{"action":"closed","issue":{"url":"https://api.github.com/repos/intermine/intermine/issues/1071","labels_url":"https://api.github.com/repos/intermine/intermine/issues/1071/labels{/name}","comments_url":"https://api.github.com/repos/intermine/intermine/issues/1071/comments","events_url":"https://api.github.com/repos/intermine/intermine/issues/1071/events","html_url":"https://github.com/intermine/intermine/issues/1071","id":92848497,"number":1071,"title":"Complexes - fails for human","user":{"login":"julie-sullivan","id":1663057,"avatar_url":"https://avatars.githubusercontent.com/u/1663057?v=3","gravatar_id":"","url":"https://api.github.com/users/julie-sullivan","html_url":"https://github.com/julie-sullivan","followers_url":"https://api.github.com/users/julie-sullivan/followers","following_url":"https://api.github.com/users/julie-sullivan/following{/other_user}","gists_url":"https://api.github.com/users/julie-sullivan/gists{/gist_id}","starred_url":"https://api.github.com/users/julie-sullivan/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/julie-sullivan/subscriptions","organizations_url":"https://api.github.com/users/julie-sullivan/orgs","repos_url":"https://api.github.com/users/julie-sullivan/repos","events_url":"https://api.github.com/users/julie-sullivan/events{/privacy}","received_events_url":"https://api.github.com/users/julie-sullivan/received_events","type":"User","site_admin":false},"labels":[{"url":"https://api.github.com/repos/intermine/intermine/labels/bug","name":"bug","color":"fc2929"}],"state":"closed","locked":false,"assignee":{"login":"julie-sullivan","id":1663057,"avatar_url":"https://avatars.githubusercontent.com/u/1663057?v=3","gravatar_id":"","url":"https://api.github.com/users/julie-sullivan","html_url":"https://github.com/julie-sullivan","followers_url":"https://api.github.com/users/julie-sullivan/followers","following_url":"https://api.github.com/users/julie-sullivan/following{/other_user}","gists_url":"https://api.github.com/users/julie-sullivan/gists{/gist_id}","starred_url":"https://api.github.com/users/julie-sullivan/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/julie-sullivan/subscriptions","organizations_url":"https://api.github.com/users/julie-sullivan/orgs","repos_url":"https://api.github.com/users/julie-sullivan/repos","events_url":"https://api.github.com/users/julie-sullivan/events{/privacy}","received_events_url":"https://api.github.com/users/julie-sullivan/received_events","type":"User","site_admin":false},"milestone":{"url":"https://api.github.com/repos/intermine/intermine/milestones/14","html_url":"https://github.com/intermine/intermine/milestones/InterMine%201.6","labels_url":"https://api.github.com/repos/intermine/intermine/milestones/14/labels","id":963576,"number":14,"title":"InterMine 1.6","description":"Updates to the query results","creator":{"login":"julie-sullivan","id":1663057,"avatar_url":"https://avatars.githubusercontent.com/u/1663057?v=3","gravatar_id":"","url":"https://api.github.com/users/julie-sullivan","html_url":"https://github.com/julie-sullivan","followers_url":"https://api.github.com/users/julie-sullivan/followers","following_url":"https://api.github.com/users/julie-sullivan/following{/other_user}","gists_url":"https://api.github.com/users/julie-sullivan/gists{/gist_id}","starred_url":"https://api.github.com/users/julie-sullivan/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/julie-sullivan/subscriptions","organizations_url":"https://api.github.com/users/julie-sullivan/orgs","repos_url":"https://api.github.com/users/julie-sullivan/repos","events_url":"https://api.github.com/users/julie-sullivan/events{/privacy}","received_events_url":"https://api.github.com/users/julie-sullivan/received_events","type":"User","site_admin":false},"open_issues":1,"closed_issues":86,"state":"open","created_at":"2015-02-03T14:27:01Z","updated_at":"2015-10-14T10:09:28Z","due_on":"2015-10-30T00:00:00Z","closed_at":null},"comments":3,"created_at":"2015-07-03T10:42:11Z","updated_at":"2015-10-14T10:09:28Z","closed_at":"2015-10-14T10:09:28Z","body":"See #804\r\n\r\n```\r\nBUILD FAILED\r\n/local-homes/julie/git/intermine/imbuild/integrate.xml:54: The following error occurred while executing this line:\r\n/local-homes/julie/git/intermine/imbuild/source.xml:330: java.lang.NullPointerException\r\n\tat java.util.TreeMap.put(TreeMap.java:556)\r\n\tat java.util.TreeSet.add(TreeSet.java:255)\r\n\tat org.intermine.objectstore.fastcollections.ObjectStoreFastCollectionsForTranslatorImpl.execute(ObjectStoreFastCollectionsForTranslatorImpl.java:253)\r\n\tat org.intermine.dataloader.BatchingFetcher$NoseyObjectStore.execute(BatchingFetcher.java:580)\r\n\tat org.intermine.objectstore.query.ResultsBatches.fetchBatchFromObjectStore(ResultsBatches.java:192)\r\n\tat org.intermine.objectstore.query.PrefetchManager.doRequest(PrefetchManager.java:241)\r\n\tat org.intermine.objectstore.query.PrefetchManager.doRequest(PrefetchManager.java:146)\r\n\tat org.intermine.objectstore.query.ResultsBatches.getBatch(ResultsBatches.java:164)\r\n\tat org.intermine.objectstore.query.ResultsBatches.getRowsFromBatch(ResultsBatches.java:139)\r\n\tat org.intermine.objectstore.query.Results.range(Results.java:197)\r\n\tat org.intermine.objectstore.query.SingletonResults.range(SingletonResults.java:65)\r\n\tat org.intermine.objectstore.query.Results.get(Results.java:226)\r\n\tat org.intermine.objectstore.query.Results$Iter.hasNext(Results.java:378)\r\n\tat org.intermine.dataloader.ObjectStoreDataLoader.process(ObjectStoreDataLoader.java:135)\r\n\tat org.intermine.dataloader.ObjectStoreDataLoader.process(ObjectStoreDataLoader.java:60)\r\n\tat org.intermine.dataloader.ObjectStoreDataLoaderTask.execute(ObjectStoreDataLoaderTask.java:128)\r\n\tat org.apache.tools.ant.UnknownElement.execute(UnknownElement.java:292)\r\n\tat sun.reflect.GeneratedMethodAccessor4.invoke(Unknown Source)\r\n\tat sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)\r\n\tat java.lang.reflect.Method.invoke(Method.java:606)\r\n\tat org.apache.tools.ant.dispatch.DispatchUtils.execute(DispatchUtils.java:106)\r\n\tat org.apache.tools.ant.Task.perform(Task.java:348)\r\n\tat org.apache.tools.ant.Target.execute(Target.java:435)\r\n\tat org.apache.tools.ant.Target.performTasks(Target.java:456)\r\n\tat org.apache.tools.ant.Project.executeSortedTargets(Project.java:1393)\r\n\r\n```\r\n\r\nEverything loads into the items database just fine, so we must have an empty collection somewhere perhaps. We also need a better error msg."}}