{"action":"created","issue":{"url":"https://api.github.com/repos/geodynamics/specfem3d/issues/330","labels_url":"https://api.github.com/repos/geodynamics/specfem3d/issues/330/labels{/name}","comments_url":"https://api.github.com/repos/geodynamics/specfem3d/issues/330/comments","events_url":"https://api.github.com/repos/geodynamics/specfem3d/issues/330/events","html_url":"https://github.com/geodynamics/specfem3d/issues/330","id":52487445,"number":330,"title":"boundary_definition in CUBIT_GEOCUBIT fails on Trelis","user":{"login":"specfem3d-zhang-ksu","id":10223072,"avatar_url":"https://avatars.githubusercontent.com/u/10223072?v=3","gravatar_id":"","url":"https://api.github.com/users/specfem3d-zhang-ksu","html_url":"https://github.com/specfem3d-zhang-ksu","followers_url":"https://api.github.com/users/specfem3d-zhang-ksu/followers","following_url":"https://api.github.com/users/specfem3d-zhang-ksu/following{/other_user}","gists_url":"https://api.github.com/users/specfem3d-zhang-ksu/gists{/gist_id}","starred_url":"https://api.github.com/users/specfem3d-zhang-ksu/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/specfem3d-zhang-ksu/subscriptions","organizations_url":"https://api.github.com/users/specfem3d-zhang-ksu/orgs","repos_url":"https://api.github.com/users/specfem3d-zhang-ksu/repos","events_url":"https://api.github.com/users/specfem3d-zhang-ksu/events{/privacy}","received_events_url":"https://api.github.com/users/specfem3d-zhang-ksu/received_events","type":"User","site_admin":false},"labels":[],"state":"open","locked":false,"assignee":null,"milestone":null,"comments":4,"created_at":"2014-12-19T14:20:55Z","updated_at":"2015-02-09T11:25:07Z","closed_at":null,"body":"the boundary_definition does not work properly to define the block and later to assign material properties to the block. Here is a history file by running the EXAMPLES/layered_halfspace/2lay_mesh_boundary_fig8.py. This run is on Trelis 15.01, and my python version is 2.6.6. I have not run this script on other Trelis or cubit but I was told from csimsoft.com that same thing happens on Trelis 15.1. Running other examples gets the same problem. \r\n\r\n********** Now playing /home/chzhang_ksu/specfem3d/EXAMPLES/layered_halfspace/2lay_mesh_boundary_fig8.py **********\r\n\r\nTrelis>#!/usr/bin/env python\r\nTrelis>\r\nTrelis>###########################################################################\r\nTrelis>#### TNM: This is the mesh generation, adapted from a journal file\r\nTrelis>####      specific to the settings of Komatitsch and Tromp 1999, Fig.8\r\nTrelis>####      Aug 2009\r\nTrelis>###########################################################################\r\nTrelis>\r\nTrelis>\r\nTrelis>\r\nTrelis>\r\nTrelis>\r\nTrelis>\r\nTrelis>\r\nTrelis>\r\nTrelis>reset\r\nDefault CUBIT model file is '/home/chzhang_ksu/specfem3d/EXAMPLES/layered_halfspace/cubit01.cub'\r\n\r\nFinished Command: reset\r\n\r\nTrelis>brick x 134000 y 134000 z 60000\r\nSuccessfully created brick volume 1\r\nFinished Command: brick x 134000 y 134000 z 60000\r\n\r\nTrelis>\r\nTrelis># This seems to conflict with boundary_definition.py\r\nTrelis># ....which leaves the model space at e.g. x=[-67,67] km\r\nTrelis>volume 1 move x 67000 y 67000 z -30000\r\nFinished Command: volume 1 move x 67000 y 67000 z -30000\r\n\r\nTrelis>\r\nTrelis># create