{"action":"created","issue":{"url":"https://api.github.com/repos/era7bio/bundles/issues/22","labels_url":"https://api.github.com/repos/era7bio/bundles/issues/22/labels{/name}","comments_url":"https://api.github.com/repos/era7bio/bundles/issues/22/comments","events_url":"https://api.github.com/repos/era7bio/bundles/issues/22/events","html_url":"https://github.com/era7bio/bundles/issues/22","id":118373999,"number":22,"title":"Add Trimgalore bundle to Era7 Bundles","user":{"login":"marina-manrique","id":828478,"avatar_url":"https://avatars.githubusercontent.com/u/828478?v=3","gravatar_id":"","url":"https://api.github.com/users/marina-manrique","html_url":"https://github.com/marina-manrique","followers_url":"https://api.github.com/users/marina-manrique/followers","following_url":"https://api.github.com/users/marina-manrique/following{/other_user}","gists_url":"https://api.github.com/users/marina-manrique/gists{/gist_id}","starred_url":"https://api.github.com/users/marina-manrique/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/marina-manrique/subscriptions","organizations_url":"https://api.github.com/users/marina-manrique/orgs","repos_url":"https://api.github.com/users/marina-manrique/repos","events_url":"https://api.github.com/users/marina-manrique/events{/privacy}","received_events_url":"https://api.github.com/users/marina-manrique/received_events","type":"User","site_admin":false},"labels":[],"state":"open","locked":false,"assignee":null,"milestone":null,"comments":3,"created_at":"2015-11-23T12:47:47Z","updated_at":"2015-11-23T13:04:37Z","closed_at":null,"body":"@eparejatobes @laughedelic I would need TrimGalore and Cutadapt for a project (`microixo`). The bundle to install them are already done [https://github.com/ohnosequences-bundles/trimgalore/blob/make/install/src/main/scala/trimgalore.scala](https://github.com/ohnosequences-bundles/trimgalore/blob/make/install/src/main/scala/trimgalore.scala), [https://github.com/ohnosequences-bundles/cutadapt/blob/master/src/main/scala/cutadapt.scala](https://github.com/ohnosequences-bundles/cutadapt/blob/master/src/main/scala/cutadapt.scala)\r\n\r\nI'm not sure whether the one for `TrimGalore` is tested because the branch is not merged into master. My questions are:\r\n- It is fine for you that I test and merge the `TrimGalore` into master and I publish the artifacts for both of them? In that case should I  make a release?\r\n- Once `TrimGalore` and `Cutadapt` are released can I add them here in the `std.scala`? if so, should I publish and make a release here as well?"},"comment":{"url":"https://api.github.com/repos/era7bio/bundles/issues/comments/158928618","html_url":"https://github.com/era7bio/bundles/issues/22#issuecomment-158928618","issue_url":"https://api.github.com/repos/era7bio/bundles/issues/22","id":158928618,"user":{"login":"laughedelic","id":766656,"avatar_url":"https://avatars.githubusercontent.com/u/766656?v=3","gravatar_id":"","url":"https://api.github.com/users/laughedelic","html_url":"https://github.com/laughedelic","followers_url":"https://api.github.com/users/laughedelic/followers","following_url":"https://api.github.com/users/laughedelic/following{/other_user}","gists_url":"https://api.github.com/users/laughedelic/gists{/gist_id}","starred_url":"https://api.github.com/users/laughedelic/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/laughedelic/subscriptions","organizations_url":"https://api.github.com/users/laughedelic/orgs","repos_url":"https://api.github.com/users/laughedelic/repos","events_url":"https://api.github.com/users/laughedelic/events{/privacy}","received_events_url":"https://api.github.com/users/laughedelic/received_events","type":"User","site_admin":false},"created_at":"2015-11-23T13:04:37Z","updated_at":"2015-11-23T13:04:37Z","body":"About Trimgalore, a good example of a similar bundle is [fastqc](https://github.com/ohnosequences-bundles/fastqc/blob/master/src/main/scala/fastqc.scala) (without the `makeExecutable` step, I guess). Take a look at the code there."}}