{"action":"created","issue":{"url":"https://api.github.com/repos/geneontology/amigo/issues/240","labels_url":"https://api.github.com/repos/geneontology/amigo/issues/240/labels{/name}","comments_url":"https://api.github.com/repos/geneontology/amigo/issues/240/comments","events_url":"https://api.github.com/repos/geneontology/amigo/issues/240/events","html_url":"https://github.com/geneontology/amigo/issues/240","id":104267763,"number":240,"title":"Name missing for beta catenin (and other human proteins)?","user":{"login":"cmungall","id":50745,"avatar_url":"https://avatars.githubusercontent.com/u/50745?v=3","gravatar_id":"","url":"https://api.github.com/users/cmungall","html_url":"https://github.com/cmungall","followers_url":"https://api.github.com/users/cmungall/followers","following_url":"https://api.github.com/users/cmungall/following{/other_user}","gists_url":"https://api.github.com/users/cmungall/gists{/gist_id}","starred_url":"https://api.github.com/users/cmungall/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/cmungall/subscriptions","organizations_url":"https://api.github.com/users/cmungall/orgs","repos_url":"https://api.github.com/users/cmungall/repos","events_url":"https://api.github.com/users/cmungall/events{/privacy}","received_events_url":"https://api.github.com/users/cmungall/received_events","type":"User","site_admin":false},"labels":[{"url":"https://api.github.com/repos/geneontology/amigo/labels/bug%20(B:%20affects%20usability)","name":"bug (B: affects usability)","color":"eb6420"}],"state":"closed","locked":false,"assignee":{"login":"hdietze","id":5142396,"avatar_url":"https://avatars.githubusercontent.com/u/5142396?v=3","gravatar_id":"","url":"https://api.github.com/users/hdietze","html_url":"https://github.com/hdietze","followers_url":"https://api.github.com/users/hdietze/followers","following_url":"https://api.github.com/users/hdietze/following{/other_user}","gists_url":"https://api.github.com/users/hdietze/gists{/gist_id}","starred_url":"https://api.github.com/users/hdietze/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/hdietze/subscriptions","organizations_url":"https://api.github.com/users/hdietze/orgs","repos_url":"https://api.github.com/users/hdietze/repos","events_url":"https://api.github.com/users/hdietze/events{/privacy}","received_events_url":"https://api.github.com/users/hdietze/received_events","type":"User","site_admin":false},"milestone":{"url":"https://api.github.com/repos/geneontology/amigo/milestones/9","html_url":"https://github.com/geneontology/amigo/milestones/2.4","labels_url":"https://api.github.com/repos/geneontology/amigo/milestones/9/labels","id":687392,"number":9,"title":"2.4","description":"Work on finishing beta features and new features.","creator":{"login":"kltm","id":2687900,"avatar_url":"https://avatars.githubusercontent.com/u/2687900?v=3","gravatar_id":"","url":"https://api.github.com/users/kltm","html_url":"https://github.com/kltm","followers_url":"https://api.github.com/users/kltm/followers","following_url":"https://api.github.com/users/kltm/following{/other_user}","gists_url":"https://api.github.com/users/kltm/gists{/gist_id}","starred_url":"https://api.github.com/users/kltm/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/kltm/subscriptions","organizations_url":"https://api.github.com/users/kltm/orgs","repos_url":"https://api.github.com/users/kltm/repos","events_url":"https://api.github.com/users/kltm/events{/privacy}","received_events_url":"https://api.github.com/users/kltm/received_events","type":"User","site_admin":false},"open_issues":46,"closed_issues":6,"state":"open","created_at":"2014-06-10T21:54:16Z","updated_at":"2015-09-01T14:53:07Z","due_on":null,"closed_at":null},"comments":4,"created_at":"2015-09-01T13:33:22Z","updated_at":"2015-09-01T14:53:07Z","closed_at":"2015-09-01T14:53:07Z","body":"http://amigo.geneontology.org/amigo/gene_product/UniProtKB:P35222\r\n\r\n```\r\nName(s)    (n/a)\r\n```\r\n\r\nThis is not a problem with the data\r\n```\r\n$ gzip -dc gene_association.goa_human.gz  | grep '^UniProtKB\\tP35222' | cut -f1-3,10 | head\r\nUniProtKB       P35222  CTNNB1  Catenin beta-1\r\nUniProtKB       P35222  CTNNB1  Catenin beta-1\r\nUniProtKB       P35222  CTNNB1  Catenin beta-1\r\nUniProtKB       P35222  CTNNB1  Catenin beta-1\r\nUniProtKB       P35222  CTNNB1  Catenin beta-1\r\nUniProtKB       P35222  CTNNB1  Catenin beta-1\r\nUniProtKB       P35222  CTNNB1  Catenin beta-1\r\nUniProtKB       P35222  CTNNB1  Catenin beta-1\r\nUniProtKB       P35222  CTNNB1  Catenin beta-1\r\nUniProtKB       P35222  CTNNB1  Catenin beta-1\r\n```\r\n\r\n`Catenin beta-1` should be in the name field. As well as a display issue, this is a search issue, it's impossible to find this gene product unless you have memorized the symbol.\r\n\r\nThis is *partly* due to the fact uniprot doesn't include useful symbols:\r\n\r\n```\r\nUniProtKB       P35222  CTNNB1  Catenin beta-1  CTNB1_HUMAN|CTNNB1|CTNNB|OK/SW-cl.35|PRO2286\r\nUniProtKB       P35222  CTNNB1  Catenin beta-1  CTNB1_HUMAN|CTNNB1|CTNNB|OK/SW-cl.35|PRO2286\r\nUniProtKB       P35222  CTNNB1  Catenin beta-1  CTNB1_HUMAN|CTNNB1|CTNNB|OK/SW-cl.35|PRO2286\r\nUniProtKB       P35222  CTNNB1  Catenin beta-1  CTNB1_HUMAN|CTNNB1|CTNNB|OK/SW-cl.35|PRO2286\r\nUniProtKB       P35222  CTNNB1  Catenin beta-1  CTNB1_HUMAN|CTNNB1|CTNNB|OK/SW-cl.35|PRO2286\r\nUniProtKB       P35222  CTNNB1  Catenin beta-1  CTNB1_HUMAN|CTNNB1|CTNNB|OK/SW-cl.35|PRO2286\r\nUniProtKB       P35222  CTNNB1  Catenin beta-1  CTNB1_HUMAN|CTNNB1|CTNNB|OK/SW-cl.35|PRO2286\r\nUniProtKB       P35222  CTNNB1  Catenin beta-1  CTNB1_HUMAN|CTNNB1|CTNNB|OK/SW-cl.35|PRO2286\r\nUniProtKB       P35222  CTNNB1  Catenin beta-1  CTNB1_HUMAN|CTNNB1|CTNNB|OK/SW-cl.35|PRO2286\r\nUniProtKB       P35222  CTNNB1  Catenin beta-1  CTNB1_HUMAN|CTNNB1|CTNNB|OK/SW-cl.35|PRO2286\r\n```\r\n\r\nMost likely golr loader issue but we need to keep a ticket here"},"comment":{"url":"https://api.github.com/repos/geneontology/amigo/issues/comments/136750181","html_url":"https://github.com/geneontology/amigo/issues/240#issuecomment-136750181","issue_url":"https://api.github.com/repos/geneontology/amigo/issues/240","id":136750181,"user":{"login":"kltm","id":2687900,"avatar_url":"https://avatars.githubusercontent.com/u/2687900?v=3","gravatar_id":"","url":"https://api.github.com/users/kltm","html_url":"https://github.com/kltm","followers_url":"https://api.github.com/users/kltm/followers","following_url":"https://api.github.com/users/kltm/following{/other_user}","gists_url":"https://api.github.com/users/kltm/gists{/gist_id}","starred_url":"https://api.github.com/users/kltm/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/kltm/subscriptions","organizations_url":"https://api.github.com/users/kltm/orgs","repos_url":"https://api.github.com/users/kltm/repos","events_url":"https://api.github.com/users/kltm/events{/privacy}","received_events_url":"https://api.github.com/users/kltm/received_events","type":"User","site_admin":false},"created_at":"2015-09-01T14:53:07Z","updated_at":"2015-09-01T14:53:07Z","body":"Just to confirm this is at least loader or upstream, from AmiGO:\r\n```json\r\n      {\r\n        \"document_category\":\"bioentity\",\r\n        \"id\":\"UniProtKB:P35222\",\r\n        \"bioentity\":\"UniProtKB:P35222\",\r\n        \"bioentity_internal_id\":\"P35222\",\r\n        \"bioentity_label\":\"CTNNB1\",\r\n        \"bioentity_name\":\"\",\r\n        \"source\":\"UniProtKB\",\r\n        \"type\":\"protein\",\r\n        \"taxon\":\"NCBITaxon:9606\",\r\n        \"taxon_label\":\"Homo sapiens\",\r\n        ...\r\n}\r\n```\r\n\r\nOkay, an easy to implement hotfix then."}}