{"action":"created","issue":{"url":"https://api.github.com/repos/agnwinds/python/issues/160","labels_url":"https://api.github.com/repos/agnwinds/python/issues/160/labels{/name}","comments_url":"https://api.github.com/repos/agnwinds/python/issues/160/comments","events_url":"https://api.github.com/repos/agnwinds/python/issues/160/events","html_url":"https://github.com/agnwinds/python/issues/160","id":97368837,"number":160,"title":"Vertically extended disk not working","user":{"login":"kslong","id":2530901,"avatar_url":"https://avatars.githubusercontent.com/u/2530901?v=3","gravatar_id":"","url":"https://api.github.com/users/kslong","html_url":"https://github.com/kslong","followers_url":"https://api.github.com/users/kslong/followers","following_url":"https://api.github.com/users/kslong/following{/other_user}","gists_url":"https://api.github.com/users/kslong/gists{/gist_id}","starred_url":"https://api.github.com/users/kslong/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/kslong/subscriptions","organizations_url":"https://api.github.com/users/kslong/orgs","repos_url":"https://api.github.com/users/kslong/repos","events_url":"https://api.github.com/users/kslong/events{/privacy}","received_events_url":"https://api.github.com/users/kslong/received_events","type":"User","site_admin":false},"labels":[{"url":"https://api.github.com/repos/agnwinds/python/labels/bug","name":"bug","color":"207de5"}],"state":"open","locked":false,"assignee":null,"milestone":{"url":"https://api.github.com/repos/agnwinds/python/milestones/1","html_url":"https://github.com/agnwinds/python/milestones/Public%20Release","labels_url":"https://api.github.com/repos/agnwinds/python/milestones/1/labels","id":721438,"number":1,"title":"Public Release","description":"","creator":{"login":"jhmatthews","id":3007249,"avatar_url":"https://avatars.githubusercontent.com/u/3007249?v=3","gravatar_id":"","url":"https://api.github.com/users/jhmatthews","html_url":"https://github.com/jhmatthews","followers_url":"https://api.github.com/users/jhmatthews/followers","following_url":"https://api.github.com/users/jhmatthews/following{/other_user}","gists_url":"https://api.github.com/users/jhmatthews/gists{/gist_id}","starred_url":"https://api.github.com/users/jhmatthews/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/jhmatthews/subscriptions","organizations_url":"https://api.github.com/users/jhmatthews/orgs","repos_url":"https://api.github.com/users/jhmatthews/repos","events_url":"https://api.github.com/users/jhmatthews/events{/privacy}","received_events_url":"https://api.github.com/users/jhmatthews/received_events","type":"User","site_admin":false},"open_issues":8,"closed_issues":17,"state":"open","created_at":"2014-07-15T09:00:08Z","updated_at":"2015-07-27T12:02:28Z","due_on":null,"closed_at":null},"comments":3,"created_at":"2015-07-27T02:03:44Z","updated_at":"2015-07-31T10:20:26Z","closed_at":null,"body":"We have a mode intended to allow a vertically extended list, mode 2 of disk_type.  We are apparently unable to construct photons in this mode.  The program seems simply to get stuck in some kind of infinite loop.  There is the .pf file which I used.\r\n\r\nWind_type(0=SV,1=Sphere,2=Previous,3=Hydro,4=Corona,5=knigge,6=homologous,7=yso,8=elvis,9=shell)                    0\r\nAtomic_data                         data/standard78\r\nphotons_per_cycle                              1e6\r\nIonization_cycles                               10\r\nspectrum_cycles                                   1\r\nCoord.system(0=spherical,1=cylindrical,2=spherical_polar,3=cyl_var)                    1\r\nWind.dim.in.x_or_r.direction                     30\r\nWind.dim.in.z_or_theta.direction                   30\r\nWind_ionization(0=on.the.spot,1=LTE,2=fixed,3=recalc_bb,6=pairwise_bb,7=pairwise_pow,8=matrix_bb,9=matrix_pow)                    3\r\nLine_transfer(0=pure.abs,1=pure.scat,2=sing.scat,3=escape.prob,6=macro_atoms,7=macro_atoms+aniso.scattering)                    