{"push_id":895259709,"size":4,"distinct_size":1,"ref":"refs/heads/tuning","head":"8632252ede8d3f84f83034596cd471aa778ceeb2","before":"398481065b910fa92e1d6fede6968e840c884e07","commits":[{"sha":"23b4cba556677e54be2716b15835508bd28c9173","author":{"email":"f05842d5de0ff873095d78aad30f35afd6f520e5@eva.mpg.de","name":"Udo Stenzel"},"message":"nicer output for jivebunny","distinct":false,"url":"https://api.github.com/repos/udo-stenzel/biohazard/commits/23b4cba556677e54be2716b15835508bd28c9173"},{"sha":"7cff1a1b33405dd2764c9ce276a8252535514d7e","author":{"email":"f05842d5de0ff873095d78aad30f35afd6f520e5@eva.mpg.de","name":"Udo Stenzel"},"message":"added a profiling annotation","distinct":false,"url":"https://api.github.com/repos/udo-stenzel/biohazard/commits/7cff1a1b33405dd2764c9ce276a8252535514d7e"},{"sha":"f0642bc169b61e9f981658808597dbeab93e5ff0","author":{"email":"f05842d5de0ff873095d78aad30f35afd6f520e5@eva.mpg.de","name":"Udo Stenzel"},"message":"make bam-rmdup bail at the right condition\n\nRmdup is done when a read has invalid reference coordinate.  A totally\nunmapped pair is not enough due to reads flagged as unmapped but with\ncoordinates (thanks bwa) being sorted in the middle of mapped reads\n(thanks samtools).","distinct":false,"url":"https://api.github.com/repos/udo-stenzel/biohazard/commits/f0642bc169b61e9f981658808597dbeab93e5ff0"},{"sha":"8632252ede8d3f84f83034596cd471aa778ceeb2","author":{"email":"f05842d5de0ff873095d78aad30f35afd6f520e5@eva.mpg.de","name":"Udo Stenzel"},"message":"Merge branch 'master' into tuning\n\nConflicts:\n\tbiohazard.cabal\n\ttools/bam-rmdup.hs\n\ttools/jivebunny.hs","distinct":true,"url":"https://api.github.com/repos/udo-stenzel/biohazard/commits/8632252ede8d3f84f83034596cd471aa778ceeb2"}]}