vertices for discontinuity\r\nTrelis>\r\nTrelis>split curve 9  distance '+str(distance))\r\nPreserving undo information...done\r\nUpdated volume(s): 1\r\nFinished Command: split curve 9 distance 3000\r\n\r\nTrelis>split curve 10  distance '+str(distance))\r\nPreserving undo information...done\r\nUpdated volume(s): 1\r\nFinished Command: split curve 10 distance 3000\r\n\r\nTrelis>split curve 11  distance '+str(distance))\r\nPreserving undo information...done\r\nUpdated volume(s): 1\r\nFinished Command: split curve 11 distance 3000\r\n\r\nTrelis>split curve 12  distance '+str(distance))\r\nPreserving undo information...done\r\nUpdated volume(s): 1\r\nFinished Command: split curve 12 distance 3000\r\n\r\nTrelis>\r\nTrelis># create surface for interface\r\nTrelis># surface at 3 km depth\r\nTrelis>create surface vertex 9 10 12 11\r\n\r\nCreation of Surface 7 (Surface 7) Successful.\r\nThis is sheet body 2 (Body 2)\r\nFinished Command: create surface vertex 9 10 12 11\r\n\r\nTrelis>\r\nTrelis>section volume 1 with surface 7 keep normal\r\nCreated volume(s): 3\r\nSECTION successfully completed\r\nCreated volume 3\r\nFinished Command: section volume 1 with surface 7 keep normal\r\n\r\nTrelis>section volume 1 with surface 7 reverse\r\nPreserving undo information...done\r\nUpdated volume(s): 1\r\nSECTION successfully completed\r\nCreated volume 1\r\nFinished Command: section volume 1 with surface 7 reverse\r\n\r\nTrelis>\r\nTrelis># create vertices for auxiliary interface to allow for refinement\r\nTrelis>#distance = 9000\r\nTrelis># to have a surface at 25050 m depth, such that point force source can be located exactly\r\nTrelis># on a GLL point at that depth as in Komatitsch et al. (1999)\r\nTrelis>\r\nTrelis>split curve 29  distance '+str(distance))\r\nPreserving undo information...done\r\nUpdated volume(s): 3\r\nFinished Command: split curve 29 distance 22050\r\n\r\nTrelis>split curve 31  distance '+str(distance))\r\nPreserving undo information...done\r\nUpdated volume(s): 3\r\nFinished Command: split curve 31 distance 22050\r\n\r\nTrelis>split curve 32  distance '+str(distance))\r\nPreserving undo information...done\r\nUpdated volume(s): 3\r\nFinished Command: split curve 32 distance 22050\r\n\r\nTrelis>split curve 36  distance '+str(distance))\r\nPreserving undo information...done\r\nUpdated volume(s): 3\r\nFinished Command: split curve 36 distance 22050\r\n\r\nTrelis>\r\nTrelis>\r\nTrelis># create surface for buffer interface to refine BELOW the discontinuity\r\nTrelis># surface at 3 km depth\r\nTrelis>create surface vertex 25 26 28 27\r\n\r\nCreation of Surface 19 (Surface 19) Successful.\r\nThis is sheet body 4 (Body 4)\r\nFinished Command: create surface vertex 25 26 28 27\r\n\r\nTrelis>\r\nTrelis>section volume 3 with surface 19 keep normal\r\nCreated volume(s): 5\r\nSECTION successfully completed\r\nCreated volume 5\r\nFinished Command: section volume 3 with surface 19 keep normal\r\n\r\nTrelis>section volume 3 with surface 19 reverse\r\nPreserving undo information...done\r\nUpdated volume(s): 3\r\nSECTION successfully completed\r\nCreated volume 3\r\nFinished Command: section volume 3 with surface 19 reverse\r\n\r\nTrelis>\r\nTrelis>delete volume 2 4\r\nPreserving undo information...done\r\nDeleted volume 2\r\nDeleted volume 4\r\nFinished