{"action":"created","issue":{"url":"https://api.github.com/repos/idaholab/moose/issues/4852","labels_url":"https://api.github.com/repos/idaholab/moose/issues/4852/labels{/name}","comments_url":"https://api.github.com/repos/idaholab/moose/issues/4852/comments","events_url":"https://api.github.com/repos/idaholab/moose/issues/4852/events","html_url":"https://github.com/idaholab/moose/issues/4852","id":64107718,"number":4852,"title":"CUBIT cmd causes mpi abort at MooseArray.h","user":{"login":"mangerij","id":7597716,"avatar_url":"https://avatars.githubusercontent.com/u/7597716?v=3","gravatar_id":"","url":"https://api.github.com/users/mangerij","html_url":"https://github.com/mangerij","followers_url":"https://api.github.com/users/mangerij/followers","following_url":"https://api.github.com/users/mangerij/following{/other_user}","gists_url":"https://api.github.com/users/mangerij/gists{/gist_id}","starred_url":"https://api.github.com/users/mangerij/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/mangerij/subscriptions","organizations_url":"https://api.github.com/users/mangerij/orgs","repos_url":"https://api.github.com/users/mangerij/repos","events_url":"https://api.github.com/users/mangerij/events{/privacy}","received_events_url":"https://api.github.com/users/mangerij/received_events","type":"User","site_admin":false},"labels":[],"state":"open","locked":false,"assignee":null,"milestone":null,"comments":10,"created_at":"2015-03-24T21:43:43Z","updated_at":"2015-03-25T21:15:58Z","closed_at":null,"body":"Make any multi-block mesh in CUBIT, mesh it with tets, and then use 'refine volume # depth #' once, save the mesh and attempt to run this with more than one mpi process and you will get a seg fault 11 that points to this:\r\n\r\n```\r\nAssertion `i < _size' failed\r\nAccess out of bounds in MooseArray (i: 0 size: 0)\r\nat /home/john/projects/moose/framework/include/utils/MooseArray.h, line 289\r\n[12] /home/john/projects/moose/framework/include/utils/MooseArray.h, line 289, compiled Mar 24 2015 at 13:52:44\r\n```\r\n\r\nInterestingly enough, this mesh can be computing on for one mpi process. Not entirely sure how to upload the mesh file in question but I'm essentially using the following simple .jou commands:\r\n```\r\nset node constraint on\r\ncreate brick width 100 height 100 length 100\r\ncreate sphere radius 15\r\nsubtract volume 2 from volume 1\r\ncreate sphere radius 15\r\nmerge surface all with surface all\r\ncompress all\r\nvolume 1 size 15\r\nvolume 1 scheme tetmesh\r\nmesh volume 1\r\nvolume 2 size 15\r\nvolume 2 scheme Tetmesh\r\nmesh volume 2\r\nrefine volume 2 depth 2\r\nsideset 1 surface 1\r\nsideset 2 surface 2\r\nsideset 3 surface 3\r\nsideset 4 surface 4\r\nsideset 5 surface 5\r\nsideset 6 surface 6\r\nsideset 7 surface 7\r\nblock 1 volume 1\r\nblock 2 volume 2\r\nblock all element type tetra4\r\nset large exodus file off\r\nexport Genesis \"./sphere_fine_medium_coarse_exodus.e\" dimension 3 block all overwrite\r\n```\r\n\r\nNote that removing the line refine volume 2 depth 2 allows this mesh file to be run with 16 mpi processes. heal analyze also shows 100% quality for the mesh. No negative jacobians, ect.\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n"},"comment":{"url":"https://api.github.com/repos/idaholab/moose/issues/comments/86220621","html_url":"https://github.com/idaholab/moose/issues/4852#issuecomment-86220621","issue_url":"https://api.github.com/repos/idaholab/moose/issues/4852","id":86220621,"user":{"login":"mangerij","id":7597716,"avatar_url":"https://avatars.githubusercontent.com/u/7597716?v=3","gravatar_id":"","url":"https://api.github.com/users/mangerij","html_url":"https://github.com/mangerij","followers_url":"https://api.github.com/users/mangerij/followers","following_url":"https://api.github.com/users/mangerij/following{/other_user}","gists_url":"https://api.github.com/users/mangerij/gists{/gist_id}","starred_url":"https://api.github.com/users/mangerij/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/mangerij/subscriptions","organizations_url":"https://api.github.com/users/mangerij/orgs","repos_url":"https://api.github.com/users/mangerij/repos","events_url":"https://api.github.com/users/mangerij/events{/privacy}","received_events_url":"https://api.github.com/users/mangerij/received_events","type":"User","site_admin":false},"created_at":"2015-03-25T21:15:58Z","updated_at":"2015-03-25T21:15:58Z","body":"Yup. I just checked again just to be safe. No stack."}}