{"action":"created","issue":{"url":"https://api.github.com/repos/quantifish/isotope/issues/9","labels_url":"https://api.github.com/repos/quantifish/isotope/issues/9/labels{/name}","comments_url":"https://api.github.com/repos/quantifish/isotope/issues/9/comments","events_url":"https://api.github.com/repos/quantifish/isotope/issues/9/events","html_url":"https://github.com/quantifish/isotope/issues/9","id":101546326,"number":9,"title":"What is the current model doing?","user":{"login":"quantifish","id":5566375,"avatar_url":"https://avatars.githubusercontent.com/u/5566375?v=3","gravatar_id":"","url":"https://api.github.com/users/quantifish","html_url":"https://github.com/quantifish","followers_url":"https://api.github.com/users/quantifish/followers","following_url":"https://api.github.com/users/quantifish/following{/other_user}","gists_url":"https://api.github.com/users/quantifish/gists{/gist_id}","starred_url":"https://api.github.com/users/quantifish/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/quantifish/subscriptions","organizations_url":"https://api.github.com/users/quantifish/orgs","repos_url":"https://api.github.com/users/quantifish/repos","events_url":"https://api.github.com/users/quantifish/events{/privacy}","received_events_url":"https://api.github.com/users/quantifish/received_events","type":"User","site_admin":false},"labels":[],"state":"open","locked":false,"assignee":null,"milestone":null,"comments":5,"created_at":"2015-08-18T01:36:39Z","updated_at":"2015-08-18T05:12:15Z","closed_at":null,"body":"To move forward we need to know what the current model is doing.\r\n\r\nAt the moment it looks like we are fitting to two species as if they were one... Is that right?\r\n\r\nAnd where we want to get to is fitting to all species, each with their own estimated parameters, and some shared parameters... Is that right?\r\n\r\nDo you have a document that you have written somewhere describing the math and the model (in your own words)?\r\n\r\nI'm sorry Yumi but it is taking me a while to figure all this stuff out. We need waaaayyyyy more figures."},"comment":{"url":"https://api.github.com/repos/quantifish/isotope/issues/comments/132073071","html_url":"https://github.com/quantifish/isotope/issues/9#issuecomment-132073071","issue_url":"https://api.github.com/repos/quantifish/isotope/issues/9","id":132073071,"user":{"login":"yarimitsu","id":13755255,"avatar_url":"https://avatars.githubusercontent.com/u/13755255?v=3","gravatar_id":"","url":"https://api.github.com/users/yarimitsu","html_url":"https://github.com/yarimitsu","followers_url":"https://api.github.com/users/yarimitsu/followers","following_url":"https://api.github.com/users/yarimitsu/following{/other_user}","gists_url":"https://api.github.com/users/yarimitsu/gists{/gist_id}","starred_url":"https://api.github.com/users/yarimitsu/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/yarimitsu/subscriptions","organizations_url":"https://api.github.com/users/yarimitsu/orgs","repos_url":"https://api.github.com/users/yarimitsu/repos","events_url":"https://api.github.com/users/yarimitsu/events{/privacy}","received_events_url":"https://api.github.com/users/yarimitsu/received_events","type":"User","site_admin":false},"created_at":"2015-08-18T05:12:15Z","updated_at":"2015-08-18T05:12:15Z","body":"OR maybe I should just do one species at a time and we call it pretty good.\n\nThe main reason I wanted to do the hierarchical thing was because the\nLaPlaces Demon model had parameters all over the place and I just didn't\nknow enough to realize how messed up it was. This stan implementation is\nworking so much better. Now that I have some confidence in the model, I'm\nglad to skip the hassle and heartache of adding more complexity, and it\nwould be easy to do each species separately from here.\n\nThose plots - so much better. Anything that looks like a bullseye should be\nworked in wherever possible in my opinion...\n\nTHANKS for all your time on this. Sorry it's such a can of worms and I have\nalmost nothing to contribute. I owe you so big for this.\n\nOn Mon, Aug 17, 2015 at 8:10 PM, Darcy Webber <notifications@github.com>\nwrote:\n\n> OK, sounds good. Gotta to for now. I have just pushed. Made a lot of\n> changes to plots and have restructured some code in anticipation of the\n> future changes. I am happy with the plots for now as we can see all\n> posteriors, priors and model fits. I will work on coding up for multiple\n> species tonight and see what we make of it. It will be tricky to create\n> plots that capture everything by species etc, but we will get there.\n>\n> —\n> Reply to this email directly or view it on GitHub\n> <https://github.com/quantifish/isotope/issues/9#issuecomment-132067152>.\n>\n"}}