{"action":"created","issue":{"url":"https://api.github.com/repos/lomereiter/sambamba/issues/125","labels_url":"https://api.github.com/repos/lomereiter/sambamba/issues/125/labels{/name}","comments_url":"https://api.github.com/repos/lomereiter/sambamba/issues/125/comments","events_url":"https://api.github.com/repos/lomereiter/sambamba/issues/125/events","html_url":"https://github.com/lomereiter/sambamba/issues/125","id":59932002,"number":125,"title":"allow samtools path/version in pileup","user":{"login":"inijman","id":6938284,"avatar_url":"https://avatars.githubusercontent.com/u/6938284?v=3","gravatar_id":"","url":"https://api.github.com/users/inijman","html_url":"https://github.com/inijman","followers_url":"https://api.github.com/users/inijman/followers","following_url":"https://api.github.com/users/inijman/following{/other_user}","gists_url":"https://api.github.com/users/inijman/gists{/gist_id}","starred_url":"https://api.github.com/users/inijman/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/inijman/subscriptions","organizations_url":"https://api.github.com/users/inijman/orgs","repos_url":"https://api.github.com/users/inijman/repos","events_url":"https://api.github.com/users/inijman/events{/privacy}","received_events_url":"https://api.github.com/users/inijman/received_events","type":"User","site_admin":false},"labels":[],"state":"open","locked":false,"assignee":{"login":"pjotrp","id":13551,"avatar_url":"https://avatars.githubusercontent.com/u/13551?v=3","gravatar_id":"","url":"https://api.github.com/users/pjotrp","html_url":"https://github.com/pjotrp","followers_url":"https://api.github.com/users/pjotrp/followers","following_url":"https://api.github.com/users/pjotrp/following{/other_user}","gists_url":"https://api.github.com/users/pjotrp/gists{/gist_id}","starred_url":"https://api.github.com/users/pjotrp/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/pjotrp/subscriptions","organizations_url":"https://api.github.com/users/pjotrp/orgs","repos_url":"https://api.github.com/users/pjotrp/repos","events_url":"https://api.github.com/users/pjotrp/events{/privacy}","received_events_url":"https://api.github.com/users/pjotrp/received_events","type":"User","site_admin":false},"milestone":null,"comments":1,"created_at":"2015-03-05T10:21:29Z","updated_at":"2015-04-11T15:06:17Z","closed_at":null,"body":"Since the change in samtools from 0.x to 1.x has a fundamental change in the way pileups are made (ie with or without overlapping reads in PE data) it would be nice to not only take the samtools in $PATH but to allow a specific version."},"comment":{"url":"https://api.github.com/repos/lomereiter/sambamba/issues/comments/91868410","html_url":"https://github.com/lomereiter/sambamba/issues/125#issuecomment-91868410","issue_url":"https://api.github.com/repos/lomereiter/sambamba/issues/125","id":91868410,"user":{"login":"lomereiter","id":662555,"avatar_url":"https://avatars.githubusercontent.com/u/662555?v=3","gravatar_id":"","url":"https://api.github.com/users/lomereiter","html_url":"https://github.com/lomereiter","followers_url":"https://api.github.com/users/lomereiter/followers","following_url":"https://api.github.com/users/lomereiter/following{/other_user}","gists_url":"https://api.github.com/users/lomereiter/gists{/gist_id}","starred_url":"https://api.github.com/users/lomereiter/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/lomereiter/subscriptions","organizations_url":"https://api.github.com/users/lomereiter/orgs","repos_url":"https://api.github.com/users/lomereiter/repos","events_url":"https://api.github.com/users/lomereiter/events{/privacy}","received_events_url":"https://api.github.com/users/lomereiter/received_events","type":"User","site_admin":false},"created_at":"2015-04-11T15:06:17Z","updated_at":"2015-04-11T15:06:17Z","body":"Ies, is it fine to drop support for samtools 0.x already?"}}