{"action":"opened","number":2,"pull_request":{"url":"https://api.github.com/repos/ncbi/ncbi-vdb/pulls/2","id":32262348,"html_url":"https://github.com/ncbi/ncbi-vdb/pull/2","diff_url":"https://github.com/ncbi/ncbi-vdb/pull/2.diff","patch_url":"https://github.com/ncbi/ncbi-vdb/pull/2.patch","issue_url":"https://api.github.com/repos/ncbi/ncbi-vdb/issues/2","number":2,"state":"open","locked":false,"title":"replace subst with patsubst to fix ncbi/ncbi-vdb#1","user":{"login":"mdshw5","id":819554,"avatar_url":"https://avatars.githubusercontent.com/u/819554?v=3","gravatar_id":"","url":"https://api.github.com/users/mdshw5","html_url":"https://github.com/mdshw5","followers_url":"https://api.github.com/users/mdshw5/followers","following_url":"https://api.github.com/users/mdshw5/following{/other_user}","gists_url":"https://api.github.com/users/mdshw5/gists{/gist_id}","starred_url":"https://api.github.com/users/mdshw5/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/mdshw5/subscriptions","organizations_url":"https://api.github.com/users/mdshw5/orgs","repos_url":"https://api.github.com/users/mdshw5/repos","events_url":"https://api.github.com/users/mdshw5/events{/privacy}","received_events_url":"https://api.github.com/users/mdshw5/received_events","type":"User","site_admin":false},"body":"Using more stringent `patsubst` instead of `subst` fixes my issue (#1), and should probably be safer, since the pattern matching is to replace suffixes for version numbers. \r\n\r\n```text\r\n...\r\nmake[1]: Leaving directory `/mnt/galaxy/tools/sra_toolkit/2.4.5/matt-shirley/ncbi_sra_toolkit/ef71f5982df5/src/ncbi-vdb/libs'\r\nNOTE - internal library libkff cannot be built: It requires 'libmagic' and its development headers.\r\nNOTE - library libkdf5 cannot be built: It requires 'libhdf5' and its development headers.\r\ninstalling 'libncbi-vdb.a.2.4.5'... success\r\ninstalling 'libncbi-vdb.so.2.4.5'... success\r\ninstalling 'libncbi-wvdb.a.2.4.5'... success\r\ninstalling 'libncbi-wvdb.so.2.4.5'... success\r\ninstalling 'libncbi-ngs-c++.a.2.4.5'... success\r\nInstalling includes to /mnt/galaxy/tools/sra_toolkit/2.4.5/matt-shirley/ncbi_sra_toolkit/ef71f5982df5/include\r\nInstalling configuration files to /mnt/galaxy/tools/sra_toolkit/2.4.5/matt-shirley/ncbi_sra_toolkit/ef71f5982df5/lib64/ncbi/\r\nPlease add /mnt/galaxy/tools/sra_toolkit/2.4.5/matt-shirley/ncbi_sra_toolkit/ef71f5982df5/lib64 to your LD_LIBRARY_PATH, e.g.:\r\n      export LD_LIBRARY_PATH=/mnt/galaxy/tools/sra_toolkit/2.4.5/matt-shirley/ncbi_sra_toolkit/ef71f5982df5/lib64:$LD_LIBRARY_PATH\r\nUse /mnt/galaxy/tools/sra_toolkit/2.4.5/matt-shirley/ncbi_sra_toolkit/ef71f5982df5/lib64 in your link commands, e.g.:\r\n      export NCBI_VDB_LIBDIR=/mnt/galaxy/tools/sra_toolkit/2.4.5/matt-shirley/ncbi_sra_toolkit/ef71f5982df5/lib64\r\n      ld -L$NCBI_VDB_LIBDIR -lncbi-vdb ...\r\ngalaxy@ip-10-63-79-236:/mnt/galaxy/tools/sra_toolkit/2.4.5/matt-shirley/ncbi_sra_toolkit/ef71f5982df5/src/ncbi-vdb$ cd ..