{"push_id":706664709,"size":32,"distinct_size":4,"ref":"refs/heads/parallelization","head":"476a2d02c80fa42f370558e6ab26033697a83ea0","before":"4d7b6459bdcd3975b241fd6486a3feda9908a415","commits":[{"sha":"ab4d52b7705fdfbf4e7024bec7f95d83cbdb71c2","author":{"email":"a4ac36b3d669652144323305dea2080076b86c3c@rub.de","name":"Martin Pyka"},"message":"restricted data loading to end time point specified in the animate-panel","distinct":false,"url":"https://api.github.com/repos/MartinPyka/Parametric-Anatomical-Modeling/commits/ab4d52b7705fdfbf4e7024bec7f95d83cbdb71c2"},{"sha":"596721e80b8e36cf7efd2f1f475ccdbc37af43d4","author":{"email":"a4ac36b3d669652144323305dea2080076b86c3c@rub.de","name":"Martin Pyka"},"message":"implemented restriction for data loading for start time point as well","distinct":false,"url":"https://api.github.com/repos/MartinPyka/Parametric-Anatomical-Modeling/commits/596721e80b8e36cf7efd2f1f475ccdbc37af43d4"},{"sha":"a41b0644b64963b8bea83666a90a16f13b075730","author":{"email":"a4ac36b3d669652144323305dea2080076b86c3c@rub.de","name":"Martin Pyka"},"message":"revised computation of connection length between pre-synaptic neuron and synapse","distinct":false,"url":"https://api.github.com/repos/MartinPyka/Parametric-Anatomical-Modeling/commits/a41b0644b64963b8bea83666a90a16f13b075730"},{"sha":"5468d82962767500b8d147108aff6d7c7c4015ea","author":{"email":"a4ac36b3d669652144323305dea2080076b86c3c@rub.de","name":"Martin Pyka"},"message":"add documentation about processes which can run in parallel and process which run sequential","distinct":false,"url":"https://api.github.com/repos/MartinPyka/Parametric-Anatomical-Modeling/commits/5468d82962767500b8d147108aff6d7c7c4015ea"},{"sha":"9a36d54225d9257c7c989d392c33cc4c1b8fc001","author":{"email":"06624c8f5b966bf9ce470dab8c459442d049230f@rub.de","name":"Patrick Herbers"},"message":"Pam_anim: Changed mesh to object to use for spikes on paths in the gui","distinct":false,"url":"https://api.github.com/repos/MartinPyka/Parametric-Anatomical-Modeling/commits/9a36d54225d9257c7c989d392c33cc4c1b8fc001"},{"sha":"0888988e158cbd9695877161f3c51e3c7c4d96e0","author":{"email":"06624c8f5b966bf9ce470dab8c459442d049230f@rub.de","name":"Patrick Herbers"},"message":"Merge branch 'pam_anim_feature'","distinct":false,"url":"https://api.github.com/repos/MartinPyka/Parametric-Anatomical-Modeling/commits/0888988e158cbd9695877161f3c51e3c7c4d96e0"},{"sha":"307605abde4847920b4bd7f03b355c6c8f84c4d3","author":{"email":"06624c8f5b966bf9ce470dab8c459442d049230f@rub.de","name":"Patrick Herbers"},"message":"Parallelized another part of computeConnectivity(), but no major speedup yet","distinct":true,"url":"https://api.github.com/repos/MartinPyka/Parametric-Anatomical-Modeling/commits/307605abde4847920b4bd7f03b355c6c8f84c4d3"},{"sha":"6f433100dc7d008867f2708f2fa3cc34e41183d5","author":{"email":"a4ac36b3d669652144323305dea2080076b86c3c@rub.de","name":"Martin Pyka"},"message":"added functions to measure average distance for all incoming connections of a given post-synaptic neuron","distinct":false,"url":"https://api.github.com/repos/MartinPyka/Parametric-Anatomical-Modeling/commits/6f433100dc7d008867f2708f2fa3cc34e41183d5"},{"sha":"50e688826921a33dfa1308540983b92bb78699c7","author":{"email":"a4ac36b3d669652144323305dea2080076b86c3c@rub.de","name":"Martin Pyka"},"message":"added module for pam-specific exceptions","distinct":false,"url":"https://api.github.com/repos/MartinPyka/Parametric-Anatomical-Modeling/commits/50e688826921a33dfa1308540983b92bb78699c7"},{"sha":"ba534a516ba6023ecfb7fafae373e73e7a49692d","author":{"email":"a4ac36b3d669652144323305dea2080076b86c3c@rub.de","name":"Martin Pyka"},"message":"replaced if-clauses by custom exception for mapUVto3d-mapping","distinct":false,"url":"https://api.github.com/repos/MartinPyka/Parametric-Anatomical-Modeling/commits/ba534a516ba6023ecfb7fafae373e73e7a49692d"},{"sha":"f5916d6edf9c7711ca00d3c2e4a5dd3587ad1234","author":{"email":"a4ac36b3d669652144323305dea2080076b86c3c@rub.de","name":"Martin Pyka"},"message":"debug: animates neurons also when there are more than one particle-system on one