{"push_id":894753659,"size":12,"distinct_size":1,"ref":"refs/heads/read","head":"ea366ea67adba122b1ee0ae5756f0f543ef82e94","before":"b0cf9e93f7044253ac5d3c3a683b7b5d0dec6648","commits":[{"sha":"6987d370e4a7d960e3087ea2571ef16de45729e6","author":{"email":"c1b0502f8bb10052cdda6ebe4099533dc4e32e66@umich.edu","name":"Raymond Cavalcante"},"message":"Import dplyr for summaries and pre-visualization\n\n* dplyr's various functions for grouping and summarizing data are much\nfaster than base functions. (http://www.brodieg.com/?p=7)","distinct":false,"url":"https://api.github.com/repos/rcavalcante/annotatr/commits/6987d370e4a7d960e3087ea2571ef16de45729e6"},{"sha":"62f49e7f8ae696ff42a864a74851bc0bb999cf0a","author":{"email":"c1b0502f8bb10052cdda6ebe4099533dc4e32e66@umich.edu","name":"Raymond Cavalcante"},"message":"Revert \"Import dplyr for summaries and pre-visualization\"\n\nThis reverts commit 6987d370e4a7d960e3087ea2571ef16de45729e6.","distinct":false,"url":"https://api.github.com/repos/rcavalcante/annotatr/commits/62f49e7f8ae696ff42a864a74851bc0bb999cf0a"},{"sha":"81cc375056969a7fd0aa81f2243fb6cd6d46a120","author":{"email":"c1b0502f8bb10052cdda6ebe4099533dc4e32e66@umich.edu","name":"Raymond Cavalcante"},"message":"Merge branch 'master' into sumvis","distinct":false,"url":"https://api.github.com/repos/rcavalcante/annotatr/commits/81cc375056969a7fd0aa81f2243fb6cd6d46a120"},{"sha":"3d1224a0efc4ebc4aef2122dc4bc884976caaa3b","author":{"email":"c1b0502f8bb10052cdda6ebe4099533dc4e32e66@umich.edu","name":"Raymond Cavalcante"},"message":"Testing larger files in meta/\n\n* Also testing annotatr+dplyr versus ChIPpeakAnno (cpa).","distinct":false,"url":"https://api.github.com/repos/rcavalcante/annotatr/commits/3d1224a0efc4ebc4aef2122dc4bc884976caaa3b"},{"sha":"f229647efeb3357672da370b9cb197733929fe40","author":{"email":"c1b0502f8bb10052cdda6ebe4099533dc4e32e66@umich.edu","name":"Raymond Cavalcante"},"message":"Merge branch 'master' into sumvis","distinct":false,"url":"https://api.github.com/repos/rcavalcante/annotatr/commits/f229647efeb3357672da370b9cb197733929fe40"},{"sha":"58f0652631f50ec89cbacdf65f753cd370b8b9bc","author":{"email":"c1b0502f8bb10052cdda6ebe4099533dc4e32e66@umich.edu","name":"Raymond Cavalcante"},"message":"Merge branch 'master' into sumvis","distinct":false,"url":"https://api.github.com/repos/rcavalcante/annotatr/commits/58f0652631f50ec89cbacdf65f753cd370b8b9bc"},{"sha":"16ad3e05c79fa9d6df0c77dc8cde7d30636be6d3","author":{"email":"c1b0502f8bb10052cdda6ebe4099533dc4e32e66@umich.edu","name":"Raymond Cavalcante"},"message":"Merge branch 'sumvis'","distinct":false,"url":"https://api.github.com/repos/rcavalcante/annotatr/commits/16ad3e05c79fa9d6df0c77dc8cde7d30636be6d3"},{"sha":"b081a93d202c97fc68e60f6777fc7967ec7fbdd2","author":{"email":"c1b0502f8bb10052cdda6ebe4099533dc4e32e66@umich.edu","name":"Raymond Cavalcante"},"message":"Added simple benchmarking stats\n\n* Comparing annotatr+base to annotatr+plyr to chippeakanno across three\nreal files ranging from small to large.\n* We need to do more 'scientific' benchmarking.","distinct":false,"url":"https://api.github.com/repos/rcavalcante/annotatr/commits/b081a93d202c97fc68e60f6777fc7967ec7fbdd2"},{"sha":"9836d0d7486426ef9be3977a3779b62b3ed02243","author":{"email":"c1b0502f8bb10052cdda6ebe4099533dc4e32e66@umich.edu","name":"Raymond Cavalcante"},"message":"Added time from mint to unscientific benchmarking\n\n* annotatr+dplyr isn't that bad in comparison.","distinct":false,"url":"https://api.github.com/repos/rcavalcante/annotatr/commits/9836d0d7486426ef9be3977a3779b62b3ed02243"},{"sha":"998a82cee51ba82a88de77c339937851f566333f","author":{"email":"c1b0502f8bb10052cdda6ebe4099533dc4e32e66@umich.edu","name":"Raymond Cavalcante"},"message":"Refactor annotate_intersections()\n\n* Turn the lapply inside out. Two different lapplys depending on\nuse.score. This avoids repeated and unnecessary if/then statement in\nthe lapply.\n* Forgot dplyr::arrange.","distinct":false,"url":"https://api.github.com/repos/rcavalcante/annotatr/commits/998a82cee51ba82a88de77c339937851f566333f"},{"sha":"8ff1d2dea0d2d1451ef5cedc6f19a53faed69fdb","author":{"email":"7d5fff05b9a15e78058246dbf505badee74a09af@gmail.com","name":"Raymond Cavalcante"},"message":"Merge pull request #29 from rcavalcante/intersect\n\n* Turn the lapply inside out. Two different lapplys depending on use.score. This avoids repeated and unnecessary if/then statement in the lapply.\r\n* Forgot dplyr::arrange.","distinct":false,"url":"https://api.github.com/repos/rcavalcante/annotatr/commits/8ff1d2dea0d2d1451ef5cedc6f19a53faed69fdb"},{"sha":"ea366ea67adba122b1ee0ae5756f0f543ef82e94","author":{"email":"c1b0502f8bb10052cdda6ebe4099533dc4e32e66@umich.edu","name":"Raymond Cavalcante"},"message":"Merge branch 'master' into read","distinct":true,"url":"https://api.github.com/repos/rcavalcante/annotatr/commits/ea366ea67adba122b1ee0ae5756f0f543ef82e94"}]}