\r\ngalaxy@ip-10-63-79-236:/mnt/galaxy/tools/sra_toolkit/2.4.5/matt-shirley/ncbi_sra_toolkit/ef71f5982df5/src$ cd ..\r\ngalaxy@ip-10-63-79-236:/mnt/galaxy/tools/sra_toolkit/2.4.5/matt-shirley/ncbi_sra_toolkit/ef71f5982df5$ ls\r\nbuild  include  INSTALLATION.log  lib64  src\r\ngalaxy@ip-10-63-79-236:/mnt/galaxy/tools/sra_toolkit/2.4.5/matt-shirley/ncbi_sra_toolkit/ef71f5982df5$ cd lib64/\r\ngalaxy@ip-10-63-79-236:/mnt/galaxy/tools/sra_toolkit/2.4.5/matt-shirley/ncbi_sra_toolkit/ef71f5982df5/lib64$ ls\r\nlibncbi-ngs-c++.a         libncbi-vdb.a        libncbi-vdb.so.2      libncbi-wvdb.a.2      libncbi-wvdb.so.2.4.5\r\nlibncbi-ngs-c++.a.2       libncbi-vdb.a.2      libncbi-vdb.so.2.4.5  libncbi-wvdb.a.2.4.5  libncbi-wvdb-static.a\r\nlibncbi-ngs-c++.a.2.4.5   libncbi-vdb.a.2.4.5  libncbi-vdb-static.a  libncbi-wvdb.so       ncbi\r\nlibncbi-ngs-c++-static.a  libncbi-vdb.so       libncbi-wvdb.a        libncbi-wvdb.so.2\r\n...\r\n```","created_at":"2015-03-30T20:10:26Z","updated_at":"2015-03-30T20:10:26Z","closed_at":null,"merged_at":null,"merge_commit_sha":null,"assignee":null,"milestone":null,"commits_url":"https://api.github.com/repos/ncbi/ncbi-vdb/pulls/2/commits","review_comments_url":"https://api.github.com/repos/ncbi/ncbi-vdb/pulls/2/comments","review_comment_url":"https://api.github.com/repos/ncbi/ncbi-vdb/pulls/comments{/number}","comments_url":"https://api.github.com/repos/ncbi/ncbi-vdb/issues/2/comments","statuses_url":"https://api.github.com/repos/ncbi/ncbi-vdb/statuses/4dbba5c6a809d17ca09f127bf22459ec04c3b506","head":{"label":"mdshw5:master","ref":"master","sha":"4dbba5c6a809d17ca09f127bf22459ec04c3b506","user":{"login":"mdshw5","id":819554,"avatar_url":"https://avatars.githubusercontent.com/u/819554?v=3","gravatar_id":"","url":"https://api.github.com/users/mdshw5","html_url":"https://github.com/mdshw5","followers_url":"https://api.github.com/users/mdshw5/followers","following_url":"https://api.github.com/users/mdshw5/following{/other_user}","gists_url":"https://api.github.com/users/mdshw5/gists{/gist_id}","starred_url":"https://api.github.com/users/mdshw5/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/mdshw5/subscriptions","organizations_url":"https://api.github.com/users/mdshw5/orgs","repos_url":"https://api.github.com/users/mdshw5/repos","events_url":"https://api.github.com/users/mdshw5/events{/privacy}","received_events_url":"https://api.github.com/users/mdshw5/received_events","type":"User","site_admin":false},"repo":{"id":33144418,"name":"ncbi-vdb","full_name":"mdshw5/ncbi-vdb","owner":{"login":"mdshw5","id":819554,"avatar_url":"https://avatars.githubusercontent.com/u/819554?v=3","gravatar_id":"","url":"https://api.github.com/users/mdshw5","html_url":"https://github.com/mdshw5","followers_url":"https://api.github.com/users/mdshw5/followers","following_url":"https://api.github.com/users/mdshw5/following{/other_user}","gists_url":"https://api.github.com/users/mdshw5/gists{/gist_id}","starred_url":"https://api.github.com/users/mdshw5/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/mdshw5/subscriptions","organizations_url":"https://api.github.com/users/mdshw5/orgs","repos_url":"https://api.github.com/users/mdshw5/repos","events_url":"https://api.github.com/users/mdshw5/events{/privacy}","received_events_url":"https://api.github.com/users/mdshw5/received_events","type":"User","site_admin":false},"private":false,"html_url":"https://github.com/mdshw5/ncbi-vdb","description":"ncbi-vdb","fork":true,"url":"https://api.github.com/repos/mdshw5/ncbi-vdb","forks_url":"https://api.github.com/repos/mdshw5/ncbi-vdb/forks","keys_url":"https://api.github.com/repos/mdshw5/ncbi-vdb/keys{/key_id}","collaborators_url":"https://api.github.com/repos/mdshw5/ncbi-vdb/collaborators{/collaborator}","teams_url":"https://api.github.com/repos/mdshw5/ncbi-vdb/teams","hooks_url":"https://api.github.com/repos/mdshw5/ncbi-vdb/hooks","issue_events_url":"https://api.github.com/repos/mdshw5/ncbi-vdb/issues/events{/number}","events_url":"https://api.github.com/repos/mdshw5/ncbi-vdb/events","assignees_url":"https://api.github.com/repos/mdshw5/ncbi-vdb/assignees{/user}","branches_url":"https://api.github.com/repos/mdshw5/ncbi-vdb/branches{/branch}","tags_url":"https://api.github.com/repos/mdshw5/ncbi-vdb/tags","blobs_url":"https://api.github.com/repos/mdshw5/ncbi-vdb/git/blobs{/sha}","git_tags_url":"https://api.github.com/repos/mdshw5/ncbi-vdb/git/tags{/sha}","git_refs_url":"https://api.github.com/repos/mdshw5/ncbi-vdb/git/refs{/sha}","trees_url":"https://api.github.com/repos/mdshw5/ncbi-vdb/git/trees{/sha}","statuses_url":"https://api.github.com/repos/mdshw5/ncbi-vdb/statuses/{sha}","languages_url":"https://api.github.com/repos/mdshw5/ncbi-vdb/languages","stargazers_url":"https://api.github.com/repos/mdshw5/ncbi-vdb/stargazers","contributors_url":"https://api.github.com/repos/mdshw5/ncbi-vdb/contributors","subscribers_url":"https://api.github.com/repos/mdshw5/ncbi-vdb/subscribers","subscription_url":"https://api.github.com/repos/mdshw5/ncbi-vdb/subscription","commits_url":"https://api.github.com/repos/mdshw5/ncbi-vdb/commits{/sha}","git_commits_url":"https://api.github.com/repos/mdshw5/ncbi-vdb/git/commits{/sha}","comments_url":"https://api.github.com/repos/mdshw5/ncbi-vdb/comments{/number}","issue_comment_url":"https://api.github.com/repos/mdshw5/ncbi-vdb/issues/comments{/number}","contents_url":"https://api.github.com/repos/mdshw5/ncbi-vdb/contents/{+path}","compare_url":"https://api.github.com/repos/mdshw5/ncbi-vdb/compare/{base}...{head}","merges_url":"https://api.github.com/repos/mdshw5/ncbi-vdb/merges","archive_url":"https://api.github.com/repos/mdshw5/ncbi-vdb/{archive_format}{/ref}","downloads_url":"https://api.github.com/repos/mdshw5/ncbi-vdb/downloads","issues_url":"https://api.github.com/repos/mdshw5/ncbi-vdb/issues{/number}","pulls_url":"https://api.github.com/re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