{"action":"closed","issue":{"url":"https://api.github.com/repos/mdtraj/mdtraj/issues/777","labels_url":"https://api.github.com/repos/mdtraj/mdtraj/issues/777/labels{/name}","comments_url":"https://api.github.com/repos/mdtraj/mdtraj/issues/777/comments","events_url":"https://api.github.com/repos/mdtraj/mdtraj/issues/777/events","html_url":"https://github.com/mdtraj/mdtraj/issues/777","id":63859806,"number":777,"title":"mol2 bond status bits not supported","user":{"login":"pfrstg","id":6333018,"avatar_url":"https://avatars.githubusercontent.com/u/6333018?v=3","gravatar_id":"","url":"https://api.github.com/users/pfrstg","html_url":"https://github.com/pfrstg","followers_url":"https://api.github.com/users/pfrstg/followers","following_url":"https://api.github.com/users/pfrstg/following{/other_user}","gists_url":"https://api.github.com/users/pfrstg/gists{/gist_id}","starred_url":"https://api.github.com/users/pfrstg/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/pfrstg/subscriptions","organizations_url":"https://api.github.com/users/pfrstg/orgs","repos_url":"https://api.github.com/users/pfrstg/repos","events_url":"https://api.github.com/users/pfrstg/events{/privacy}","received_events_url":"https://api.github.com/users/pfrstg/received_events","type":"User","site_admin":false},"labels":[],"state":"closed","locked":false,"assignee":null,"milestone":null,"comments":16,"created_at":"2015-03-23T23:50:04Z","updated_at":"2015-03-31T21:40:51Z","closed_at":"2015-03-31T21:40:51Z","body":"I can't submit the original file that created this problem, but I create a problematic file.\r\n\r\nmol2 bond records have optional status bits associated with a bond\r\nSee page 13 of \r\nhttp://www.tripos.com/data/support/mol2.pdf\r\n\r\nIn my case, this showed up as\r\nbond line like:\r\n      3    2   15 am   BACKBONE|DICT|INTERRES\r\n \r\nI looked a little at fixing this, but because this uses pandas read_table, it's not trivial. I could filter out the status bits with some simple regexping but I wanted to discuss here what the best way to fix this would be."}}