Command: delete volume 2 4\r\n\r\nTrelis>\r\nTrelis>merge all\r\n\r\n...Merging all features in the model\r\n\r\n...Merging all Surfaces in the model\r\nConsolidated 2 pairs of surfaces\r\n\r\n...Merging all Curves in the model\r\nConsolidated 0 pair of curves\r\n\r\n...Merging all Vertices in the model\r\nConsolidated 0 pairs of vertices\r\nAll detected matches successfully merged\r\nFinished Command: merge all\r\n\r\nTrelis>imprint all\r\nPreserving undo information...done\r\nGroup imprint finished.\r\nIMPRINT completed.\r\nFinished Command: imprint all\r\n\r\nTrelis>\r\nTrelis># Meshing the volumes\r\nTrelis>## middle volume\r\nTrelis>#cubit.cmd('volume 3 size 3589.2')\r\nTrelis>volume 3 size 4500.\r\nFinished Command: volume 3 size 4500\r\n\r\nTrelis>mesh volume 3\r\nVolume 3 (Volume 3) meshing scheme automatically set to submap.\r\nMatching intervals successful.\r\nMeshing Volume 3 (Volume 3)\r\nGenerated 900 faces for Surface 20 (Surface 20).\r\nGenerated 150 faces for Surface 27 (Surface 27).\r\nGenerated 150 faces for Surface 28 (Surface 28).\r\nGenerated 900 faces for Surface 8 (Surface 8).\r\nGenerated 150 faces for Surface 29 (Surface 29).\r\nGenerated 150 faces for Surface 30 (Surface 30).\r\nGenerated 4500 hexes for Volume 3 (Volume 3).\r\nVolume 3 (Volume 3) meshing completed using scheme: submap\r\n\r\nMeshing time: 0.160000\r\nFinished Command: mesh volume 3\r\n\r\nTrelis>\r\nTrelis># refine boundary surface between top and middle volume\r\nTrelis># this will create a tripling layer from the bottom to the top in the middle volume\r\nTrelis>refine surface 8 numsplit 1 bias 1.0 depth 1\r\nFinished Command: refine surface 8 numsplit 1 bias 1 depth 1\r\n\r\nTrelis>\r\nTrelis>#cubit.cmd('pause')\r\nTrelis>\r\nTrelis>## top volume\r\nTrelis>#cubit.cmd('volume 1 size 1196.4')\r\nTrelis>volume 1 size 1000.0\r\nFinished Command: volume 1 size 1000\r\n\r\nTrelis>mesh volume 1\r\nVolume 1 (Volume 1) meshing scheme automatically set to submap.\r\nMatching intervals successful.\r\nMeshing Volume 1 (Volume 1)\r\nGenerated 270 faces for Surface 15 (Surface 15).\r\nGenerated 270 faces for Surface 16 (Surface 16).\r\nGenerated 8100 faces for Surface 1 (Surface 1).\r\nGenerated 270 faces for Surface 17 (Surface 17).\r\nGenerated 270 faces for Surface 18 (Surface 18).\r\nGenerated 24300 hexes for Volume 1 (Volume 1).\r\nVolume 1 (Volume 1) meshing completed using scheme: submap\r\n\r\nMeshing time: 0.360000\r\nFinished Command: mesh volume 1\r\n\r\nTrelis>\r\nTrelis>#cubit.cmd('pause')\r\nTrelis>\r\nTrelis>## bottom volume\r\nTrelis>#cubit.cmd('volume 5 size 4785.71')\r\nTrelis>volume 5 size 4500.\r\nFinished Command: volume 5 size 4500\r\n\r\nTrelis>mesh volume 5\r\nVolume 5 (Volume 5) meshing scheme automatically set to submap.\r\nMatching intervals successful.\r\nMeshing Volume 5 (Volume 5)\r\nGenerated 240 faces for Surface 21 (Surface 21).\r\nGenerated 240 faces for Surface 22 (Surface 22).\r\nGenerated 240 faces for Surface 23 (Surface 23).\r\nGenerated 240 faces for Surface 24 (Surface 24).\r\nGenerated 900 faces for Surface 25 (Surface 25).\r\nGenerated 7200 hexes for Volume 5 (Volume 5).