{"push_id":716251042,"size":5,"distinct_size":1,"ref":"refs/heads/master","head":"85eeab89b3ff0982ca7a324ed2ae159534001006","before":"508ae19f2d41f5a3dbd003a304c6dba5594b8abd","commits":[{"sha":"c9c19ab2aabd5f19cd73e2c328448da40be9257d","author":{"email":"b26a3cb24e8896ea0c84c7ebfcc36ef1f8500880@hotmail.ca","name":"Matt Smart"},"message":"Change folders and alternate state machine framework","distinct":false,"url":"https://api.github.com/repos/Salahub/uwaterloo-igem-2015/commits/c9c19ab2aabd5f19cd73e2c328448da40be9257d"},{"sha":"9010a4c25f638b847b794ac0615f000fc6b13b17","author":{"email":"b26a3cb24e8896ea0c84c7ebfcc36ef1f8500880@hotmail.ca","name":"mattsmart"},"message":"Merge pull request #20 from mattsmart/cas9_cuts\n\nChange folders and alternate state machine framework","distinct":false,"url":"https://api.github.com/repos/Salahub/uwaterloo-igem-2015/commits/9010a4c25f638b847b794ac0615f000fc6b13b17"},{"sha":"c2d747fcc483304add344f1a64a7e21ecd1395a6","author":{"email":"6b189dca8df3c928339a71ab97b3a86c04ccb118@gmail.com","name":"Salahub"},"message":"Merge branch 'master' of https://github.com/igem-waterloo/uwaterloo-igem-2015 into Chris'_Workspace","distinct":false,"url":"https://api.github.com/repos/Salahub/uwaterloo-igem-2015/commits/c2d747fcc483304add344f1a64a7e21ecd1395a6"},{"sha":"af91738f5026010667c420c8a37946e6ca7b0145","author":{"email":"6b189dca8df3c928339a71ab97b3a86c04ccb118@gmail.com","name":"Salahub"},"message":"The cut probability function. I bring particular attention to the concentration integration function. I generating this function using multiple regression in R on data from a paper which is referred to in the code. While the regression had a very good fit to the data (R^2 = 0.88) it clearly breaks down if it is extrapolated. I don't know what concentrations we are dealing with in the plants, so hopefully that is not a problem. As well, for the time component I assumed a simple uniform probability of a cut happening within the cut time scale (~1-3 min according to the MIT info) and so simply took a ratio of dt/60s.","distinct":false,"url":"https://api.github.com/repos/Salahub/uwaterloo-igem-2015/commits/af91738f5026010667c420c8a37946e6ca7b0145"},{"sha":"85eeab89b3ff0982ca7a324ed2ae159534001006","author":{"email":"6b189dca8df3c928339a71ab97b3a86c04ccb118@gmail.com","name":"Salahub"},"message":"Merge pull request #1 from Salahub/Chris'_Workspace\n\nChris' workspace","distinct":true,"url":"https://api.github.com/repos/Salahub/uwaterloo-igem-2015/commits/85eeab89b3ff0982ca7a324ed2ae159534001006"}]}