{"action":"closed","issue":{"url":"https://api.github.com/repos/dereneaton/pyrad/issues/8","labels_url":"https://api.github.com/repos/dereneaton/pyrad/issues/8/labels{/name}","comments_url":"https://api.github.com/repos/dereneaton/pyrad/issues/8/comments","events_url":"https://api.github.com/repos/dereneaton/pyrad/issues/8/events","html_url":"https://github.com/dereneaton/pyrad/issues/8","id":52084989,"number":8,"title":"error in step 5","user":{"login":"chiasto","id":9158028,"avatar_url":"https://avatars.githubusercontent.com/u/9158028?v=3","gravatar_id":"","url":"https://api.github.com/users/chiasto","html_url":"https://github.com/chiasto","followers_url":"https://api.github.com/users/chiasto/followers","following_url":"https://api.github.com/users/chiasto/following{/other_user}","gists_url":"https://api.github.com/users/chiasto/gists{/gist_id}","starred_url":"https://api.github.com/users/chiasto/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/chiasto/subscriptions","organizations_url":"https://api.github.com/users/chiasto/orgs","repos_url":"https://api.github.com/users/chiasto/repos","events_url":"https://api.github.com/users/chiasto/events{/privacy}","received_events_url":"https://api.github.com/users/chiasto/received_events","type":"User","site_admin":false},"labels":[],"state":"closed","locked":false,"assignee":null,"milestone":null,"comments":1,"created_at":"2014-12-16T08:23:58Z","updated_at":"2015-03-19T15:33:09Z","closed_at":"2015-03-19T15:33:09Z","body":"I sometimes get the following error when calculating E (not sure if it has something to do with haploid settings, I will investigate that)\r\n\r\nstep 5: creating consensus seqs for 2 samples, using H=0.00000 E=0.00024\r\n /home/guest/bin/pyrad3/consensdp.py:35: RuntimeWarning: invalid value encountered in double_scalars\r\n  P = max(Q)/float(aa+bb+ab)\r\n..\r\n"}}