\r\nVolume 5 (Volume 5) meshing completed using scheme: submap\r\n\r\nMeshing time: 0.150000\r\nFinished Command: mesh volume 5\r\n\r\nTrelis>\r\nTrelis># draw/update mesh lines for visualization\r\nTrelis># this will draw also the tripling layer mesh lines\r\nTrelis>draw volume all\r\nTrelis>\r\nTrelis>#### End of meshing\r\nTrelis>\r\nTrelis>###### This is boundary_definition.py of GEOCUBIT\r\nTrelis>#..... which extracts the bounding faces and defines them into blocks\r\nTrelis>\r\nTrelis>\r\nproc  0  is has absorbing boundary xmin\r\nproc  0  is has absorbing boundary ymin\r\nproc  0  is has absorbing boundary xmax\r\nproc  0  is has absorbing boundary ymax\r\nblock 4 hex in vol 1 except hex in vol [3, 5]\r\nWARNING: No entity with ID 4 was found\r\nFinished Command: block 4 hex in volume 1 except hex in volume 3 5\r\n\r\nFinished Command: block 4 name \"vol1\"\r\n\r\nblock 5 hex in vol 3 except hex in vol [1, 5]\r\nWARNING: No entity with ID 5 was found\r\nFinished Command: block 5 hex in volume 3 except hex in volume 1 5\r\n\r\nFinished Command: block 5 name \"vol3\"\r\n\r\nblock 6 hex in vol 5 except hex in vol [1, 3]\r\nWARNING: No entity with ID 6 was found\r\nFinished Command: block 6 hex in volume 5 except hex in volume 1 3\r\n\r\nFinished Command: block 6 name \"vol5\"\r\n\r\nTrelis>\r\nTrelis>#### Define material properties for the 3 volumes ################\r\nTrelis>#### DEFINE MATERIAL PROPERTIES #######################\r\nTrelis>block 1 name \"elastic 1\"\r\nWARNING: No entity with ID 1 was found\r\nERROR: /home/chzhang/specfem3d/EXAMPLES/layered_halfspace/2lay_mesh_boundary_fig8.py (98)\r\n       No entity with ID 1 was found\r\nERROR: /home/chzhang/specfem3d/EXAMPLES/layered_halfspace/2lay_mesh_boundary_fig8.py (98)\r\n       No entities specified.\r\nTrelis>block 1 attribute count 6\r\nWARNING: No entity with ID 1 was found\r\nERROR: /home/chzhang/specfem3d/EXAMPLES/layered_halfspace/2lay_mesh_boundary_fig8.py (99)\r\n       No entity with ID 1 was found\r\nERROR: /home/chzhang/specfem3d/EXAMPLES/layered_halfspace/2lay_mesh_boundary_fig8.py (99)\r\n       No entities specified.\r\nTrelis>block 1 attribute index 1 1 \r\nWARNING: No entity with ID 1 was found\r\nERROR: /home/chzhang/specfem3d/EXAMPLES/layered_halfspace/2lay_mesh_boundary_fig8.py (100)\r\n       No entity with ID 1 was found\r\nERROR: /home/chzhang/specfem3d/EXAMPLES/layered_halfspace/2lay_mesh_boundary_fig8.py (100)\r\n       No entities specified.\r\nTrelis>block 1 attribute index 2 2800\r\nWARNING: No entity with ID 1 was found\r\nERROR: /home/chzhang/specfem3d/EXAMPLES/layered_halfspace/2lay_mesh_boundary_fig8.py (101)\r\n       No entity with ID 1 was found\r\nERROR: /home/chzhang/specfem3d/EXAMPLES/layered_halfspace/2lay_mesh_boundary_fig8.py (101)\r\n       No entities specified.\r\nTrelis>block 1 attribute index 3 1500\r\nWARNING: No entity with ID 1 was found\r\nERROR: /home/chzhang/specfem3d/EXAMPLES/layered_halfspace/2lay_mesh_boundary_fig8.py (102)\r\n       No entity with ID 1 was found\r\nERROR: /home/chzhang/specfem3d/EXAMPLES/layered_halfspace/2lay_mesh_boundary_fig8.py (102)\r\n       No entities specified.\r\nTrelis>block 1 attribute index 4 2300\r\nWARNING: No entity with ID 1 was found\r\nERROR: /home/chzhang/specfem3d/EXAMPLES/layered_halfspace/2lay_mesh_boundary_fig8.py (103)\r\n       No entity with ID 1 was found\r\nERROR: /home/chzhang/specfem3d/EXAMPLES/layered_halfspace/2lay_mesh_boundary_fig8.py (103)\r\n       No entities specified.