantAnnotation, probably some other programs"},"comment":{"url":"https://api.github.com/repos/charite/jannovar/issues/comments/70546846","html_url":"https://github.com/charite/jannovar/issues/88#issuecomment-70546846","issue_url":"https://api.github.com/repos/charite/jannovar/issues/88","id":70546846,"user":{"login":"leipzig","id":147991,"avatar_url":"https://avatars.githubusercontent.com/u/147991?v=3","gravatar_id":"","url":"https://api.github.com/users/leipzig","html_url":"https://github.com/leipzig","followers_url":"https://api.github.com/users/leipzig/followers","following_url":"https://api.github.com/users/leipzig/following{/other_user}","gists_url":"https://api.github.com/users/leipzig/gists{/gist_id}","starred_url":"https://api.github.com/users/leipzig/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/leipzig/subscriptions","organizations_url":"https://api.github.com/users/leipzig/orgs","repos_url":"https://api.github.com/users/leipzig/repos","events_url":"https://api.github.com/users/leipzig/events{/privacy}","received_events_url":"https://api.github.com/users/leipzig/received_events","type":"User","site_admin":false},"created_at":"2015-01-19T19:26:28Z","updated_at":"2015-01-19T19:26:28Z","body":"it is caused by semicolons at the end\r\n```\r\n#CHROM\tPOS\tID\tREF\tALT\tQUAL\tFILTER\tINFO\r\n1\t949696\tCI128669\tC\tCG\t.\t.\tCLASS=DM;MUT=ALT;GENE=ISG15;STRAND=+;DNA=NM_005101.3:c.339dupG;\r\n1\t949739\tCM128668\tG\tT\t.\t.\tCLASS=DM;MUT=ALT;GENE=ISG15;STRAND=+;DNA=NM_005101.3:c.379G>T;PROT=NP_005092.1:p.E127*;\r\n```"}}