{"action":"created","issue":{"url":"https://api.github.com/repos/galaxyproject/tools-iuc/issues/390","labels_url":"https://api.github.com/repos/galaxyproject/tools-iuc/issues/390/labels{/name}","comments_url":"https://api.github.com/repos/galaxyproject/tools-iuc/issues/390/comments","events_url":"https://api.github.com/repos/galaxyproject/tools-iuc/issues/390/events","html_url":"https://github.com/galaxyproject/tools-iuc/pull/390","id":117022124,"number":390,"title":"Crisprseek dependencies","user":{"login":"nephantes","id":4869692,"avatar_url":"https://avatars.githubusercontent.com/u/4869692?v=3","gravatar_id":"","url":"https://api.github.com/users/nephantes","html_url":"https://github.com/nephantes","followers_url":"https://api.github.com/users/nephantes/followers","following_url":"https://api.github.com/users/nephantes/following{/other_user}","gists_url":"https://api.github.com/users/nephantes/gists{/gist_id}","starred_url":"https://api.github.com/users/nephantes/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/nephantes/subscriptions","organizations_url":"https://api.github.com/users/nephantes/orgs","repos_url":"https://api.github.com/users/nephantes/repos","events_url":"https://api.github.com/users/nephantes/events{/privacy}","received_events_url":"https://api.github.com/users/nephantes/received_events","type":"User","site_admin":false},"labels":[],"state":"open","locked":false,"assignee":null,"milestone":null,"comments":4,"created_at":"2015-11-15T22:09:34Z","updated_at":"2015-11-17T16:28:07Z","closed_at":null,"pull_request":{"url":"https://api.github.com/repos/galaxyproject/tools-iuc/pulls/390","html_url":"https://github.com/galaxyproject/tools-iuc/pull/390","diff_url":"https://github.com/galaxyproject/tools-iuc/pull/390.diff","patch_url":"https://github.com/galaxyproject/tools-iuc/pull/390.patch"},"body":"I generated dependencies with Bjorn's get_galaxy_tool_dependencies.py code."},"comment":{"url":"https://api.github.com/repos/galaxyproject/tools-iuc/issues/comments/157421199","html_url":"https://github.com/galaxyproject/tools-iuc/pull/390#issuecomment-157421199","issue_url":"https://api.github.com/repos/galaxyproject/tools-iuc/issues/390","id":157421199,"user":{"login":"nephantes","id":4869692,"avatar_url":"https://avatars.githubusercontent.com/u/4869692?v=3","gravatar_id":"","url":"https://api.github.com/users/nephantes","html_url":"https://github.com/nephantes","followers_url":"https://api.github.com/users/nephantes/followers","following_url":"https://api.github.com/users/nephantes/following{/other_user}","gists_url":"https://api.github.com/users/nephantes/gists{/gist_id}","starred_url":"https://api.github.com/users/nephantes/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/nephantes/subscriptions","organizations_url":"https://api.github.com/users/nephantes/orgs","repos_url":"https://api.github.com/users/nephantes/repos","events_url":"https://api.github.com/users/nephantes/events{/privacy}","received_events_url":"https://api.github.com/users/nephantes/received_events","type":"User","site_admin":false},"created_at":"2015-11-17T16:28:07Z","updated_at":"2015-11-17T16:28:07Z","body":"Thanks Bjorn,\r\nI still get this error.\r\nERROR: dependencies ‘Biostrings’, ‘BSgenome’, ‘data.table’ are not available for package ‘CRISPRseek’\r\n\r\nThere is no any trace of installing Biostrings and BSgenome in the INSTALLATION.log file. What would be wrong?\r\ndata.table wasn’t in the list. I added that one. Biostrings and BSgenome were in the package list but they weren’t installed. I thought they might require data.table. So, I added that for a new trial but I am not sure, if that’s the case for it.\r\nLet me know, after you updated testtoolshed I will try with data.table addition.\r\nThanks\r\nAlper\r\n\r\nOn Nov 17, 2015, at 10:48 AM, Björn Grüning <notifications@github.com<mailto:notifications@github.com>> wrote:\r\n\r\n\r\nDone! Sorry for taking to long.\r\n\r\n—\r\nReply to this email directly or view it on GitHub<https://github.com/galaxyproject/tools-iuc/pull/390#issuecomment-157409961>.\r\n\r\n"}}