\r\nTrelis>block 1 attribute index 5 9000.0\r\nWARNING: No entity with ID 1 was found\r\nERROR: /home/chzhang/specfem3d/EXAMPLES/layered_halfspace/2lay_mesh_boundary_fig8.py (104)\r\n       No entity with ID 1 was found\r\nERROR: /home/chzhang/specfem3d/EXAMPLES/layered_halfspace/2lay_mesh_boundary_fig8.py (104)\r\n       No entities specified.\r\nTrelis>block 1 attribute index 6 0\r\nWARNING: No entity with ID 1 was found\r\nERROR: /home/chzhang/specfem3d/EXAMPLES/layered_halfspace/2lay_mesh_boundary_fig8.py (105)\r\n       No entity with ID 1 was found\r\nERROR: /home/chzhang/specfem3d/EXAMPLES/layered_halfspace/2lay_mesh_boundary_fig8.py (105)\r\n       No entities specified.\r\nTrelis>\r\nTrelis>block 2 name \"elastic 2\"\r\nWARNING: No entity with ID 2 was found\r\nERROR: /home/chzhang/specfem3d/EXAMPLES/layered_halfspace/2lay_mesh_boundary_fig8.py (107)\r\n       No entity with ID 2 was found\r\nERROR: /home/chzhang/specfem3d/EXAMPLES/layered_halfspace/2lay_mesh_boundary_fig8.py (107)\r\n       No entities specified.\r\nTrelis>block 2 attribute count 6\r\nWARNING: No entity with ID 2 was found\r\nERROR: /home/chzhang/specfem3d/EXAMPLES/layered_halfspace/2lay_mesh_boundary_fig8.py (108)\r\n       No entity with ID 2 was found\r\nERROR: /home/chzhang/specfem3d/EXAMPLES/layered_halfspace/2lay_mesh_boundary_fig8.py (108)\r\n       No entities specified.\r\nTrelis>block 2 attribute index 1 2 \r\nWARNING: No entity with ID 2 was found\r\nERROR: /home/chzhang/specfem3d/EXAMPLES/layered_halfspace/2lay_mesh_boundary_fig8.py (109)\r\n       No entity with ID 2 was found\r\nERROR: /home/chzhang/specfem3d/EXAMPLES/layered_halfspace/2lay_mesh_boundary_fig8.py (109)\r\n       No entities specified.\r\nTrelis>block 2 attribute index 2 7500\r\nWARNING: No entity with ID 2 was found\r\nERROR: /home/chzhang/specfem3d/EXAMPLES/layered_halfspace/2lay_mesh_boundary_fig8.py (110)\r\n       No entity with ID 2 was found\r\nERROR: /home/chzhang/specfem3d/EXAMPLES/layered_halfspace/2lay_mesh_boundary_fig8.py (110)\r\n       No entities specified.\r\nTrelis>block 2 attribute index 3 4300\r\nWARNING: No entity with ID 2 was found\r\nERROR: /home/chzhang/specfem3d/EXAMPLES/layered_halfspace/2lay_mesh_boundary_fig8.py (111)\r\n       No entity with ID 2 was found\r\nERROR: /home/chzhang/specfem3d/EXAMPLES/layered_halfspace/2lay_mesh_boundary_fig8.py (111)\r\n       No entities specified.\r\nTrelis>block 2 attribute index 4 3200\r\nWARNING: No entity with ID 2 was found\r\nERROR: /home/chzhang/specfem3d/EXAMPLES/layered_halfspace/2lay_mesh_boundary_fig8.py (112)\r\n       No entity with ID 2 was found\r\nERROR: /home/chzhang/specfem3d/EXAMPLES/layered_halfspace/2lay_mesh_boundary_fig8.py (112)\r\n       No entities specified.\r\nTrelis>block 2 attribute index 5 9000.0\r\nWARNING: No entity with ID 2 was found\r\nERROR: /home/chzhang/specfem3d/EXAMPLES/layered_halfspace/2lay_mesh_boundary_fig8.py (113)\r\n       No entity with ID 2 was found\r\nERROR: /home/chzhang/specfem3d/EXAMPLES/layered_halfspace/2lay_mesh_boundary_fig8.py (113)\r\n       No entities specified.\r\nTrelis>block 2 attribute index 6 0\r\nWARNING: No entity with ID 2 was found\r\nERROR: /home/chzhang/specfem3d/EXAMPLES/layered_halfspace/2lay_mesh_boundary_fig8.py (114)\r\n       No entity with ID 2 was found\r\nERROR: /home/chzhang/specfem3d/EXAMPLES/layered_halfspace/2lay_mesh_boundary_fig8.py (114)\r\n       No entities specified.