{"action":"created","issue":{"url":"https://api.github.com/repos/biocore/scikit-bio/issues/857","labels_url":"https://api.github.com/repos/biocore/scikit-bio/issues/857/labels{/name}","comments_url":"https://api.github.com/repos/biocore/scikit-bio/issues/857/comments","events_url":"https://api.github.com/repos/biocore/scikit-bio/issues/857/events","html_url":"https://github.com/biocore/scikit-bio/issues/857","id":58316583,"number":857,"title":"Tests fail when run twice in a 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minor","color":"ffcccc"}],"state":"closed","locked":false,"assignee":{"login":"anderspitman","id":7820200,"avatar_url":"https://avatars.githubusercontent.com/u/7820200?v=3","gravatar_id":"","url":"https://api.github.com/users/anderspitman","html_url":"https://github.com/anderspitman","followers_url":"https://api.github.com/users/anderspitman/followers","following_url":"https://api.github.com/users/anderspitman/following{/other_user}","gists_url":"https://api.github.com/users/anderspitman/gists{/gist_id}","starred_url":"https://api.github.com/users/anderspitman/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/anderspitman/subscriptions","organizations_url":"https://api.github.com/users/anderspitman/orgs","repos_url":"https://api.github.com/users/anderspitman/repos","events_url":"https://api.github.com/users/anderspitman/events{/privacy}","received_events_url":"https://api.github.com/users/anderspitman/received_events","type":"User","site_admin":false},"milestone":{"url":"https://api.github.com/repos/biocore/scikit-bio/milestones/13","html_url":"https://github.com/biocore/scikit-bio/milestones/0.3.0:%20Sequences,%20Collections,%20and%20Alignments,%20oh%20my!","labels_url":"https://api.github.com/repos/biocore/scikit-bio/milestones/13/labels","id":976974,"number":13,"title":"0.3.0: Sequences, Collections, and Alignments, oh my!","description":"Clean up `Alignment` API and better integrate alignment algorithms with sequence objects and collections.","creator":{"login":"ebolyen","id":3976804,"avatar_url":"https://avatars.githubusercontent.com/u/3976804?v=3","gravatar_id":"","url":"https://api.github.com/users/ebolyen","html_url":"https://github.com/ebolyen","followers_url":"https://api.github.com/users/ebolyen/followers","following_url":"https://api.github.com/users/ebolyen/following{/other_user}","gists_url":"https://api.github.com/users/ebolyen/gists{/gist_id}","starred_url":"https://api.github.com/users/ebolyen/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/ebolyen/subscriptions","organizations_url":"https://api.github.com/users/ebolyen/orgs","repos_url":"https://api.github.com/users/ebolyen/repos","events_url":"https://api.github.com/users/ebolyen/events{/privacy}","received_events_url":"https://api.github.com/users/ebolyen/received_events","type":"User","site_admin":false},"open_issues":27,"closed_issues":21,"state":"open","created_at":"2015-02-12T15:40:43Z","updated_at":"2015-03-11T22:01:17Z","due_on":"2015-04-01T07:00:00Z","closed_at":null},"comments":5,"created_at":"2015-02-20T06:50:54Z","updated_at":"2015-03-11T22:01:17Z","closed_at":"2015-03-11T22:01:17Z","body":"When running tests via ``numpy.testing.Tester``, if you run them twice in a row the second time fails:\r\n\r\n```python\r\nimport skbio\r\nskbio.test()\r\n...\r\nRan 1123 tests in 40.921s\r\n\r\nOK\r\nskbio.test()\r\n...\r\nRan 1123 tests in 41.168s\r\n\r\nFAILED (failures=3)\r\n```\r\n\r\nThe errors seem to indicate that expected warnings aren't happening:\r\n``AssertionError: No warning raised when calling PCoA``\r\n\r\nThis makes sense, because I've noticed certain warnings only occur the first time you use the procedure after importing it."},"comment":{"url":"https://api.github.com/repos/biocore/scikit-bio/issues/comments/78382014","html_url":"https://github.com/biocore/scikit-bio/issues/857#issuecomment-78382014","issue_url":"https://api.github.com/repos/biocore/scikit-bio/issues/857","id":78382014,"user":{"login":"jairideout","id":1847232,"avatar_url":"https://avatars.githubusercontent.com/u/1847232?v=3","gravatar_id":"","url":"https://api.github.com/users/jairideout","html_url":"https://github.com/jairideout","followers_url":"https://api.github.com/users/jairideout/followers","following_url":"https://api.github.com/users/jairideout/following{/other_user}","gists_url":"https://api.github.com/users/jairideout/gists{/gist_id}","starred_url":"https://api.github.com/users/jairideout/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/jairideout/subscriptions","organizations_url":"https://api.github.com/users/jairideout/orgs","repos_url":"https://api.github.com/users/jairideout/repos","events_url":"https://api.github.com/users/jairideout/events{/privacy}","received_events_url":"https://api.github.com/users/jairideout/received_events","type":"User","site_admin":false},"created_at":"2015-03-11T22:01:17Z","updated_at":"2015-03-11T22:01:17Z","body":"Closing, see discussion in #871 for details."}}