{"action":"opened","issue":{"url":"https://api.github.com/repos/ODiogoSilva/TriFusion/issues/98","labels_url":"https://api.github.com/repos/ODiogoSilva/TriFusion/issues/98/labels{/name}","comments_url":"https://api.github.com/repos/ODiogoSilva/TriFusion/issues/98/comments","events_url":"https://api.github.com/repos/ODiogoSilva/TriFusion/issues/98/events","html_url":"https://github.com/ODiogoSilva/TriFusion/issues/98","id":83633399,"number":98,"title":"Additional data filter output","user":{"login":"ODiogoSilva","id":1532292,"avatar_url":"https://avatars.githubusercontent.com/u/1532292?v=3","gravatar_id":"","url":"https://api.github.com/users/ODiogoSilva","html_url":"https://github.com/ODiogoSilva","followers_url":"https://api.github.com/users/ODiogoSilva/followers","following_url":"https://api.github.com/users/ODiogoSilva/following{/other_user}","gists_url":"https://api.github.com/users/ODiogoSilva/gists{/gist_id}","starred_url":"https://api.github.com/users/ODiogoSilva/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/ODiogoSilva/subscriptions","organizations_url":"https://api.github.com/users/ODiogoSilva/orgs","repos_url":"https://api.github.com/users/ODiogoSilva/repos","events_url":"https://api.github.com/users/ODiogoSilva/events{/privacy}","received_events_url":"https://api.github.com/users/ODiogoSilva/received_events","type":"User","site_admin":false},"labels":[{"url":"https://api.github.com/repos/ODiogoSilva/TriFusion/labels/enhancement","name":"enhancement","color":"84b6eb"}],"state":"open","locked":false,"assignee":null,"milestone":{"url":"https://api.github.com/repos/ODiogoSilva/TriFusion/milestones/2","html_url":"https://github.com/ODiogoSilva/TriFusion/milestones/0.3","labels_url":"https://api.github.com/repos/ODiogoSilva/TriFusion/milestones/2/labels","id":918101,"number":2,"title":"0.3","description":"Complete functionality of Process module","creator":{"login":"ODiogoSilva","id":1532292,"avatar_url":"https://avatars.githubusercontent.com/u/1532292?v=3","gravatar_id":"","url":"https://api.github.com/users/ODiogoSilva","html_url":"https://github.com/ODiogoSilva","followers_url":"https://api.github.com/users/ODiogoSilva/followers","following_url":"https://api.github.com/users/ODiogoSilva/following{/other_user}","gists_url":"https://api.github.com/users/ODiogoSilva/gists{/gist_id}","starred_url":"https://api.github.com/users/ODiogoSilva/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/ODiogoSilva/subscriptions","organizations_url":"https://api.github.com/users/ODiogoSilva/orgs","repos_url":"https://api.github.com/users/ODiogoSilva/repos","events_url":"https://api.github.com/users/ODiogoSilva/events{/privacy}","received_events_url":"https://api.github.com/users/ODiogoSilva/received_events","type":"User","site_admin":false},"open_issues":3,"closed_issues":63,"state":"open","created_at":"2014-12-30T23:17:24Z","updated_at":"2015-06-01T18:24:01Z","due_on":null,"closed_at":null},"comments":0,"created_at":"2015-06-01T18:24:01Z","updated_at":"2015-06-01T18:24:01Z","closed_at":null,"body":"With phylogenomic data sets in mind, a few additional options to filter output should be implemented in Process:\r\n\r\n- Taxa filters: \r\n    - Filter alignments with a minimum/maximum number of taxa\r\n    - Filter alignments that contain, at least, the specified taxa\r\n    - Filter alignments that contain specific sets of taxa\r\n\r\n- Alignment filters:\r\n    - Filter only certain codon positions (i.e., save alignments without the 3rd codon position, or any combination of codon positions\r\n    - Filters files with less than a threshold of allowed missing data"}}