\r\nTrelis>\r\nTrelis>block 3 name \"elastic 3\"\r\nWARNING: No entity with ID 3 was found\r\nERROR: /home/chzhang/specfem3d/EXAMPLES/layered_halfspace/2lay_mesh_boundary_fig8.py (116)\r\n       No entity with ID 3 was found\r\nERROR: /home/chzhang/specfem3d/EXAMPLES/layered_halfspace/2lay_mesh_boundary_fig8.py (116)\r\n       No entities specified.\r\nTrelis>block 3 attribute count 6\r\nWARNING: No entity with ID 3 was found\r\nERROR: /home/chzhang/specfem3d/EXAMPLES/layered_halfspace/2lay_mesh_boundary_fig8.py (117)\r\n       No entity with ID 3 was found\r\nERROR: /home/chzhang/specfem3d/EXAMPLES/layered_halfspace/2lay_mesh_boundary_fig8.py (117)\r\n       No entities specified.\r\nTrelis>block 3 attribute index 1 3 \r\nWARNING: No entity with ID 3 was found\r\nERROR: /home/chzhang/specfem3d/EXAMPLES/layered_halfspace/2lay_mesh_boundary_fig8.py (118)\r\n       No entity with ID 3 was found\r\nERROR: /home/chzhang/specfem3d/EXAMPLES/layered_halfspace/2lay_mesh_boundary_fig8.py (118)\r\n       No entities specified.\r\nTrelis>block 3 attribute index 2 7500\r\nWARNING: No entity with ID 3 was found\r\nERROR: /home/chzhang/specfem3d/EXAMPLES/layered_halfspace/2lay_mesh_boundary_fig8.py (119)\r\n       No entity with ID 3 was found\r\nERROR: /home/chzhang/specfem3d/EXAMPLES/layered_halfspace/2lay_mesh_boundary_fig8.py (119)\r\n       No entities specified.\r\nTrelis>block 3 attribute index 3 4300\r\nWARNING: No entity with ID 3 was found\r\nERROR: /home/chzhang/specfem3d/EXAMPLES/layered_halfspace/2lay_mesh_boundary_fig8.py (120)\r\n       No entity with ID 3 was found\r\nERROR: /home/chzhang/specfem3d/EXAMPLES/layered_halfspace/2lay_mesh_boundary_fig8.py (120)\r\n       No entities specified.\r\nTrelis>block 3 attribute index 4 3200\r\nWARNING: No entity with ID 3 was found\r\nERROR: /home/chzhang/specfem3d/EXAMPLES/layered_halfspace/2lay_mesh_boundary_fig8.py (121)\r\n       No entity with ID 3 was found\r\nERROR: /home/chzhang/specfem3d/EXAMPLES/layered_halfspace/2lay_mesh_boundary_fig8.py (121)\r\n       No entities specified.\r\nTrelis>block 3 attribute index 5 9000.0\r\nWARNING: No entity with ID 3 was found\r\nERROR: /home/chzhang/specfem3d/EXAMPLES/layered_halfspace/2lay_mesh_boundary_fig8.py (122)\r\n       No entity with ID 3 was found\r\nERROR: /home/chzhang/specfem3d/EXAMPLES/layered_halfspace/2lay_mesh_boundary_fig8.py (122)\r\n       No entities specified.\r\nTrelis>block 3 attribute index 6 0\r\nWARNING: No entity with ID 3 was found\r\nERROR: /home/chzhang/specfem3d/EXAMPLES/layered_halfspace/2lay_mesh_boundary_fig8.py (123)\r\n       No entity with ID 3 was found\r\nERROR: /home/chzhang/specfem3d/EXAMPLES/layered_halfspace/2lay_mesh_boundary_fig8.py (123)\r\n       No entities specified.\r\nTrelis>\r\nTrelis>export mesh \"top.e\" dimension 3 overwrite\r\n\r\nUsing ExodusII API version 4.98 and DB version 4.98 to export \"top.e\".