{"action":"created","issue":{"url":"https://api.github.com/repos/BVLC/caffe/issues/1959","labels_url":"https://api.github.com/repos/BVLC/caffe/issues/1959/labels{/name}","comments_url":"https://api.github.com/repos/BVLC/caffe/issues/1959/comments","events_url":"https://api.github.com/repos/BVLC/caffe/issues/1959/events","html_url":"https://github.com/BVLC/caffe/issues/1959","id":58851986,"number":1959,"title":"***HDF5 library version mismatched error*** ...Library 1.8.14 but header 1.8.13 Mac OSX 10.10","user":{"login":"asampat3090","id":873127,"avatar_url":"https://avatars.githubusercontent.com/u/873127?v=3","gravatar_id":"","url":"https://api.github.com/users/asampat3090","html_url":"https://github.com/asampat3090","followers_url":"https://api.github.com/users/asampat3090/followers","following_url":"https://api.github.com/users/asampat3090/following{/other_user}","gists_url":"https://api.github.com/users/asampat3090/gists{/gist_id}","starred_url":"https://api.github.com/users/asampat3090/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/asampat3090/subscriptions","organizations_url":"https://api.github.com/users/asampat3090/orgs","repos_url":"https://api.github.com/users/asampat3090/repos","events_url":"https://api.github.com/users/asampat3090/events{/privacy}","received_events_url":"https://api.github.com/users/asampat3090/received_events","type":"User","site_admin":false},"labels":[],"state":"open","locked":false,"assignee":null,"milestone":null,"comments":2,"created_at":"2015-02-25T05:18:56Z","updated_at":"2015-03-14T12:15:41Z","closed_at":null,"body":"I get the following error when I run \"make runtest\".  I can't figure out how to change my library using homebrew so I'd like to change the header to accept HDF5 1.8.14, but I can't figure out how. Anyone else have this issue? Full error here: https://gist.github.com/asampat3090/36caf62fc6a43d48fc47\r\n\r\nAs a side note I'm trying to run caffe in CPU-only mode (I don't have an nVidia graphics card on my laptop)."},"comment":{"url":"https://api.github.com/repos/BVLC/caffe/issues/comments/80398494","html_url":"https://github.com/BVLC/caffe/issues/1959#issuecomment-80398494","issue_url":"https://api.github.com/repos/BVLC/caffe/issues/1959","id":80398494,"user":{"login":"greatgao","id":9878654,"avatar_url":"https://avatars.githubusercontent.com/u/9878654?v=3","gravatar_id":"","url":"https://api.github.com/users/greatgao","html_url":"https://github.com/greatgao","followers_url":"https://api.github.com/users/greatgao/followers","following_url":"https://api.github.com/users/greatgao/following{/other_user}","gists_url":"https://api.github.com/users/greatgao/gists{/gist_id}","starred_url":"https://api.github.com/users/greatgao/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/greatgao/subscriptions","organizations_url":"https://api.github.com/users/greatgao/orgs","repos_url":"https://api.github.com/users/greatgao/repos","events_url":"https://api.github.com/users/greatgao/events{/privacy}","received_events_url":"https://api.github.com/users/greatgao/received_events","type":"User","site_admin":false},"created_at":"2015-03-14T12:15:41Z","updated_at":"2015-03-14T12:15:41Z","body":"I have the same problem like it.And I checked the Makefile.config again and again.It seems no wrong setting.The file as the following:\r\n###########*********************************************************************************\r\n## Refer to http://caffe.berkeleyvision.org/installation.html\r\n# Contributions simplifying and improving our build system are welcome!