{"action":"closed","issue":{"url":"https://api.github.com/repos/kwikteam/phy/issues/380","labels_url":"https://api.github.com/repos/kwikteam/phy/issues/380/labels{/name}","comments_url":"https://api.github.com/repos/kwikteam/phy/issues/380/comments","events_url":"https://api.github.com/repos/kwikteam/phy/issues/380/events","html_url":"https://github.com/kwikteam/phy/issues/380","id":90088921,"number":380,"title":"h5py access error","user":{"login":"xigumalu","id":12951038,"avatar_url":"https://avatars.githubusercontent.com/u/12951038?v=3","gravatar_id":"","url":"https://api.github.com/users/xigumalu","html_url":"https://github.com/xigumalu","followers_url":"https://api.github.com/users/xigumalu/followers","following_url":"https://api.github.com/users/xigumalu/following{/other_user}","gists_url":"https://api.github.com/users/xigumalu/gists{/gist_id}","starred_url":"https://api.github.com/users/xigumalu/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/xigumalu/subscriptions","organizations_url":"https://api.github.com/users/xigumalu/orgs","repos_url":"https://api.github.com/users/xigumalu/repos","events_url":"https://api.github.com/users/xigumalu/events{/privacy}","received_events_url":"https://api.github.com/users/xigumalu/received_events","type":"User","site_admin":false},"labels":[{"url":"https://api.github.com/repos/kwikteam/phy/labels/bug","name":"bug","color":"fc2929"},{"url":"https://api.github.com/repos/kwikteam/phy/labels/in%20progress","name":"in progress","color":"ededed"}],"state":"closed","locked":false,"assignee":{"login":"nippoo","id":1363114,"avatar_url":"https://avatars.githubusercontent.com/u/1363114?v=3","gravatar_id":"","url":"https://api.github.com/users/nippoo","html_url":"https://github.com/nippoo","followers_url":"https://api.github.com/users/nippoo/followers","following_url":"https://api.github.com/users/nippoo/following{/other_user}","gists_url":"https://api.github.com/users/nippoo/gists{/gist_id}","starred_url":"https://api.github.com/users/nippoo/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/nippoo/subscriptions","organizations_url":"https://api.github.com/users/nippoo/orgs","repos_url":"https://api.github.com/users/nippoo/repos","events_url":"https://api.github.com/users/nippoo/events{/privacy}","received_events_url":"https://api.github.com/users/nippoo/received_events","type":"User","site_admin":false},"milestone":null,"comments":2,"created_at":"2015-06-22T12:46:40Z","updated_at":"2015-06-22T16:22:43Z","closed_at":"2015-06-22T16:22:43Z","body":"Introduced in https://github.com/kwikteam/phy/commit/262dddba0e310e0b88a30b3d3e2f2f51e7bb31f4 - on opening of any file.\r\n\r\n```\r\nLoading J:\\Electrophys\\SS026\\20150203_all.kwik...\r\nTraceback (most recent call last):\r\n  File \"c:\\Program Files\\KlustaViewa\\WinPython-64bit-2.7.6.4\\python-2.7.6.amd64\\\r\nScripts\\phy-script.py\", line 9, in <module>\r\n    load_entry_point('phy==0.2.0.dev0', 'console_scripts', 'phy')()\r\n  File \"c:\\storage\\workspaces\\phy\\phy\\scripts\\phy_script.py\", line 90, in main\r\n    run(kwik_path, interactive=interactive)\r\n  File \"c:\\storage\\workspaces\\phy\\phy\\scripts\\phy_script.py\", line 106, in run\r\n    session = Session(kwik_path)\r\n  File \"c:\\storage\\workspaces\\phy\\phy\\cluster\\session.py\", line 72, in __init__\r\n    gui_classes=self._gui_classes,\r\n  File \"c:\\storage\\workspaces\\phy\\phy\\gui\\base.py\", line 605, in __init__\r\n    self.open(path, model=model)\r\n  File \"c:\\storage\\workspaces\\phy\\phy\\cluster\\session.py\", line 106, in open\r\n    return super(Session, self).open(model=model, path=kwik_path)\r\n  File \"c:\\storage\\workspaces\\phy\\phy\\gui\\base.py\", line 651, in open\r\n    model = self._create_model(path)\r\n  File \"c:\\storage\\workspaces\\phy\\phy\\cluster\\session.py\", line 91, in _create_m\r\nodel\r\n    model = KwikModel(path)\r\n  File \"c:\\storage\\workspaces\\phy\\phy\\io\\kwik\\model.py\", line 299, in __init__\r\n    clustering=clustering)\r\n  File \"c:\\storage\\workspaces\\phy\\phy\\io\\kwik\\model.py\", line 648, in open\r\n    self._clustering_changed(self._clustering)\r\n  File \"c:\\storage\\workspaces\\phy\\phy\\io\\kwik\\model.py\", line 723, in _clusterin\r\ng_changed\r\n    self._load_clustering_metadata()\r\n  File \"c:\\storage\\workspaces\\phy\\phy\\io\\kwik\\model.py\", line 513, in _load_clus\r\ntering_metadata\r\n    for attr in attrs}\r\n  File \"c:\\storage\\workspaces\\phy\\phy\\io\\kwik\\model.py\", line 513, in <dictcomp>\r\n\r\n    for attr in attrs}\r\n  File \"c:\\storage\\workspaces\\phy\\phy\\io\\h5.py\", line 165, in read_attr\r\n    return attrs[attr_name]\r\n  File \"C:\\Program Files\\KlustaViewa\\WinPython-64bit-2.7.6.4\\python-2.7.6.amd64\\\r\nlib\\site-packages\\h5py\\_hl\\attrs.py\", line 58, in __getitem__\r\n    attr.read(arr)\r\n  File \"h5a.pyx\", line 354, in h5py.h5a.AttrID.read (h5py\\h5a.c:4342)\r\n  File \"_proxy.pyx\", line 36, in h5py._proxy.attr_rw (h5py\\_proxy.c:921)\r\nIOError: unable to read attribute (Attribute: Read failed)\r\n262dddba0e310e0b88a30b3d3e2f2f51e7bb31f4 is the first bad commit\r\ncommit 262dddba0e310e0b88a30b3d3e2f2f51e7bb31f4\r\nAuthor: Cyrille Rossant <cyrille.rossant@gmail.com>\r\nDate:   Wed Jun 10 18:44:21 2015 +0200\r\n\r\n    Implemented support for clustering metadata.\r\n\r\n:040000 040000 e60dca2ca6613f91d7fea92d165a0a4249a59da3 d11510395d2107b59226f0df\r\na3a0bdc533e8671e M      phy\r\nbisect run success\r\n```"}}