{"action":"created","issue":{"url":"https://api.github.com/repos/ohnosequences/metapasta/issues/73","labels_url":"https://api.github.com/repos/ohnosequences/metapasta/issues/73/labels{/name}","comments_url":"https://api.github.com/repos/ohnosequences/metapasta/issues/73/comments","events_url":"https://api.github.com/repos/ohnosequences/metapasta/issues/73/events","html_url":"https://github.com/ohnosequences/metapasta/issues/73","id":79022284,"number":73,"title":"algorithm.md","user":{"login":"rtobes","id":833404,"avatar_url":"https://avatars.githubusercontent.com/u/833404?v=3","gravatar_id":"","url":"https://api.github.com/users/rtobes","html_url":"https://github.com/rtobes","followers_url":"https://api.github.com/users/rtobes/followers","following_url":"https://api.github.com/users/rtobes/following{/other_user}","gists_url":"https://api.github.com/users/rtobes/gists{/gist_id}","starred_url":"https://api.github.com/users/rtobes/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/rtobes/subscriptions","organizations_url":"https://api.github.com/users/rtobes/orgs","repos_url":"https://api.github.com/users/rtobes/repos","events_url":"https://api.github.com/users/rtobes/events{/privacy}","received_events_url":"https://api.github.com/users/rtobes/received_events","type":"User","site_admin":false},"labels":[],"state":"open","locked":false,"assignee":null,"milestone":null,"comments":2,"created_at":"2015-05-21T14:34:47Z","updated_at":"2015-05-21T16:41:55Z","closed_at":null,"body":"Kim,\r\nhttps://github.com/ohnosequences/metapasta/blob/master/doc/algorithm.md \r\n\r\nPlease review and correct this part:\r\n\r\n\r\n>Step description\r\n\r\n>Grouping all hits by read id\r\n>Retrieving taxa identifiers from reference identifiers in 16S. If no taxon corresponded to the reference from 16S found, the read assigned to TaxIdAssignment\r\n>Running LCA and BBH assigning algorithms (see bellow) for each read id and list hits together with taxa\r\n>Final counts: Each reads that have been assigned to a taxon contributes (value 1) to direct frequency of that taxon in the sample, and accumulative frequency of all ancestors of that taxon."},"comment":{"url":"https://api.github.com/repos/ohnosequences/metapasta/issues/comments/104348694","html_url":"https://github.com/ohnosequences/metapasta/issues/73#issuecomment-104348694","issue_url":"https://api.github.com/repos/ohnosequences/metapasta/issues/73","id":104348694,"user":{"login":"rtobes","id":833404,"avatar_url":"https://avatars.githubusercontent.com/u/833404?v=3","gravatar_id":"","url":"https://api.github.com/users/rtobes","html_url":"https://github.com/rtobes","followers_url":"https://api.github.com/users/rtobes/followers","following_url":"https://api.github.com/users/rtobes/following{/other_user}","gists_url":"https://api.github.com/users/rtobes/gists{/gist_id}","starred_url":"https://api.github.com/users/rtobes/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/rtobes/subscriptions","organizations_url":"https://api.github.com/users/rtobes/orgs","repos_url":"https://api.github.com/users/rtobes/repos","events_url":"https://api.github.com/users/rtobes/events{/privacy}","received_events_url":"https://api.github.com/users/rtobes/received_events","type":"User","site_admin":false},"created_at":"2015-05-21T16:41:55Z","updated_at":"2015-05-21T16:41:55Z","body":"I don´t understand point 2. \r\n\r\n"}}