{"action":"created","issue":{"url":"https://api.github.com/repos/DCGenomics/NCBI_August_Hackathon_Push_Button_Genomics_Solution/issues/8","labels_url":"https://api.github.com/repos/DCGenomics/NCBI_August_Hackathon_Push_Button_Genomics_Solution/issues/8/labels{/name}","comments_url":"https://api.github.com/repos/DCGenomics/NCBI_August_Hackathon_Push_Button_Genomics_Solution/issues/8/comments","events_url":"https://api.github.com/repos/DCGenomics/NCBI_August_Hackathon_Push_Button_Genomics_Solution/issues/8/events","html_url":"https://github.com/DCGenomics/NCBI_August_Hackathon_Push_Button_Genomics_Solution/issues/8","id":98980867,"number":8,"title":"Write script to filter VCF","user":{"login":"eweitz","id":1334561,"avatar_url":"https://avatars.githubusercontent.com/u/1334561?v=3","gravatar_id":"","url":"https://api.github.com/users/eweitz","html_url":"https://github.com/eweitz","followers_url":"https://api.github.com/users/eweitz/followers","following_url":"https://api.github.com/users/eweitz/following{/other_user}","gists_url":"https://api.github.com/users/eweitz/gists{/gist_id}","starred_url":"https://api.github.com/users/eweitz/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/eweitz/subscriptions","organizations_url":"https://api.github.com/users/eweitz/orgs","repos_url":"https://api.github.com/users/eweitz/repos","events_url":"https://api.github.com/users/eweitz/events{/privacy}","received_events_url":"https://api.github.com/users/eweitz/received_events","type":"User","site_admin":false},"labels":[],"state":"open","locked":false,"assignee":{"login":"vlaufer","id":4931784,"avatar_url":"https://avatars.githubusercontent.com/u/4931784?v=3","gravatar_id":"","url":"https://api.github.com/users/vlaufer","html_url":"https://github.com/vlaufer","followers_url":"https://api.github.com/users/vlaufer/followers","following_url":"https://api.github.com/users/vlaufer/following{/other_user}","gists_url":"https://api.github.com/users/vlaufer/gists{/gist_id}","starred_url":"https://api.github.com/users/vlaufer/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/vlaufer/subscriptions","organizations_url":"https://api.github.com/users/vlaufer/orgs","repos_url":"https://api.github.com/users/vlaufer/repos","events_url":"https://api.github.com/users/vlaufer/events{/privacy}","received_events_url":"https://api.github.com/users/vlaufer/received_events","type":"User","site_admin":false},"milestone":null,"comments":13,"created_at":"2015-08-04T14:17:24Z","updated_at":"2015-08-11T21:17:10Z","closed_at":null,"body":"Write a script to apply the user's filter selections to an annotated VCF.  \r\n\r\nInput parameters: \r\n- *Filters*: command-line arguments describing the user's filter selections, e.g. \"filters=clinsig:pathogenic+molcons:missense\"\r\n- *Path to annotated VCF*. an annotated VCF file where each row is a variant, and the INFO column has data on which filters the variant matches (e.g. clinsig=pathogenic;molcons=missense).  \r\n\r\nOutput:\r\n- *Filtered VCF*: A VCF file in which the variants are _only_ those matching the user's filter selections.  For example, if the user had a filter selection \"clinsig:pathogenic\", the output VCF would not include any variants with \"clinsig:benign\".  \r\n\r\n@nicovbing, this is the issue we discussed. \r\n"},"comment":{"url":"https://api.github.com/repos/DCGenomics/NCBI_August_Hackathon_Push_Button_Genomics_Solution/issues/comments/130080233","html_url":"https://github.com/DCGenomics/NCBI_August_Hackathon_Push_Button_Genomics_Solution/issues/8#issuecomment-130080233","issue_url":"https://api.github.com/repos/DCGenomics/NCBI_August_Hackathon_Push_Button_Genomics_Solution/issues/8","id":130080233,"user":{"login":"vlaufer","id":4931784,"avatar_url":"https://avatars.githubusercontent.com/u/4931784?v=3","gravatar_id":"","url":"https://api.github.com/users/vlaufer","html_url":"https://github.com/vlaufer","followers_url":"https://api.github.com/users/vlaufer/followers","following_url":"https://api.github.com/users/vlaufer/following{/other_user}","gists_url":"https://api.github.com/users/vlaufer/gists{/gist_id}","starred_url":"https://api.github.com/users/vlaufer/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/vlaufer/subscriptions","organizations_url":"https://api.github.com/users/vlaufer/orgs","repos_url":"https://api.github.com/users/vlaufer/repos","events_url":"https://api.github.com/users/vlaufer/events{/privacy}","received_events_url":"https://api.github.com/users/vlaufer/received_events","type":"User","site_admin":false},"created_at":"2015-08-11T21:17:10Z","updated_at":"2015-08-11T21:17:10Z","body":"Understood. If I can't get to it by then, I'll start on other things.\r\n"}}