{"action":"created","issue":{"url":"https://api.github.com/repos/voutcn/megahit/issues/12","labels_url":"https://api.github.com/repos/voutcn/megahit/issues/12/labels{/name}","comments_url":"https://api.github.com/repos/voutcn/megahit/issues/12/comments","events_url":"https://api.github.com/repos/voutcn/megahit/issues/12/events","html_url":"https://github.com/voutcn/megahit/issues/12","id":54105333,"number":12,"title":"assembly restart clarification","user":{"login":"bfoster-lbl","id":7998594,"avatar_url":"https://avatars.githubusercontent.com/u/7998594?v=3","gravatar_id":"","url":"https://api.github.com/users/bfoster-lbl","html_url":"https://github.com/bfoster-lbl","followers_url":"https://api.github.com/users/bfoster-lbl/followers","following_url":"https://api.github.com/users/bfoster-lbl/following{/other_user}","gists_url":"https://api.github.com/users/bfoster-lbl/gists{/gist_id}","starred_url":"https://api.github.com/users/bfoster-lbl/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/bfoster-lbl/subscriptions","organizations_url":"https://api.github.com/users/bfoster-lbl/orgs","repos_url":"https://api.github.com/users/bfoster-lbl/repos","events_url":"https://api.github.com/users/bfoster-lbl/events{/privacy}","received_events_url":"https://api.github.com/users/bfoster-lbl/received_events","type":"User","site_admin":false},"labels":[],"state":"open","locked":false,"assignee":null,"milestone":null,"comments":4,"created_at":"2015-01-12T20:54:55Z","updated_at":"2015-01-26T22:29:57Z","closed_at":null,"body":"Hi,\r\nI have a general question regarding megahit assembler.  Since it assembles kmers one after another, I was wondering if it is possible to restart a killed assembly and have it run to completion.  I ask this because our cluster can have a wallclock limit at which point it will terminate the running job.  It would be a nice feature to be able to restart it from where it left off.\r\n\r\nThanks,\r\nbfoster"},"comment":{"url":"https://api.github.com/repos/voutcn/megahit/issues/comments/71552377","html_url":"https://github.com/voutcn/megahit/issues/12#issuecomment-71552377","issue_url":"https://api.github.com/repos/voutcn/megahit/issues/12","id":71552377,"user":{"login":"bfoster-lbl","id":7998594,"avatar_url":"https://avatars.githubusercontent.com/u/7998594?v=3","gravatar_id":"","url":"https://api.github.com/users/bfoster-lbl","html_url":"https://github.com/bfoster-lbl","followers_url":"https://api.github.com/users/bfoster-lbl/followers","following_url":"https://api.github.com/users/bfoster-lbl/following{/other_user}","gists_url":"https://api.github.com/users/bfoster-lbl/gists{/gist_id}","starred_url":"https://api.github.com/users/bfoster-lbl/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/bfoster-lbl/subscriptions","organizations_url":"https://api.github.com/users/bfoster-lbl/orgs","repos_url":"https://api.github.com/users/bfoster-lbl/repos","events_url":"https://api.github.com/users/bfoster-lbl/events{/privacy}","received_events_url":"https://api.github.com/users/bfoster-lbl/received_events","type":"User","site_admin":false},"created_at":"2015-01-26T22:29:57Z","updated_at":"2015-01-26T22:29:57Z","body":"It looks like it is working for me on small datasets too. I will test it on larger sets. This is a great feature!  \r\nWould it be possible to be able to specify --continue on the first run also?  Maybe disregard the --continue flag if it is a first run?  If it were allowed on first run, the user would not have to change the command line at all for resubmission after failure."}}