{"action":"created","issue":{"url":"https://api.github.com/repos/arq5x/gemini/issues/393","labels_url":"https://api.github.com/repos/arq5x/gemini/issues/393/labels{/name}","comments_url":"https://api.github.com/repos/arq5x/gemini/issues/393/comments","events_url":"https://api.github.com/repos/arq5x/gemini/issues/393/events","html_url":"https://github.com/arq5x/gemini/issues/393","id":62429710,"number":393,"title":"create docker container with all deps and data pre-installed","user":{"login":"brentp","id":1739,"avatar_url":"https://avatars.githubusercontent.com/u/1739?v=3","gravatar_id":"","url":"https://api.github.com/users/brentp","html_url":"https://github.com/brentp","followers_url":"https://api.github.com/users/brentp/followers","following_url":"https://api.github.com/users/brentp/following{/other_user}","gists_url":"https://api.github.com/users/brentp/gists{/gist_id}","starred_url":"https://api.github.com/users/brentp/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/brentp/subscriptions","organizations_url":"https://api.github.com/users/brentp/orgs","repos_url":"https://api.github.com/users/brentp/repos","events_url":"https://api.github.com/users/brentp/events{/privacy}","received_events_url":"https://api.github.com/users/brentp/received_events","type":"User","site_admin":false},"labels":[],"state":"open","locked":false,"assignee":null,"milestone":null,"comments":22,"created_at":"2015-03-17T15:29:14Z","updated_at":"2015-03-27T11:42:24Z","closed_at":null,"body":"To ease use, it would be nice to have a docker container. Things to address.\r\n\r\n- [ ] instructions for installing docker and loading VCF from local file system\r\n- [ ] can docker work without sudo? (see: http://askubuntu.com/questions/477551/how-can-i-use-docker-without-sudo ... and problems: https://github.com/subuser-security/subuser/issues/131, might be resolved in recent version: https://github.com/docker/docker/issues/3124)\r\n- [ ] ~~will dockerhub host a large image?~~ [NO]\r\n- [ ] create a separate docker data volume (as per @bgruening 's suggestion below).\r\n\r\nthis would also make a portable and shareable analysis environment. \r\n\r\n@chapmanb @roryk I know you have thought about these, any further things to consider?"},"comment":{"url":"https://api.github.com/repos/arq5x/gemini/issues/comments/86908320","html_url":"https://github.com/arq5x/gemini/issues/393#issuecomment-86908320","issue_url":"https://api.github.com/repos/arq5x/gemini/issues/393","id":86908320,"user":{"login":"dgaston","id":1605762,"avatar_url":"https://avatars.githubusercontent.com/u/1605762?v=3","gravatar_id":"","url":"https://api.github.com/users/dgaston","html_url":"https://github.com/dgaston","followers_url":"https://api.github.com/users/dgaston/followers","following_url":"https://api.github.com/users/dgaston/following{/other_user}","gists_url":"https://api.github.com/users/dgaston/gists{/gist_id}","starred_url":"https://api.github.com/users/dgaston/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/dgaston/subscriptions","organizations_url":"https://api.github.com/users/dgaston/orgs","repos_url":"https://api.github.com/users/dgaston/repos","events_url":"https://api.github.com/users/dgaston/events{/privacy}","received_events_url":"https://api.github.com/users/dgaston/received_events","type":"User","site_admin":false},"created_at":"2015-03-27T11:42:24Z","updated_at":"2015-03-27T11:42:24Z","body":"I used Ubuntu 14.04 as my base, but you could definitely use a smaller one I'm sure. There are some tweaks that hopefully can be made th flatten the image a bit more."}}