{"action":"closed","issue":{"url":"https://api.github.com/repos/statgenlmu/coala/issues/90","labels_url":"https://api.github.com/repos/statgenlmu/coala/issues/90/labels{/name}","comments_url":"https://api.github.com/repos/statgenlmu/coala/issues/90/comments","events_url":"https://api.github.com/repos/statgenlmu/coala/issues/90/events","html_url":"https://github.com/statgenlmu/coala/issues/90","id":95179601,"number":90,"title":"Memory corruption on CRAN","user":{"login":"paulstaab","id":2339377,"avatar_url":"https://avatars.githubusercontent.com/u/2339377?v=3","gravatar_id":"","url":"https://api.github.com/users/paulstaab","html_url":"https://github.com/paulstaab","followers_url":"https://api.github.com/users/paulstaab/followers","following_url":"https://api.github.com/users/paulstaab/following{/other_user}","gists_url":"https://api.github.com/users/paulstaab/gists{/gist_id}","starred_url":"https://api.github.com/users/paulstaab/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/paulstaab/subscriptions","organizations_url":"https://api.github.com/users/paulstaab/orgs","repos_url":"https://api.github.com/users/paulstaab/repos","events_url":"https://api.github.com/users/paulstaab/events{/privacy}","received_events_url":"https://api.github.com/users/paulstaab/received_events","type":"User","site_admin":false},"labels":[{"url":"https://api.github.com/repos/statgenlmu/coala/labels/bug","name":"bug","color":"fc2929"}],"state":"closed","locked":false,"assignee":null,"milestone":{"url":"https://api.github.com/repos/statgenlmu/coala/milestones/3","html_url":"https://github.com/statgenlmu/coala/milestones/0.1.1","labels_url":"https://api.github.com/repos/statgenlmu/coala/milestones/3/labels","id":1209122,"number":3,"title":"0.1.1","description":"","creator":{"login":"paulstaab","id":2339377,"avatar_url":"https://avatars.githubusercontent.com/u/2339377?v=3","gravatar_id":"","url":"https://api.github.com/users/paulstaab","html_url":"https://github.com/paulstaab","followers_url":"https://api.github.com/users/paulstaab/followers","following_url":"https://api.github.com/users/paulstaab/following{/other_user}","gists_url":"https://api.github.com/users/paulstaab/gists{/gist_id}","starred_url":"https://api.github.com/users/paulstaab/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/paulstaab/subscriptions","organizations_url":"https://api.github.com/users/paulstaab/orgs","repos_url":"https://api.github.com/users/paulstaab/repos","events_url":"https://api.github.com/users/paulstaab/events{/privacy}","received_events_url":"https://api.github.com/users/paulstaab/received_events","type":"User","site_admin":false},"open_issues":0,"closed_issues":1,"state":"open","created_at":"2015-07-15T12:27:49Z","updated_at":"2015-07-15T13:29:15Z","due_on":null,"closed_at":null},"comments":1,"created_at":"2015-07-15T12:22:39Z","updated_at":"2015-07-15T13:29:15Z","closed_at":"2015-07-15T13:29:15Z","body":"Valgrind on CRAN finds\r\n\r\n```\r\n> library(testthat)\r\n> test_check(\"coala\")\r\nLoading required package: coala\r\n==25254== Invalid read of size 8\r\n==25254==    at 0x1140ACB6: parse_sg_output(Rcpp::Vector<19, Rcpp::PreserveStorage>, int, Rcpp::Matrix<14, Rcpp::PreserveStorage>, int, int, bool) (packages/tests-vg/coala/src/parse_seqgen_output.cpp:218)\r\n==25254==    by 0x113FDACA: coala_parse_sg_output (packages/tests-vg/coala/src/RcppExports.cpp:45)\r\n==25254==    by 0x479A92: do_dotcall (svn/R-devel/src/main/dotcode.c:1251)\r\n==25254==    by 0x4B1C3E: Rf_eval (svn/R-devel/src/main/eval.c:655)\r\n==25254==    by 0x4B36C8: do_begin (svn/R-devel/src/main/eval.c:1716)\r\n==25254==    by 0x4B1AB0: Rf_eval (svn/R-devel/src/main/eval.c:627)\r\n==25254==    by 0x4B6DBC: Rf_applyClosure (svn/R-devel/src/main/eval.c:1039)\r\n==25254==    by 0x4B18E8: Rf_eval (svn/R-devel/src/main/eval.c:674)\r\n==25254==    by 0x4B4C35: do_set (svn/R-devel/src/main/eval.c:2106)\r\n==25254==    by 0x4B1AB0: Rf_eval (svn/R-devel/src/main/eval.c:627)\r\n==25254==    by 0x4B36C8: do_begin (svn/R-devel/src/main/eval.c:1716)\r\n==25254==    by 0x4B1AB0: Rf_eval (svn/R-devel/src/main/eval.c:627)\r\n==25254==  Address 0xc8ae138 is 1,304 bytes inside a block of size 1,968 alloc'd\r\n==25254==    at 0x4A06BCF: malloc (in /usr/lib64/valgrind/vgpreload_memcheck-amd64-linux.so)\r\n==25254==    by 0x4DE26D: GetNewPage (svn/R-devel/src/main/memory.c:865)\r\n==25254==    by 0x4DFCE1: Rf_allocVector3 (svn/R-devel/src/main/memory.c:2591)\r\n==25254==    by 0x536BA6: Rf_allocVector (svn/R-devel/src/include/Rinlinedfuns.h:194)\r\n==25254==    by 0x536BA6: VectorSubset (svn/R-devel/src/main/subset.c:197)\r\n==25254==    by 0x536BA6: do_subset_dflt (svn/R-devel/src/main/subset.c:820)\r\n==25254==    by 0x4A698F: VECSUBSET_PTR (svn/R-devel/src/main/eval.c:4608)\r\n==25254==    by 0x4A698F: bcEval (svn/R-devel/src/main/eval.c:5699)\r\n==25254==    by 0x4B178F: Rf_eval (svn/R-devel/src/main/eval.c:558)\r\n==25254==    by 0x4B6DBC: Rf_applyClosure (svn/R-devel/src/main/eval.c:1039)\r\n==25254==    by 0x4E30B8: dispatchMethod (svn/R-devel/src/main/objects.c:335)\r\n==25254==    by 0x4E34F9: Rf_usemethod (svn/R-devel/src/main/objects.c:385)\r\n==25254==    by 0x4E3757: do_usemethod (svn/R-devel/src/main/objects.c:451)\r\n==25254==    by 0x4A56CA: bcEval (svn/R-devel/src/main/eval.c:5544)\r\n==25254==    by 0x4B178F: Rf_eval (svn/R-devel/src/main/eval.c:558)\r\n==25254== \r\n```"}}