{"action":"created","issue":{"url":"https://api.github.com/repos/smithlabcode/methpipe/issues/76","labels_url":"https://api.github.com/repos/smithlabcode/methpipe/issues/76/labels{/name}","comments_url":"https://api.github.com/repos/smithlabcode/methpipe/issues/76/comments","events_url":"https://api.github.com/repos/smithlabcode/methpipe/issues/76/events","html_url":"https://github.com/smithlabcode/methpipe/issues/76","id":107620645,"number":76,"title":"the number of lines for the methcounts output file is not consistent in the same genome","user":{"login":"acgtun","id":5848344,"avatar_url":"https://avatars.githubusercontent.com/u/5848344?v=3","gravatar_id":"","url":"https://api.github.com/users/acgtun","html_url":"https://github.com/acgtun","followers_url":"https://api.github.com/users/acgtun/followers","following_url":"https://api.github.com/users/acgtun/following{/other_user}","gists_url":"https://api.github.com/users/acgtun/gists{/gist_id}","starred_url":"https://api.github.com/users/acgtun/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/acgtun/subscriptions","organizations_url":"https://api.github.com/users/acgtun/orgs","repos_url":"https://api.github.com/users/acgtun/repos","events_url":"https://api.github.com/users/acgtun/events{/privacy}","received_events_url":"https://api.github.com/users/acgtun/received_events","type":"User","site_admin":false},"labels":[],"state":"open","locked":false,"assignee":{"login":"bdecato","id":7364304,"avatar_url":"https://avatars.githubusercontent.com/u/7364304?v=3","gravatar_id":"","url":"https://api.github.com/users/bdecato","html_url":"https://github.com/bdecato","followers_url":"https://api.github.com/users/bdecato/followers","following_url":"https://api.github.com/users/bdecato/following{/other_user}","gists_url":"https://api.github.com/users/bdecato/gists{/gist_id}","starred_url":"https://api.github.com/users/bdecato/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/bdecato/subscriptions","organizations_url":"https://api.github.com/users/bdecato/orgs","repos_url":"https://api.github.com/users/bdecato/repos","events_url":"https://api.github.com/users/bdecato/events{/privacy}","received_events_url":"https://api.github.com/users/bdecato/received_events","type":"User","site_admin":false},"milestone":null,"comments":5,"created_at":"2015-09-21T23:52:49Z","updated_at":"2015-09-22T03:51:54Z","closed_at":null,"body":"I ran the methcounts on two datasets using the same genome (hg19). The number of lines for the two output files are different. One is 1186217236, and the other is 1186291952."},"comment":{"url":"https://api.github.com/repos/smithlabcode/methpipe/issues/comments/142171734","html_url":"https://github.com/smithlabcode/methpipe/issues/76#issuecomment-142171734","issue_url":"https://api.github.com/repos/smithlabcode/methpipe/issues/76","id":142171734,"user":{"login":"acgtun","id":5848344,"avatar_url":"https://avatars.githubusercontent.com/u/5848344?v=3","gravatar_id":"","url":"https://api.github.com/users/acgtun","html_url":"https://github.com/acgtun","followers_url":"https://api.github.com/users/acgtun/followers","following_url":"https://api.github.com/users/acgtun/following{/other_user}","gists_url":"https://api.github.com/users/acgtun/gists{/gist_id}","starred_url":"https://api.github.com/users/acgtun/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/acgtun/subscriptions","organizations_url":"https://api.github.com/users/acgtun/orgs","repos_url":"https://api.github.com/users/acgtun/repos","events_url":"https://api.github.com/users/acgtun/events{/privacy}","received_events_url":"https://api.github.com/users/acgtun/received_events","type":"User","site_admin":false},"created_at":"2015-09-22T03:51:54Z","updated_at":"2015-09-22T03:51:54Z","body":"Thanks, @mengzhou .\r\n\r\nBefore the size of methcounts output file was about 28 Gb, but now it's only 4.8 Gb. Is that normal? Thanks.\r\n"}}