{"action":"created","issue":{"url":"https://api.github.com/repos/broadinstitute/gatk/issues/1033","labels_url":"https://api.github.com/repos/broadinstitute/gatk/issues/1033/labels{/name}","comments_url":"https://api.github.com/repos/broadinstitute/gatk/issues/1033/comments","events_url":"https://api.github.com/repos/broadinstitute/gatk/issues/1033/events","html_url":"https://github.com/broadinstitute/gatk/issues/1033","id":112664167,"number":1033,"title":"profile and optimize ApplyBQSR","user":{"login":"akiezun","id":1993519,"avatar_url":"https://avatars.githubusercontent.com/u/1993519?v=3","gravatar_id":"","url":"https://api.github.com/users/akiezun","html_url":"https://github.com/akiezun","followers_url":"https://api.github.com/users/akiezun/followers","following_url":"https://api.github.com/users/akiezun/following{/other_user}","gists_url":"https://api.github.com/users/akiezun/gists{/gist_id}","starred_url":"https://api.github.com/users/akiezun/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/akiezun/subscriptions","organizations_url":"https://api.github.com/users/akiezun/orgs","repos_url":"https://api.github.com/users/akiezun/repos","events_url":"https://api.github.com/users/akiezun/events{/privacy}","received_events_url":"https://api.github.com/users/akiezun/received_events","type":"User","site_admin":false},"labels":[{"url":"https://api.github.com/repos/broadinstitute/gatk/labels/BestPracticesPipeline","name":"BestPracticesPipeline","color":"006b75"},{"url":"https://api.github.com/repos/broadinstitute/gatk/labels/profiling","name":"profiling","color":"bfd4f2"}],"state":"open","locked":false,"assignee":{"login":"akiezun","id":1993519,"avatar_url":"https://avatars.githubusercontent.com/u/1993519?v=3","gravatar_id":"","url":"https://api.github.com/users/akiezun","html_url":"https://github.com/akiezun","followers_url":"https://api.github.com/users/akiezun/followers","following_url":"https://api.github.com/users/akiezun/following{/other_user}","gists_url":"https://api.github.com/users/akiezun/gists{/gist_id}","starred_url":"https://api.github.com/users/akiezun/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/akiezun/subscriptions","organizations_url":"https://api.github.com/users/akiezun/orgs","repos_url":"https://api.github.com/users/akiezun/repos","events_url":"https://api.github.com/users/akiezun/events{/privacy}","received_events_url":"https://api.github.com/users/akiezun/received_events","type":"User","site_admin":false},"milestone":{"url":"https://api.github.com/repos/broadinstitute/gatk/milestones/5","html_url":"https://github.com/broadinstitute/gatk/milestones/alpha","labels_url":"https://api.github.com/repos/broadinstitute/gatk/milestones/5/labels","id":1220227,"number":5,"title":"alpha","description":"","creator":{"login":"akiezun","id":1993519,"avatar_url":"https://avatars.githubusercontent.com/u/1993519?v=3","gravatar_id":"","url":"https://api.github.com/users/akiezun","html_url":"https://github.com/akiezun","followers_url":"https://api.github.com/users/akiezun/followers","following_url":"https://api.github.com/users/akiezun/following{/other_user}","gists_url":"https://api.github.com/users/akiezun/gists{/gist_id}","starred_url":"https://api.github.com/users/akiezun/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/akiezun/subscriptions","organizations_url":"https://api.github.com/users/akiezun/orgs","repos_url":"https://api.github.com/users/akiezun/repos","events_url":"https://api.github.com/users/akiezun/events{/privacy}","received_events_url":"https://api.github.com/users/akiezun/received_events","type":"User","site_admin":false},"open_issues":62,"closed_issues":93,"state":"open","created_at":"2015-07-22T13:37:37Z","updated_at":"2015-10-23T15:10:59Z","due_on":"2015-11-20T05:00:00Z","closed_at":null},"comments":2,"created_at":"2015-10-21T19:41:18Z","updated_at":"2015-10-23T18:16:03Z","closed_at":null,"body":"the goal is to be at least same as gatk3.4 on single thread. This is for the walker version of the tool.\r\nThe ticket can be split into a) profile and b) optimize if needed"},"comment":{"url":"https://api.github.com/repos/broadinstitute/gatk/issues/comments/150652588","html_url":"https://github.com/broadinstitute/gatk/issues/1033#issuecomment-150652588","issue_url":"https://api.github.com/repos/broadinstitute/gatk/issues/1033","id":150652588,"user":{"login":"droazen","id":798637,"avatar_url":"https://avatars.githubusercontent.com/u/798637?v=3","gravatar_id":"","url":"https://api.github.com/users/droazen","html_url":"https://github.com/droazen","followers_url":"https://api.github.com/users/droazen/followers","following_url":"https://api.github.com/users/droazen/following{/other_user}","gists_url":"https://api.github.com/users/droazen/gists{/gist_id}","starred_url":"https://api.github.com/users/droazen/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/droazen/subscriptions","organizations_url":"https://api.github.com/users/droazen/orgs","repos_url":"https://api.github.com/users/droazen/repos","events_url":"https://api.github.com/users/droazen/events{/privacy}","received_events_url":"https://api.github.com/users/droazen/received_events","type":"User","site_admin":false},"created_at":"2015-10-23T18:16:03Z","updated_at":"2015-10-23T18:16:03Z","body":"Can you repeat this same test over an NFS filesystem from a Broad server?"}}