{"action":"created","issue":{"url":"https://api.github.com/repos/scipy/scipy/issues/5401","labels_url":"https://api.github.com/repos/scipy/scipy/issues/5401/labels{/name}","comments_url":"https://api.github.com/repos/scipy/scipy/issues/5401/comments","events_url":"https://api.github.com/repos/scipy/scipy/issues/5401/events","html_url":"https://github.com/scipy/scipy/issues/5401","id":112616186,"number":5401,"title":"ValueError: On entry to SGESDD parameter number 12 had an illegal value","user":{"login":"ppalasek","id":7462710,"avatar_url":"https://avatars.githubusercontent.com/u/7462710?v=3","gravatar_id":"","url":"https://api.github.com/users/ppalasek","html_url":"https://github.com/ppalasek","followers_url":"https://api.github.com/users/ppalasek/followers","following_url":"https://api.github.com/users/ppalasek/following{/other_user}","gists_url":"https://api.github.com/users/ppalasek/gists{/gist_id}","starred_url":"https://api.github.com/users/ppalasek/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/ppalasek/subscriptions","organizations_url":"https://api.github.com/users/ppalasek/orgs","repos_url":"https://api.github.com/users/ppalasek/repos","events_url":"https://api.github.com/users/ppalasek/events{/privacy}","received_events_url":"https://api.github.com/users/ppalasek/received_events","type":"User","site_admin":false},"labels":[{"url":"https://api.github.com/repos/scipy/scipy/labels/defect","name":"defect","color":"e11d21"},{"url":"https://api.github.com/repos/scipy/scipy/labels/scipy.linalg","name":"scipy.linalg","color":"207de5"}],"state":"open","locked":false,"assignee":null,"milestone":null,"comments":8,"created_at":"2015-10-21T15:32:29Z","updated_at":"2015-10-24T14:01:55Z","closed_at":null,"body":"Hello,\r\n\r\nI'm getting a ValueError from scipy/linalg/decomp_svd.py, line 104 when tring to run sklearn's pca.fit() function.\r\n\r\nTraceback:\r\n  File \"train.py\", line 269, in <module>\r\n    pca.fit(X)\r\n  File \"/homes/pp305/.local/lib/python2.7/site-packages/sklearn/decomposition/pca.py\", line 221, in fit\r\n    self._fit(X)\r\n  File \"/homes/pp305/.local/lib/python2.7/site-packages/sklearn/decomposition/pca.py\", line 271, in _fit\r\n    U, S, V = linalg.svd(X, full_matrices=False)\r\n  File \"/homes/pp305/.local/lib/python2.7/site-packages/scipy/linalg/decomp_svd.py\", line 104, in svd\r\n    full_matrices=full_matrices, overwrite_a=overwrite_a)\r\nValueError: On entry to SGESDD parameter number 12 had an illegal value\r\n\r\nVersions I'm using:\r\nPython 2.7.5\r\nscipy 0.16.0\r\nsklearn 0.16.1\r\nnumpy 1.9.2\r\n\r\nprint scipy.__config__.show()\r\natlas_3_10_blas_threads_info:\r\n    libraries = ['tatlas']\r\n    library_dirs = ['/usr/lib64/atlas']\r\n    define_macros = [('HAVE_CBLAS', None), ('ATLAS_INFO', '\"\\\\\"3.10.1\\\\\"\"')]\r\n    language = c\r\n    include_dirs = ['/usr/include']\r\nlapack_opt_info:\r\n    libraries = ['tatlas', 'tatlas', 'tatlas']\r\n    library_dirs = ['/usr/lib64/atlas']\r\n    define_macros = [('ATLAS_INFO', '\"\\\\\"3.10.1\\\\\"\"')]\r\n    language = f77\r\n    include_dirs = ['/usr/include']\r\nblas_opt_info:\r\n    libraries = ['tatlas']\r\n    library_dirs = ['/usr/lib64/atlas']\r\n    define_macros = [('HAVE_CBLAS', None), ('ATLAS_INFO', '\"\\\\\"3.10.1\\\\\"\"')]\r\n    language = c\r\n    include_dirs = ['/usr/include']\r\nopenblas_info:\r\n  NOT AVAILABLE\r\nopenblas_lapack_info:\r\n  NOT AVAILABLE\r\natlas_3_10_threads_info:\r\n    libraries = ['tatlas', 'tatlas', 'tatlas']\r\n    library_dirs = ['/usr/lib64/atlas']\r\n    define_macros = [('ATLAS_INFO', '\"\\\\\"3.10.1\\\\\"\"')]\r\n    language = f77\r\n    include_dirs = ['/usr/include']\r\nlapack_mkl_info:\r\n  NOT AVAILABLE\r\nblas_mkl_info:\r\n  NOT AVAILABLE\r\nmkl_info:\r\n  NOT AVAILABLE\r\nNone\r\n\r\nI found an issue like this here already:\r\nhttps://github.com/scipy/scipy/issues/3895\r\n\r\nCould you let me know how I can go about getting this to work?\r\n\r\nThank you!"},"comment":{"url":"https://api.github.com/repos/scipy/scipy/issues/comments/150815276","html_url":"https://github.com/scipy/scipy/issues/5401#issuecomment-150815276","issue_url":"https://api.github.com/repos/scipy/scipy/issues/5401","id":150815276,"user":{"login":"pv","id":35046,"avatar_url":"https://avatars.githubusercontent.com/u/35046?v=3","gravatar_id":"","url":"https://api.github.com/users/pv","html_url":"https://github.com/pv","followers_url":"https://api.github.com/users/pv/followers","following_url":"https://api.github.com/users/pv/following{/other_user}","gists_url":"https://api.github.com/users/pv/gists{/gist_id}","starred_url":"https://api.github.com/users/pv/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/pv/subscriptions","organizations_url":"https://api.github.com/users/pv/orgs","repos_url":"https://api.github.com/users/pv/repos","events_url":"https://api.github.com/users/pv/events{/privacy}","received_events_url":"https://api.github.com/users/pv/received_events","type":"User","site_admin":false},"created_at":"2015-10-24T14:01:55Z","updated_at":"2015-10-24T14:01:55Z","body":"LAPACK bug report: http://icl.cs.utk.edu/lapack-forum/viewtopic.php?f=2&t=4826\r\nWorkaround in gh-5413"}}