\r\n# cuDNN acceleration switch (uncomment to build with cuDNN).\r\n# USE_CUDNN := 1\r\n# CPU-only switch (uncomment to build without GPU support).\r\nCPU_ONLY := 1\r\n# To customize your choice of compiler, uncomment and set the following.\r\n# N.B. the default for Linux is g++ and the default for OSX is clang++\r\nCUSTOM_CXX := clang++\r\n# CUDA directory contains bin/ and lib/ directories that we need.\r\nCUDA_DIR := /usr/local/cuda\r\n# On Ubuntu 14.04, if cuda tools are installed via\r\n# \"sudo apt-get install nvidia-cuda-toolkit\" then use this instead:\r\n# CUDA_DIR := /usr\r\n\r\n# CUDA architecture setting: going with all of them.\r\n# For CUDA < 6.0, comment the *_50 lines for compatibility.\r\nCUDA_ARCH := -gencode arch=compute_20,code=sm_20 \\\r\n\t\t-gencode arch=compute_20,code=sm_21 \\\r\n\t\t-gencode arch=compute_30,code=sm_30 \\\r\n\t\t-gencode arch=compute_35,code=sm_35 \\\r\n\t\t-gencode arch=compute_50,code=sm_50 \\\r\n\t\t-gencode arch=compute_50,code=compute_50\r\n\r\n# BLAS choice:\r\n# atlas for ATLAS (default)\r\n# mkl for MKL\r\n# open for OpenBlas\r\nBLAS := atlas\r\n# Custom (MKL/ATLAS/OpenBLAS) include and lib directories.\r\n# Leave commented to accept the defaults for your choice of BLAS\r\n# (which should work)!\r\n# BLAS_INCLUDE := /Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX10.10.sdk/System/Library/Frameworks/Accelerate.framework/Versions/Current/Frameworks/vecLib.framework/Headers/\r\n#BLAS_LIB := \r\n# This is required only if you will compile the matlab interface.\r\n# MATLAB directory should contain the mex binary in /bin.\r\n# MATLAB_DIR := /usr/local\r\n# MATLAB_DIR := /Applications/MATLAB_R2012b.app\r\n\r\n# NOTE: this is required only if you will compile the python interface.\r\n# We need to be able to find Python.h and numpy/arrayobject.h.\r\n#PYTHON_INCLUDE := /usr/include/python2.7 \\\r\n#\t\t/usr/lib/python2.7/dist-packages/numpy/core/include\r\n###########*********************************************************************************\r\n# Anaconda Python distribution is quite popular. Include path:\r\n# Verify anaconda location, sometimes it's in root.\r\nANACONDA_HOME := $(HOME)/anaconda\r\nPYTHON_INCLUDE := $(ANACONDA_HOME)/include \\\r\n\t\t $(ANACONDA_HOME)/include/python2.7 \\\r\n\t\t $(ANACONDA_HOME)/lib/python2.7/site-packages/numpy/core/include \\\r\n# We need to be able to find libpythonX.X.so or .dylib.\r\n#PYTHON_LIB := /usr/lib\r\n PYTHON_LIB := $(ANACONDA_HOME)/lib\r\n\r\n# Uncomment to support layers written in Python (will link against Python libs)\r\n# WITH_PYTHON_LAYER := 1\r\n\r\n# Whatever else you find you need goes here.\r\nINCLUDE_DIRS := $(PYTHON_INCLUDE) /usr/local/include\r\nLIBRARY_DIRS := $(PYTHON_LIB) /usr/local/lib /usr/lib\r\n###########*********************************************************************************\r\n# Uncomment to use `pkg-config` to specify OpenCV library paths.\r\n# (Usually not necessary -- OpenCV libraries are normally installed in one of the above $LIBRARY_DIRS.)\r\n#USE_PKG_CONFIG := 1\r\n\r\nBUILD_DIR := build\r\nDISTRIBUTE_DIR := distribute\r\n\r\n# Uncomment for debugging. Does not work on OSX due to https://github.com/BVLC/caffe/issues/171\r\n#DEBUG := 1\r\n# The ID of the GPU that 'make runtest' will use to run unit tests.\r\nTEST_GPUID := 0\r\n# enable pretty build (comment to see full commands)\r\nQ ?= @"}}