{"action":"opened","issue":{"url":"https://api.github.com/repos/morrislab/phylowgs/issues/2","labels_url":"https://api.github.com/repos/morrislab/phylowgs/issues/2/labels{/name}","comments_url":"https://api.github.com/repos/morrislab/phylowgs/issues/2/comments","events_url":"https://api.github.com/repos/morrislab/phylowgs/issues/2/events","html_url":"https://github.com/morrislab/phylowgs/issues/2","id":79169489,"number":2,"title":"create_phylowgs_inputs.py ValueError: need more than 1 value to unpack","user":{"login":"keyuan","id":383639,"avatar_url":"https://avatars.githubusercontent.com/u/383639?v=3","gravatar_id":"","url":"https://api.github.com/users/keyuan","html_url":"https://github.com/keyuan","followers_url":"https://api.github.com/users/keyuan/followers","following_url":"https://api.github.com/users/keyuan/following{/other_user}","gists_url":"https://api.github.com/users/keyuan/gists{/gist_id}","starred_url":"https://api.github.com/users/keyuan/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/keyuan/subscriptions","organizations_url":"https://api.github.com/users/keyuan/orgs","repos_url":"https://api.github.com/users/keyuan/repos","events_url":"https://api.github.com/users/keyuan/events{/privacy}","received_events_url":"https://api.github.com/users/keyuan/received_events","type":"User","site_admin":false},"labels":[],"state":"open","locked":false,"assignee":null,"milestone":null,"comments":0,"created_at":"2015-05-21T21:33:19Z","updated_at":"2015-05-21T21:33:19Z","closed_at":null,"body":"Many thanks for putting the input parser code. I'm trying to use it to generate input files for the pilot 63 samples. I always get the following error:\r\n```\r\npython create_phylowgs_inputs.py -v sanger sample.vcf.gz\r\n```\r\n\r\n```\r\nTraceback (most recent call last):\r\n  File \"create_phylowgs_inputs.py\", line 685, in <module>\r\n    main()\r\n  File \"create_phylowgs_inputs.py\", line 659, in main\r\n    variants_and_reads = variant_parser.list_variants()\r\n  File \"create_phylowgs_inputs.py\", line 20, in list_variants\r\n    ref_reads, total_reads = self._calc_read_counts(variant)\r\n  File \"create_phylowgs_inputs.py\", line 111, in _calc_read_counts\r\n    reference_nt, variant_nt = self._find_ref_and_variant_nt(variant)\r\n  File \"create_phylowgs_inputs.py\", line 97, in _find_ref_and_variant_nt\r\n    normal_genotype, tumor_genotype = genotype.split('/')\r\nValueError: need more than 1 value to unpack\r\n```\r\n\r\nAny idea of why this is happening? Many thanks!"}}