{"action":"created","issue":{"url":"https://api.github.com/repos/shenkers/isoscm/issues/10","labels_url":"https://api.github.com/repos/shenkers/isoscm/issues/10/labels{/name}","comments_url":"https://api.github.com/repos/shenkers/isoscm/issues/10/comments","events_url":"https://api.github.com/repos/shenkers/isoscm/issues/10/events","html_url":"https://github.com/shenkers/isoscm/issues/10","id":92809521,"number":10,"title":"Large (>1TB) isoforms.gtf - enumerate","user":{"login":"adomingues","id":2607577,"avatar_url":"https://avatars.githubusercontent.com/u/2607577?v=3","gravatar_id":"","url":"https://api.github.com/users/adomingues","html_url":"https://github.com/adomingues","followers_url":"https://api.github.com/users/adomingues/followers","following_url":"https://api.github.com/users/adomingues/following{/other_user}","gists_url":"https://api.github.com/users/adomingues/gists{/gist_id}","starred_url":"https://api.github.com/users/adomingues/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/adomingues/subscriptions","organizations_url":"https://api.github.com/users/adomingues/orgs","repos_url":"https://api.github.com/users/adomingues/repos","events_url":"https://api.github.com/users/adomingues/events{/privacy}","received_events_url":"https://api.github.com/users/adomingues/received_events","type":"User","site_admin":false},"labels":[],"state":"open","locked":false,"assignee":null,"milestone":null,"comments":3,"created_at":"2015-07-03T07:11:01Z","updated_at":"2015-07-06T13:02:16Z","closed_at":null,"body":"I am was running enumerate in relatively large datasets (~30GB bam), with -max_isoforms 20, but had to kill the job because it was generating >1TB isoforms.gtf. Is this to be expected and should -max_isoforms be set to a lower number? \r\n\r\nDetails:\r\nZebrafish\r\n100PE reads\r\nMapping with STAR.\r\n\r\nThe compare command ran fine. \r\n\r\nCheers."},"comment":{"url":"https://api.github.com/repos/shenkers/isoscm/issues/comments/118848425","html_url":"https://github.com/shenkers/isoscm/issues/10#issuecomment-118848425","issue_url":"https://api.github.com/repos/shenkers/isoscm/issues/10","id":118848425,"user":{"login":"shenkers","id":2341961,"avatar_url":"https://avatars.githubusercontent.com/u/2341961?v=3","gravatar_id":"","url":"https://api.github.com/users/shenkers","html_url":"https://github.com/shenkers","followers_url":"https://api.github.com/users/shenkers/followers","following_url":"https://api.github.com/users/shenkers/following{/other_user}","gists_url":"https://api.github.com/users/shenkers/gists{/gist_id}","starred_url":"https://api.github.com/users/shenkers/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/shenkers/subscriptions","organizations_url":"https://api.github.com/users/shenkers/orgs","repos_url":"https://api.github.com/users/shenkers/repos","events_url":"https://api.github.com/users/shenkers/events{/privacy}","received_events_url":"https://api.github.com/users/shenkers/received_events","type":"User","site_admin":false},"created_at":"2015-07-06T13:02:16Z","updated_at":"2015-07-06T13:02:16Z","body":"Of course! My email is sol.shenker@gmail.com"}}