{"action":"created","issue":{"url":"https://api.github.com/repos/idaholab/moose/issues/5458","labels_url":"https://api.github.com/repos/idaholab/moose/issues/5458/labels{/name}","comments_url":"https://api.github.com/repos/idaholab/moose/issues/5458/comments","events_url":"https://api.github.com/repos/idaholab/moose/issues/5458/events","html_url":"https://github.com/idaholab/moose/pull/5458","id":97784410,"number":5458,"title":"Correct error running moose tests (python re.search pattern)","user":{"login":"garvct","id":6304999,"avatar_url":"https://avatars.githubusercontent.com/u/6304999?v=3","gravatar_id":"","url":"https://api.github.com/users/garvct","html_url":"https://github.com/garvct","followers_url":"https://api.github.com/users/garvct/followers","following_url":"https://api.github.com/users/garvct/following{/other_user}","gists_url":"https://api.github.com/users/garvct/gists{/gist_id}","starred_url":"https://api.github.com/users/garvct/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/garvct/subscriptions","organizations_url":"https://api.github.com/users/garvct/orgs","repos_url":"https://api.github.com/users/garvct/repos","events_url":"https://api.github.com/users/garvct/events{/privacy}","received_events_url":"https://api.github.com/users/garvct/received_events","type":"User","site_admin":false},"labels":[],"state":"open","locked":false,"assignee":null,"milestone":null,"comments":10,"created_at":"2015-07-28T19:34:07Z","updated_at":"2015-07-28T22:13:33Z","closed_at":null,"pull_request":{"url":"https://api.github.com/repos/idaholab/moose/pulls/5458","html_url":"https://github.com/idaholab/moose/pull/5458","diff_url":"https://github.com/idaholab/moose/pull/5458.diff","patch_url":"https://github.com/idaholab/moose/pull/5458.patch"},"body":"I get the following error running the moose tests.\r\n\r\nkernels/coupled_kernel_value.test_coupled_kernel_value_test............................................... OK\r\nTraceback (most recent call last):\r\n  File \"./run_tests\", line 24, in <module>\r\n    TestHarness.buildAndRun(sys.argv, app_name, MOOSE_DIR)\r\n  File \"/home/garvct/trunk/falcon-moose-dev-5.7.0-gmvolf-5.5.7/moose/python/TestHarness/TestHarness.py\", line 34, in buildAndRun\r\n    harness.findAndRunTests()\r\n  File \"/home/garvct/trunk/falcon-moose-dev-5.7.0-gmvolf-5.5.7/moose/python/TestHarness/TestHarness.py\", line 195, in findAndRunTests\r\n    self.runner.run(tester, command)\r\n  File \"/home/garvct/trunk/falcon-moose-dev-5.7.0-gmvolf-5.5.7/moose/python/TestHarness/RunParallel.py\", line 69, in run\r\n    self.spinwait()\r\n  File \"/home/garvct/trunk/falcon-moose-dev-5.7.0-gmvolf-5.5.7/moose/python/TestHarness/RunParallel.py\", line 159, in spinwait\r\n    self.returnToTestHarness(job_index)\r\n  File \"/home/garvct/trunk/falcon-moose-dev-5.7.0-gmvolf-5.5.7/moose/python/TestHarness/RunParallel.py\", line 135, in returnToTestHarness\r\n    if not self.harness.testOutputAndFinish(tester, p.returncode, output, time, clock()):\r\n  File \"/home/garvct/trunk/falcon-moose-dev-5.7.0-gmvolf-5.5.7/moose/python/TestHarness/TestHarness.py\", line 340, in testOutputAndFinish\r\n    (reason, output) = tester.processResults(self.moose_dir, retcode, self.options, output)\r\n  File \"/home/garvct/trunk/falcon-moose-dev-5.7.0-gmvolf-5.5.7/moose/python/TestHarness/testers/PetscJacobianTester.py\", line 28, in processResults\r\n    if float(m.group(1)) < float(self.specs['ratio_tol']) and float(m.group(2)) < float(self.specs['difference_tol']):\r\nValueError: invalid literal for float(): 1.00423e-16,\r\n\r\nThe problem is\r\n\r\n   f = float('1.00423e-16,')\r\nTraceback (most recent call last):\r\n  File \"<stdin>\", line 1, in <module>\r\nValueError: invalid literal for float(): 1.00423e-16,\r\n\r\nThe output has the line\r\n\r\nNorm of matrix ratio 1.00423e-16, difference 4.29988e-16 (user-defined state)\r\n\r\nSee line 26 (moose/python/TestHarness/testers/PetscJacobianTester.py)\r\n\r\nCurrently is\r\n\r\nm = re.search(\"Norm of matrix ratio (\\S+) difference (\\S+) \\(user-defined state\\)\", output, re.MULTILINE | re.DOTALL);\r\n\r\nShould it be?\r\n\r\nm = re.search(\"Norm of matrix ratio (\\S+), difference (\\S+) \\(user-defined state\\)\", output, re.MULTILINE | re.DOTALL);\r\n\r\nThanks,\r\nCormac."},"comment":{"url":"https://api.github.com/repos/idaholab/moose/issues/comments/125768187","html_url":"https://github.com/idaholab/moose/pull/5458#issuecomment-125768187","issue_url":"https://api.github.com/repos/idaholab/moose/issues/5458","id":125768187,"user":{"login":"moosebuild","id":6702118,"avatar_url":"https://avatars.githubusercontent.com/u/6702118?v=3","gravatar_id":"","url":"https://api.github.com/users/moosebuild","html_url":"https://github.com/moosebuild","followers_url":"https://api.github.com/users/moosebuild/followers","following_url":"https://api.github.com/users/moosebuild/following{/other_user}","gists_url":"https://api.github.com/users/moosebuild/gists{/gist_id}","starred_url":"https://api.github.com/users/moosebuild/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/moosebuild/subscriptions","organizations_url":"https://api.github.com/users/moosebuild/orgs","repos_url":"https://api.github.com/users/moosebuild/repos","events_url":"https://api.github.com/users/moosebuild/events{/privacy}","received_events_url":"https://api.github.com/users/moosebuild/received_events","type":"User","site_admin":false},"created_at":"2015-07-28T22:13:33Z","updated_at":"2015-07-28T22:13:33Z","body":"Results of testing 8ea2933fb1ad91ce5ace1ef2c884caa26674f8bf using moose_PR_test_dbg recipe:\n\nPassed on: linux-gnu\n\nView the results here: https://www.moosebuild.org/view_job/20498"}}