{"action":"created","issue":{"url":"https://api.github.com/repos/bioperl/bioperl.github.io/issues/1","labels_url":"https://api.github.com/repos/bioperl/bioperl.github.io/issues/1/labels{/name}","comments_url":"https://api.github.com/repos/bioperl/bioperl.github.io/issues/1/comments","events_url":"https://api.github.com/repos/bioperl/bioperl.github.io/issues/1/events","html_url":"https://github.com/bioperl/bioperl.github.io/issues/1","id":119534889,"number":1,"title":"Updates to HOWTOs","user":{"login":"cjfields","id":49265,"avatar_url":"https://avatars.githubusercontent.com/u/49265?v=3","gravatar_id":"","url":"https://api.github.com/users/cjfields","html_url":"https://github.com/cjfields","followers_url":"https://api.github.com/users/cjfields/followers","following_url":"https://api.github.com/users/cjfields/following{/other_user}","gists_url":"https://api.github.com/users/cjfields/gists{/gist_id}","starred_url":"https://api.github.com/users/cjfields/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/cjfields/subscriptions","organizations_url":"https://api.github.com/users/cjfields/orgs","repos_url":"https://api.github.com/users/cjfields/repos","events_url":"https://api.github.com/users/cjfields/events{/privacy}","received_events_url":"https://api.github.com/users/cjfields/received_events","type":"User","site_admin":false},"labels":[],"state":"open","locked":false,"assignee":null,"milestone":null,"comments":8,"created_at":"2015-11-30T17:00:41Z","updated_at":"2015-12-01T05:33:43Z","closed_at":null,"body":"Sign up here for HOWTO doc updates.  So far:\r\n\r\n@bosborne : Beginners, SearchIO, SeqIO\r\n@pcantalupo : BlastPlus\r\n@majensen : Tiling, Utilities WebServices,Restriction_Enzyme_Analysis, Short-read_assemblies_with_BWA, Short-read_assemblies_with_maq,Nexml\r\n@cjfields : EUtilities Cookbook, Feature-Annotation, AlignIO_and_SimpleAlign, Bioperl_Objects\r\n\r\nRemaining: \r\n\r\nGetting_Genomic_Sequences\r\nGlyphs\r\nGraphics\r\nLocal_Databases\r\nOBDA\r\nOBDA_Flat_databases\r\nPAML\r\nPhyloXML\r\nPhylogeneticAnalysisPipeline\r\nPopGen\r\nSimple_web_analysis\r\nSubmitPatch\r\nTrees\r\nWriting_BioPerl_Tests\r\n"},"comment":{"url":"https://api.github.com/repos/bioperl/bioperl.github.io/issues/comments/160858319","html_url":"https://github.com/bioperl/bioperl.github.io/issues/1#issuecomment-160858319","issue_url":"https://api.github.com/repos/bioperl/bioperl.github.io/issues/1","id":160858319,"user":{"login":"pcantalupo","id":310962,"avatar_url":"https://avatars.githubusercontent.com/u/310962?v=3","gravatar_id":"","url":"https://api.github.com/users/pcantalupo","html_url":"https://github.com/pcantalupo","followers_url":"https://api.github.com/users/pcantalupo/followers","following_url":"https://api.github.com/users/pcantalupo/following{/other_user}","gists_url":"https://api.github.com/users/pcantalupo/gists{/gist_id}","starred_url":"https://api.github.com/users/pcantalupo/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/pcantalupo/subscriptions","organizations_url":"https://api.github.com/users/pcantalupo/orgs","repos_url":"https://api.github.com/users/pcantalupo/repos","events_url":"https://api.github.com/users/pcantalupo/events{/privacy}","received_events_url":"https://api.github.com/users/pcantalupo/received_events","type":"User","site_admin":false},"created_at":"2015-12-01T05:33:43Z","updated_at":"2015-12-01T05:33:43Z","body":"Some of the HOWTOs have irritating non-breaking spaces in the code which does not look good when converted to html. I used the following command to convert them to regular spaces in BlastPlus.md:\r\n```\r\nperl -pe 's/\\xc2\\xa0/ /g' BlastPlus.md\r\n```\r\nHopefully this will help somebody else.\r\n "}}