{"action":"created","issue":{"url":"https://api.github.com/repos/biocore/American-Gut/issues/145","labels_url":"https://api.github.com/repos/biocore/American-Gut/issues/145/labels{/name}","comments_url":"https://api.github.com/repos/biocore/American-Gut/issues/145/comments","events_url":"https://api.github.com/repos/biocore/American-Gut/issues/145/events","html_url":"https://github.com/biocore/American-Gut/issues/145","id":67832808,"number":145,"title":"Cannot import biom file in R","user":{"login":"arcys","id":11904252,"avatar_url":"https://avatars.githubusercontent.com/u/11904252?v=3","gravatar_id":"","url":"https://api.github.com/users/arcys","html_url":"https://github.com/arcys","followers_url":"https://api.github.com/users/arcys/followers","following_url":"https://api.github.com/users/arcys/following{/other_user}","gists_url":"https://api.github.com/users/arcys/gists{/gist_id}","starred_url":"https://api.github.com/users/arcys/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/arcys/subscriptions","organizations_url":"https://api.github.com/users/arcys/orgs","repos_url":"https://api.github.com/users/arcys/repos","events_url":"https://api.github.com/users/arcys/events{/privacy}","received_events_url":"https://api.github.com/users/arcys/received_events","type":"User","site_admin":false},"labels":[],"state":"closed","locked":false,"assignee":null,"milestone":null,"comments":7,"created_at":"2015-04-11T21:06:01Z","updated_at":"2015-10-22T18:17:24Z","closed_at":"2015-10-22T18:17:24Z","body":"I am new to biome file and try to download the biom here for testing. I have click and save the raw file into my hardisk and tried to open it in R using phyloseq and biom package but it returns : \r\n\r\n\"Error in fromJSON(content, handler, default.size, depth, allowComments,  : \r\n  invalid JSON input\"\r\n\r\nI have copied and paste an example url (https://github.com/biocore/American-Gut/blob/master/data/HMP/HMPv35_100nt.biom) to some jason validator on web but it return a error.\r\n\r\nWould you instruct on some materials that I can start with working biom files from here? Thank you so much!\r\n\r\nRegards,\r\nCarol"},"comment":{"url":"https://api.github.com/repos/biocore/American-Gut/issues/comments/150311030","html_url":"https://github.com/biocore/American-Gut/issues/145#issuecomment-150311030","issue_url":"https://api.github.com/repos/biocore/American-Gut/issues/145","id":150311030,"user":{"login":"wasade","id":474290,"avatar_url":"https://avatars.githubusercontent.com/u/474290?v=3","gravatar_id":"","url":"https://api.github.com/users/wasade","html_url":"https://github.com/wasade","followers_url":"https://api.github.com/users/wasade/followers","following_url":"https://api.github.com/users/wasade/following{/other_user}","gists_url":"https://api.github.com/users/wasade/gists{/gist_id}","starred_url":"https://api.github.com/users/wasade/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/wasade/subscriptions","organizations_url":"https://api.github.com/users/wasade/orgs","repos_url":"https://api.github.com/users/wasade/repos","events_url":"https://api.github.com/users/wasade/events{/privacy}","received_events_url":"https://api.github.com/users/wasade/received_events","type":"User","site_admin":false},"created_at":"2015-10-22T18:17:24Z","updated_at":"2015-10-22T18:17:24Z","body":"Thanks!"}}