3\r\nThermal_balance_options(0=everything.on,1=no.adiabatic)                    0\r\nSystem_type(0=star,1=binary,2=agn)                    0\r\ndisk.type(0=no.disk,1=standard.flat.disk,2=vertically.extended.disk)                    2\r\nStar_radiation(y=1)                               1\r\nDisk_radiation(y=1)                               1\r\nBoundary_layer_radiation(y=1)                     0\r\nWind_radiation(y=1)                              1\r\nRad_type_for_star(0=bb,1=models)_to_make_wind                    0\r\nRad_type_for_disk(0=bb,1=models)_to_make_wind                    0\r\nmstar(msol)                                     0.8\r\nrstar(cm)                                     7e+08\r\ntstar                                         40000\r\ndisk.mdot(msol/yr)                            1e-08\r\nDisk.illumination.treatment(0=no.rerad,1=high.albedo,2=thermalized.rerad,3=analytic)                    0\r\nDisk.temperature.profile(0=standard;1=readin)                    0\r\ndisk.radmax(cm)                             2.4e+10\r\nwind.radmax(cm)                               1e+11\r\nwind.t.init                                   40000\r\nwind.mdot(msol/yr)                            1e-09\r\nsv.diskmin(units_of_rstar)                        4\r\nsv.diskmax(units_of_rstar)                       12\r\nsv.thetamin(deg)                                 20\r\nsv.thetamax(deg)                                 65\r\nsv.mdot_r_exponent                                0\r\nsv.v_infinity(in_units_of_vescape                    3\r\nsv.acceleration_length(cm)                    7e+10\r\nsv.acceleration_exponent                        1.5\r\nwind.filling_factor(1=smooth,<1=clumped)                    1\r\nRad_type_for_star(0=bb,1=models,2=uniform)_in_final_spectrum                    0\r\nRad_type_for_disk(0=bb,1=models,2=uniform)_in_final_spectrum                    0\r\nspectrum_wavemin                              850\r\nspectrum_wavemax                              1850\r\nno_observers                                      4\r\nangle(0=pole)                                    10\r\nangle(0=pole)                                    30\r\nangle(0=pole)                                    60\r\nangle(0=pole)                                    80\r\nlive.or.die(0).or.extract(anything_else)                    1\r\nspec.type(flambda(1),fnu(2),basic(other)                    1\r\nreverb.type                                       0\r\nPhoton.sampling.approach(0=T,1=(f1,f2),2=cv,3=yso,4=user_defined,5=cloudy_test,6=wide,7=AGN,8=logarithmic)                    2\r\n"},"comment":{"url":"https://api.github.com/repos/agnwinds/python/issues/comments/126635755","html_url":"https://github.com/agnwinds/python/issues/160#issuecomment-126635755","issue_url":"https://api.github.com/repos/agnwinds/python/issues/160","id":126635755,"user":{"login":"jhmatthews","id":3007249,"avatar_url":"https://avatars.githubusercontent.com/u/3007249?v=3","gravatar_id":"","url":"https://api.github.com/users/jhmatthews","html_url":"https://github.com/jhmatthews","followers_url":"https://api.github.com/users/jhmatthews/followers","following_url":"https://api.github.com/users/jhmatthews/following{/other_user}","gists_url":"https://api.github.com/users/jhmatthews/gists{/gist_id}","starred_url":"https://api.github.com/users/jhmatthews/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/jhmatthews/subscriptions","organizations_url":"https://api.github.com/users/jhmatthews/orgs","repos_url":"https://api.github.com/users/jhmatthews/repos","events_url":"https://api.github.com/users/jhmatthews/events{/privacy}","received_events_url":"https://api.github.com/users/jhmatthews/received_events","type":"User","site_admin":false},"created_at":"2015-07-31T10:20:25Z","updated_at":"2015-07-31T10:20:25Z","body":"Hunch: I bet this is due to moving the order of the parameter file around (disk.type got moved to after system type, before it was specified later)."}}