{"action":"created","issue":{"url":"https://api.github.com/repos/biopython/biopython/issues/735","labels_url":"https://api.github.com/repos/biopython/biopython/issues/735/labels{/name}","comments_url":"https://api.github.com/repos/biopython/biopython/issues/735/comments","events_url":"https://api.github.com/repos/biopython/biopython/issues/735/events","html_url":"https://github.com/biopython/biopython/issues/735","id":123044685,"number":735,"title":"Entrez Tutorial, \"journals\", is no longer in Entrez databases.","user":{"login":"vincentdavis","id":232564,"avatar_url":"https://avatars.githubusercontent.com/u/232564?v=3","gravatar_id":"","url":"https://api.github.com/users/vincentdavis","html_url":"https://github.com/vincentdavis","followers_url":"https://api.github.com/users/vincentdavis/followers","following_url":"https://api.github.com/users/vincentdavis/following{/other_user}","gists_url":"https://api.github.com/users/vincentdavis/gists{/gist_id}","starred_url":"https://api.github.com/users/vincentdavis/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/vincentdavis/subscriptions","organizations_url":"https://api.github.com/users/vincentdavis/orgs","repos_url":"https://api.github.com/users/vincentdavis/repos","events_url":"https://api.github.com/users/vincentdavis/events{/privacy}","received_events_url":"https://api.github.com/users/vincentdavis/received_events","type":"User","site_admin":false},"labels":[],"state":"open","locked":false,"assignee":null,"milestone":null,"comments":5,"created_at":"2015-12-18T23:43:33Z","updated_at":"2015-12-22T13:28:52Z","closed_at":null,"body":"The Journals DB is used in this example:\r\nhttps://github.com/biopython/biopython/blob/master/Doc/Tutorial/chapter_entrez.tex#L203\r\n>>> handle = Entrez.esearch(db=\"journals\", term=\"computational\")\r\n>>> record = Entrez.read(handle)\r\n>>> record[\"Count\"]\r\n'16'\r\n\r\nI think for the examples pubmed db will work.\r\n\r\n\"journals\" is also referanced, is several other place in the section. (not a comlete list)\r\nhttps://github.com/biopython/biopython/blob/master/Doc/Tutorial/chapter_entrez.tex#L89\r\nhttps://github.com/biopython/biopython/blob/master/Doc/Tutorial/chapter_entrez.tex#L128\r\nhttps://github.com/biopython/biopython/blob/master/Doc/Tutorial/chapter_entrez.tex#L212\r\nhttps://github.com/biopython/biopython/blob/master/Doc/Tutorial/chapter_entrez.tex#L260"},"comment":{"url":"https://api.github.com/repos/biopython/biopython/issues/comments/166618264","html_url":"https://github.com/biopython/biopython/issues/735#issuecomment-166618264","issue_url":"https://api.github.com/repos/biopython/biopython/issues/735","id":166618264,"user":{"login":"vincentdavis","id":232564,"avatar_url":"https://avatars.githubusercontent.com/u/232564?v=3","gravatar_id":"","url":"https://api.github.com/users/vincentdavis","html_url":"https://github.com/vincentdavis","followers_url":"https://api.github.com/users/vincentdavis/followers","following_url":"https://api.github.com/users/vincentdavis/following{/other_user}","gists_url":"https://api.github.com/users/vincentdavis/gists{/gist_id}","starred_url":"https://api.github.com/users/vincentdavis/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/vincentdavis/subscriptions","organizations_url":"https://api.github.com/users/vincentdavis/orgs","repos_url":"https://api.github.com/users/vincentdavis/repos","events_url":"https://api.github.com/users/vincentdavis/events{/privacy}","received_events_url":"https://api.github.com/users/vincentdavis/received_events","type":"User","site_admin":false},"created_at":"2015-12-22T13:28:52Z","updated_at":"2015-12-22T13:28:52Z","body":"Yes, I will work on that this week.\n\nVincent Davis\n720-301-3003\n\nOn Tue, Dec 22, 2015 at 4:43 AM, Peter Cock <notifications@github.com>\nwrote:\n\n> Thanks for confirming that - are you interested to rework the examples to\n> use the pubmed database or NLM catalogue?\n>\n> —\n> Reply to this email directly or view it on GitHub\n> <https://github.com/biopython/biopython/issues/735#issuecomment-166578768>\n> .\n>\n"}}