\r\n\r\n\r\nExecutive Exodus summary:\r\n  Number of dimensions     = 3\r\n  Number of element blocks = 3\r\n  Number of sidesets       = 0\r\n  Number of nodesets       = 0\r\n  Number of bc sets        = 1\r\n  Number of elements       = 70200\r\n  Number of nodes          = 76819\r\n\r\nFinished writing top.e\r\nFinished Command: export mesh \"top.e\" dimension 3 overwrite\r\n\r\nTrelis>save as \"meshing.cub\" overwrite\r\n\r\nExported:   3 Volumes\r\n\r\nSuccessfully saved CUBIT file 'meshing.cub'\r\nFinished Command: save as \"meshing.cub\" overwrite\r\n\r\nTrelis>\r\nTrelis>#### Export to SPECFEM3D format using cubit2specfem3d.py of GEOCUBIT\r\nTrelis>\r\nTrelis>\r\nTrelis>\r\nHEX Blocks:\r\nblock  4 material flag  4\r\nblock  5 material flag  5\r\nblock  6 material flag  6\r\nAbsorbing Boundary Conditions:\r\nTopography (free surface)\r\nNone\r\nFree surface\r\nNone\r\nPreserving undo information...done\r\nFinished Command: compress all\r\n\r\nTurning informational messages off.\r\nWriting MESH/mesh_file.....\r\n total number of elements: 70200\r\nblock  4  hexes  24300\r\nblock  5  hexes  38700\r\nblock  6  hexes  7200\r\nWriting MESH/materials_file.....\r\nblock  4 flag  4\r\nblock  5 flag  5\r\nblock  6 flag  6\r\nWriting MESH/nodes_coords_file.....\r\n  number of nodes: 76819\r\nWriting MESH/free_or_absorbing_surface_file_zmax.....\r\nEchoing has been turned ON\r\nFinished Command: set echo on\r\n\r\nTurning informational messages off.\r\nEchoing has been turned ON\r\nFinished Command: set echo on\r\n\r\nWriting MESH/nummaterial_velocity_file.....\r\nTurning informational messages on.\r\nFinished Command: set info on\r\n\r\nEchoing has been turned ON\r\nFinished Command: set echo on\r\n\r\nEND SPECFEM3D exporting process......\r\nTrelis>\r\nTrelis># all files needed by SCOTCH are now in directory MESH\r\nTrelis>\r\nTrelis>"},"comment":{"url":"https://api.github.com/repos/geodynamics/specfem3d/issues/comments/73493813","html_url":"https://github.com/geodynamics/specfem3d/issues/330#issuecomment-73493813","issue_url":"https://api.github.com/repos/geodynamics/specfem3d/issues/330","id":73493813,"user":{"login":"casarotti","id":66408,"avatar_url":"https://avatars.githubusercontent.com/u/66408?v=3","gravatar_id":"","url":"https://api.github.com/users/casarotti","html_url":"https://github.com/casarotti","followers_url":"https://api.github.com/users/casarotti/followers","following_url":"https://api.github.com/users/casarotti/following{/other_user}","gists_url":"https://api.github.com/users/casarotti/gists{/gist_id}","starred_url":"https://api.github.com/users/casarotti/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/casarotti/subscriptions","organizations_url":"https://api.github.com/users/casarotti/orgs","repos_url":"https://api.github.com/users/casarotti/repos","events_url":"https://api.github.com/users/casarotti/events{/privacy}","received_events_url":"https://api.github.com/users/casarotti/received_events","type":"User","site_admin":false},"created_at":"2015-02-09T11:25:06Z","updated_at":"2015-02-09T11:25:06Z","body":"this should be ok now....\nmaybe not on the master\n\nOn Mon Feb 09 2015 at 11:31:59 Dimitri Komatitsch <notifications@github.com>\nwrote:\n\n> Hi @specfem3d-zhang-ksu <https://github.com/specfem3d-zhang-ksu> and\n> @casarotti <https://github.com/casarotti> ,\n>\n> Any update on this bug? Can I close the issue on GitHub?\n>\n> Thanks,\n> Dimitri.\n>\n> —\n> Reply to this email directly or view it on GitHub\n> <https://github.com/geodynamics/specfem3d/issues/330#issuecomment-73487234>\n> .\n>\n"}}