{"action":"created","issue":{"url":"https://api.github.com/repos/LUMC/kPAL/issues/2","labels_url":"https://api.github.com/repos/LUMC/kPAL/issues/2/labels{/name}","comments_url":"https://api.github.com/repos/LUMC/kPAL/issues/2/comments","events_url":"https://api.github.com/repos/LUMC/kPAL/issues/2/events","html_url":"https://github.com/LUMC/kPAL/issues/2","id":55178241,"number":2,"title":"invalid ProfileFileType","user":{"login":"jfjlaros","id":7374138,"avatar_url":"https://avatars.githubusercontent.com/u/7374138?v=3","gravatar_id":"","url":"https://api.github.com/users/jfjlaros","html_url":"https://github.com/jfjlaros","followers_url":"https://api.github.com/users/jfjlaros/followers","following_url":"https://api.github.com/users/jfjlaros/following{/other_user}","gists_url":"https://api.github.com/users/jfjlaros/gists{/gist_id}","starred_url":"https://api.github.com/users/jfjlaros/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/jfjlaros/subscriptions","organizations_url":"https://api.github.com/users/jfjlaros/orgs","repos_url":"https://api.github.com/users/jfjlaros/repos","events_url":"https://api.github.com/users/jfjlaros/events{/privacy}","received_events_url":"https://api.github.com/users/jfjlaros/received_events","type":"User","site_admin":false},"labels":[],"state":"open","locked":false,"assignee":null,"milestone":null,"comments":3,"created_at":"2015-01-22T16:55:07Z","updated_at":"2015-01-30T12:22:46Z","closed_at":null,"body":"I am trying to use kPal to assess the quality of my sequence libraries, but have encountered some issues.  When IT installed kPal on our server and tried to run the tutorial, there was an issue with the first step (i.e. running kpal count -k 8 *_1.fa reads_1.k8), which was:\r\n\r\nkpal count: error: argument OUTPUT: invalid ProfileFileType(w) value: 'reads1.k8'"},"comment":{"url":"https://api.github.com/repos/LUMC/kPAL/issues/comments/72193380","html_url":"https://github.com/LUMC/kPAL/issues/2#issuecomment-72193380","issue_url":"https://api.github.com/repos/LUMC/kPAL/issues/2","id":72193380,"user":{"login":"martijnvermaat","id":623509,"avatar_url":"https://avatars.githubusercontent.com/u/623509?v=3","gravatar_id":"","url":"https://api.github.com/users/martijnvermaat","html_url":"https://github.com/martijnvermaat","followers_url":"https://api.github.com/users/martijnvermaat/followers","following_url":"https://api.github.com/users/martijnvermaat/following{/other_user}","gists_url":"https://api.github.com/users/martijnvermaat/gists{/gist_id}","starred_url":"https://api.github.com/users/martijnvermaat/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/martijnvermaat/subscriptions","organizations_url":"https://api.github.com/users/martijnvermaat/orgs","repos_url":"https://api.github.com/users/martijnvermaat/repos","events_url":"https://api.github.com/users/martijnvermaat/events{/privacy}","received_events_url":"https://api.github.com/users/martijnvermaat/received_events","type":"User","site_admin":false},"created_at":"2015-01-30T12:22:46Z","updated_at":"2015-01-30T12:22:46Z","body":"Thanks for the report @stephyk \r\n\r\nIt looks like the output file you define, `reads_1.k8`, already exists (it should not). You can try again by specifying a non-existing output file.\r\n\r\nkPAL *should* give a more descriptive error message for this situation though. But I can't reproduce this, so I'm still not sure what's going on exactly."}}