layer","distinct":false,"url":"https://api.github.com/repos/MartinPyka/Parametric-Anatomical-Modeling/commits/f5916d6edf9c7711ca00d3c2e4a5dd3587ad1234"},{"sha":"4a57c1574a99f234394259f935e9a4178e6ab87f","author":{"email":"06624c8f5b966bf9ce470dab8c459442d049230f@rub.de","name":"Patrick Herbers"},"message":"Changed deleteNeurons-function to delete objects in its group not by name","distinct":false,"url":"https://api.github.com/repos/MartinPyka/Parametric-Anatomical-Modeling/commits/4a57c1574a99f234394259f935e9a4178e6ab87f"},{"sha":"a22f4d80a66cd8b0ed4fba817961479e92dbf437","author":{"email":"06624c8f5b966bf9ce470dab8c459442d049230f@rub.de","name":"Patrick Herbers"},"message":"Merged the orientation panel into the paths panel and moved orientation tools to mesh tools","distinct":false,"url":"https://api.github.com/repos/MartinPyka/Parametric-Anatomical-Modeling/commits/a22f4d80a66cd8b0ed4fba817961479e92dbf437"},{"sha":"38205e769188387e4bd42b26efc69b3ab1a7dc21","author":{"email":"06624c8f5b966bf9ce470dab8c459442d049230f@rub.de","name":"Patrick Herbers"},"message":"Fixed Issue #3 where the timing list wasn't cleared when reading timings file, causing generated objects to append each time generate was pressed","distinct":false,"url":"https://api.github.com/repos/MartinPyka/Parametric-Anatomical-Modeling/commits/38205e769188387e4bd42b26efc69b3ab1a7dc21"},{"sha":"ed33aaddc2dcabf3962ac725262c28060846b80c","author":{"email":"06624c8f5b966bf9ce470dab8c459442d049230f@rub.de","name":"Patrick Herbers"},"message":"Added a python script in examples that automatically generates and renders an animation with given parameters","distinct":false,"url":"https://api.github.com/repos/MartinPyka/Parametric-Anatomical-Modeling/commits/ed33aaddc2dcabf3962ac725262c28060846b80c"},{"sha":"7356ad48985d7b1b3a8f3e73cc716af2305e6f6f","author":{"email":"54669547a225ff20cba8b75a4adca540eef25858@sysadmin.(none)","name":"Martin Pyka"},"message":"modified grid.py in a way that it can be tested outside python. kernel.gauss modified that it can handle large arrays of points","distinct":false,"url":"https://api.github.com/repos/MartinPyka/Parametric-Anatomical-Modeling/commits/7356ad48985d7b1b3a8f3e73cc716af2305e6f6f"},{"sha":"0711bfcbb36204e1461aa6f79ada2f971e4c3da1","author":{"email":"06624c8f5b966bf9ce470dab8c459442d049230f@rub.de","name":"Patrick Herbers"},"message":"Sped up select_random() by using numpy functions\n\nAlso temporarily added a grid_test.py for fast timing checks without having to start Blender","distinct":false,"url":"https://api.github.com/repos/MartinPyka/Parametric-Anatomical-Modeling/commits/0711bfcbb36204e1461aa6f79ada2f971e4c3da1"},{"sha":"39372212c4fc8aef8c699d0211d72524c7ca1112","author":{"email":"588303c13665acc032da78939a6a05987ab08c46@gmx.de","name":"MartinPyka"},"message":"corrected call of kernel-function to handle more than one vector, fixed probability issue in select_random, as pre_mask grid was not correctly selected","distinct":false,"url":"https://api.github.com/repos/MartinPyka/Parametric-Anatomical-Modeling/commits/39372212c4fc8aef8c699d0211d72524c7ca1112"},{"sha":"4208b0baf96755446487d802c0702ef35e32869c","author":{"email":"a4ac36b3d669652144323305dea2080076b86c3c@rub.de","name":"Martin Pyka"},"message":"changed carriage return sign","distinct":false,"url":"https://api.github.com/repos/MartinPyka/Parametric-Anatomical-Modeling/commits/4208b0baf96755446487d802c0702ef35e32869c"},{"sha":"d382c52a9d88835062f5494057a4de10bd55d96c","author":{"email":"06624c8f5b966bf9ce470dab8c459442d049230f@rub.de","name":"Patrick Herbers"},"message":"Changed the grid data structure.\n\nThe grid is now calculated as a 4-dimensional array in compute_grid(). After this the uvs in insert_postNeuron() are appended into a 2-dimensional list of lists. In select_random() the correct 2d-array is selected (works only for post right now) and based on the weights multiple cells are selected. Then a random item from the masks-list is selected for each selected cell.\nSeems to be a lot faster (2 secs for N = 5000)!","distinct":false,"url":"https://api.github.com/repos/MartinPyka/Parametric-Anatomical-Modeling/commits/d382c52a9d88835062f5494057a4de10bd55d96c"}]}