{"action":"created","issue":{"url":"https://api.github.com/repos/marcelm/cutadapt-issuetest2/issues/35","labels_url":"https://api.github.com/repos/marcelm/cutadapt-issuetest2/issues/35/labels{/name}","comments_url":"https://api.github.com/repos/marcelm/cutadapt-issuetest2/issues/35/comments","events_url":"https://api.github.com/repos/marcelm/cutadapt-issuetest2/issues/35/events","html_url":"https://github.com/marcelm/cutadapt-issuetest2/issues/35","id":58732915,"number":35,"title":"remove adaptor sequence","user":{"login":"marcelm","id":724864,"avatar_url":"https://avatars.githubusercontent.com/u/724864?v=3","gravatar_id":"","url":"https://api.github.com/users/marcelm","html_url":"https://github.com/marcelm","followers_url":"https://api.github.com/users/marcelm/followers","following_url":"https://api.github.com/users/marcelm/following{/other_user}","gists_url":"https://api.github.com/users/marcelm/gists{/gist_id}","starred_url":"https://api.github.com/users/marcelm/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/marcelm/subscriptions","organizations_url":"https://api.github.com/users/marcelm/orgs","repos_url":"https://api.github.com/users/marcelm/repos","events_url":"https://api.github.com/users/marcelm/events{/privacy}","received_events_url":"https://api.github.com/users/marcelm/received_events","type":"User","site_admin":false},"labels":[{"url":"https://api.github.com/repos/marcelm/cutadapt-issuetest2/labels/bug","name":"bug","color":"fc2929"},{"url":"https://api.github.com/repos/marcelm/cutadapt-issuetest2/labels/imported","name":"imported","color":"FFFFFF"},{"url":"https://api.github.com/repos/marcelm/cutadapt-issuetest2/labels/invalid","name":"invalid","color":"e6e6e6"}],"state":"open","locked":false,"assignee":null,"milestone":null,"comments":3,"created_at":"2015-02-24T12:41:43Z","updated_at":"2015-02-24T12:41:56Z","closed_at":null,"body":"_From [xinhui...@gmail.com](https://code.google.com/u/105968875265431851569/) on January 18, 2012 17:50:16_\n\nHi there, \r\ni run the cutadapt to remove adaptor sequence from RNA-SEQ data, but it gave me some error. could you please help me fix it? Thanks. \r\nBelow is the error,\r\n\r\n'import site' failed; use -v for traceback\r\nTraceback (most recent call last):\r\n  File \"/opt/bioinf/bin/cutadapt\", line 71, in \\<module>\r\n    _libdir = join(dirname(realpath(__file__)), 'lib')\r\n  File \"/usr/lib64/python2.6/posixpath.py\", line 362, in realpath\r\n    if islink(component):\r\n  File \"/usr/lib64/python2.6/posixpath.py\", line 135, in islink\r\n    return stat.S_ISLNK(st.st_mode)\r\nAttributeError: 'module' object has no attribute 'S_ISLNK'\n\n_Original issue: http://code.google.com/p/cutadapt/issues/detail?id=35_"},"comment":{"url":"https://api.github.com/repos/marcelm/cutadapt-issuetest2/issues/comments/75749582","html_url":"https://github.com/marcelm/cutadapt-issuetest2/issues/35#issuecomment-75749582","issue_url":"https://api.github.com/repos/marcelm/cutadapt-issuetest2/issues/35","id":75749582,"user":{"login":"marcelm","id":724864,"avatar_url":"https://avatars.githubusercontent.com/u/724864?v=3","gravatar_id":"","url":"https://api.github.com/users/marcelm","html_url":"https://github.com/marcelm","followers_url":"https://api.github.com/users/marcelm/followers","following_url":"https://api.github.com/users/marcelm/following{/other_user}","gists_url":"https://api.github.com/users/marcelm/gists{/gist_id}","starred_url":"https://api.github.com/users/marcelm/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/marcelm/subscriptions","organizations_url":"https://api.github.com/users/marcelm/orgs","repos_url":"https://api.github.com/users/marcelm/repos","events_url":"https://api.github.com/users/marcelm/events{/privacy}","received_events_url":"https://api.github.com/users/marcelm/received_events","type":"User","site_admin":false},"created_at":"2015-02-24T12:41:56Z","updated_at":"2015-02-24T12:41:56Z","body":"_From [marcel.m...@tu-dortmund.de](https://code.google.com/u/115749445199231802729/) on January 20, 2012 03:16:13_\n\nThere seems to be a problem with your installation. Please run this:\r\n\r\npython -c 'import stat; print stat.__file__'\r\n\r\nThis should say something like /usr/lib64/python2.4/stat.py.\r\n\r\nHave you modified your PYTHONPATH environment variable?"}}