{"action":"created","issue":{"url":"https://api.github.com/repos/benjjneb/dada2/issues/39","labels_url":"https://api.github.com/repos/benjjneb/dada2/issues/39/labels{/name}","comments_url":"https://api.github.com/repos/benjjneb/dada2/issues/39/comments","events_url":"https://api.github.com/repos/benjjneb/dada2/issues/39/events","html_url":"https://github.com/benjjneb/dada2/issues/39","id":108357469,"number":39,"title":"package ‘missing_package_1’ is not available (for R version 3.2.2) ","user":{"login":"IsabelFE","id":7309296,"avatar_url":"https://avatars.githubusercontent.com/u/7309296?v=3","gravatar_id":"","url":"https://api.github.com/users/IsabelFE","html_url":"https://github.com/IsabelFE","followers_url":"https://api.github.com/users/IsabelFE/followers","following_url":"https://api.github.com/users/IsabelFE/following{/other_user}","gists_url":"https://api.github.com/users/IsabelFE/gists{/gist_id}","starred_url":"https://api.github.com/users/IsabelFE/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/IsabelFE/subscriptions","organizations_url":"https://api.github.com/users/IsabelFE/orgs","repos_url":"https://api.github.com/users/IsabelFE/repos","events_url":"https://api.github.com/users/IsabelFE/events{/privacy}","received_events_url":"https://api.github.com/users/IsabelFE/received_events","type":"User","site_admin":false},"labels":[],"state":"open","locked":false,"assignee":null,"milestone":null,"comments":21,"created_at":"2015-09-25T16:20:54Z","updated_at":"2015-09-25T17:51:17Z","closed_at":null,"body":"Hello,\r\n\r\nmissing_package_1 and 2 are not available for the new R version. How can I fix this? (I am really new to R)\r\n\r\nThanks a lot "},"comment":{"url":"https://api.github.com/repos/benjjneb/dada2/issues/comments/143302337","html_url":"https://github.com/benjjneb/dada2/issues/39#issuecomment-143302337","issue_url":"https://api.github.com/repos/benjjneb/dada2/issues/39","id":143302337,"user":{"login":"benjjneb","id":5797204,"avatar_url":"https://avatars.githubusercontent.com/u/5797204?v=3","gravatar_id":"","url":"https://api.github.com/users/benjjneb","html_url":"https://github.com/benjjneb","followers_url":"https://api.github.com/users/benjjneb/followers","following_url":"https://api.github.com/users/benjjneb/following{/other_user}","gists_url":"https://api.github.com/users/benjjneb/gists{/gist_id}","starred_url":"https://api.github.com/users/benjjneb/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/benjjneb/subscriptions","organizations_url":"https://api.github.com/users/benjjneb/orgs","repos_url":"https://api.github.com/users/benjjneb/repos","events_url":"https://api.github.com/users/benjjneb/events{/privacy}","received_events_url":"https://api.github.com/users/benjjneb/received_events","type":"User","site_admin":false},"created_at":"2015-09-25T17:51:17Z","updated_at":"2015-09-25T17:51:17Z","body":"OK, let's try from the ground up on the laptop. We'll install the base\nBioconductor packages first, then do the dada2 install:\n\nsource(\"http://bioconductor.org/biocLite.R\")\nbiocLite()\ninstall.packages(\"devtools\")\nlibrary(\"devtools\")\ndevtools::install_github(\"benjjneb/dada2\")\nlibrary(\"dada2\")\n\nWhen running the biocLite() command it will probably prompt you about\ninstalling some packages, just go ahead and install them all.\n\n\nOn Fri, Sep 25, 2015 at 10:17 AM, IsabelFE <notifications@github.com> wrote:\n\n> Let's see. I am using two computers (both mac):\n> Desktop: R studio is crashing now all the time. Again with\n> library(\"devtools\")\n> Laptop:\n> devtools::install_github(\"benjjneb/dada2\")\n> Downloading GitHub repo benjjneb/dada2@master\n> Installing dada2\n> Error in loadNamespace(name) : there is no package called 'BiocInstaller\n>\n> —\n> Reply to this email directly or view it on GitHub\n> <https://github.com/benjjneb/dada2/issues/39#issuecomment-143291715>.\n>\n"}}