{"action":"opened","issue":{"url":"https://api.github.com/repos/COMBINE-lab/salmon/issues/28","labels_url":"https://api.github.com/repos/COMBINE-lab/salmon/issues/28/labels{/name}","comments_url":"https://api.github.com/repos/COMBINE-lab/salmon/issues/28/comments","events_url":"https://api.github.com/repos/COMBINE-lab/salmon/issues/28/events","html_url":"https://github.com/COMBINE-lab/salmon/issues/28","id":114439469,"number":28,"title":"Recognition of file type for reads based on filename, not content","user":{"login":"ctb","id":51016,"avatar_url":"https://avatars.githubusercontent.com/u/51016?v=3","gravatar_id":"","url":"https://api.github.com/users/ctb","html_url":"https://github.com/ctb","followers_url":"https://api.github.com/users/ctb/followers","following_url":"https://api.github.com/users/ctb/following{/other_user}","gists_url":"https://api.github.com/users/ctb/gists{/gist_id}","starred_url":"https://api.github.com/users/ctb/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/ctb/subscriptions","organizations_url":"https://api.github.com/users/ctb/orgs","repos_url":"https://api.github.com/users/ctb/repos","events_url":"https://api.github.com/users/ctb/events{/privacy}","received_events_url":"https://api.github.com/users/ctb/received_events","type":"User","site_admin":false},"labels":[],"state":"open","locked":false,"assignee":null,"milestone":null,"comments":0,"created_at":"2015-10-31T23:06:55Z","updated_at":"2015-10-31T23:06:55Z","closed_at":null,"body":"So, it won't let me use .fq.1 and .fq.2 - it has to be .1.fq and .2.fq.\r\n\r\nI think either allowing a 'force' or simply checking to see if the file is FASTQ would be great."}}