{"action":"closed","issue":{"url":"https://api.github.com/repos/jexp/batch-import/issues/116","labels_url":"https://api.github.com/repos/jexp/batch-import/issues/116/labels{/name}","comments_url":"https://api.github.com/repos/jexp/batch-import/issues/116/comments","events_url":"https://api.github.com/repos/jexp/batch-import/issues/116/events","html_url":"https://github.com/jexp/batch-import/issues/116","id":72238451,"number":116,"title":"No relations input","user":{"login":"jtgreen","id":5241868,"avatar_url":"https://avatars.githubusercontent.com/u/5241868?v=3","gravatar_id":"","url":"https://api.github.com/users/jtgreen","html_url":"https://github.com/jtgreen","followers_url":"https://api.github.com/users/jtgreen/followers","following_url":"https://api.github.com/users/jtgreen/following{/other_user}","gists_url":"https://api.github.com/users/jtgreen/gists{/gist_id}","starred_url":"https://api.github.com/users/jtgreen/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/jtgreen/subscriptions","organizations_url":"https://api.github.com/users/jtgreen/orgs","repos_url":"https://api.github.com/users/jtgreen/repos","events_url":"https://api.github.com/users/jtgreen/events{/privacy}","received_events_url":"https://api.github.com/users/jtgreen/received_events","type":"User","site_admin":false},"labels":[],"state":"closed","locked":false,"assignee":null,"milestone":null,"comments":0,"created_at":"2015-04-30T18:16:53Z","updated_at":"2015-04-30T18:48:21Z","closed_at":"2015-04-30T18:48:21Z","body":"When I run the following, no relations are inputed:\r\n\r\njohn@john-MS-7693:~/Dev/Sandbox/UMLSVis/batch-import$ java -server -Dfile.encoding=UTF-8 -Xmx4G     -jar target/batch-import-jar-with-dependencies.jar     umls.db ../cuistr_agg.csv ../cuirel.csv\r\nUsage: Importer data/dir nodes.csv relationships.csv [node_index node-index-name fulltext|exact nodes_index.csv rel_index rel-index-name fulltext|exact rels_index.csv ....]\r\nUsing: Importer umls.db ../cuistr_agg.csv ../cuirel.csv\r\n\r\nwhich results in:\r\n\r\nUsing Existing Configuration File\r\n.............................\r\nImporting 2929805 Nodes took 7 seconds \r\n\r\nImporting 0 Relationships skipped (32808046) took 23 seconds \r\n\r\nTotal import time: 34 seconds \r\n\r\nConfig is:\r\ndump_configuration=false\r\ncache_type=none\r\nuse_memory_mapped_buffers=true\r\nneostore.propertystore.db.index.keys.mapped_memory=5M\r\nneostore.propertystore.db.index.mapped_memory=5M\r\nneostore.nodestore.db.mapped_memory=200M\r\nneostore.relationshipstore.db.mapped_memory=500M\r\nneostore.propertystore.db.mapped_memory=200M\r\nneostore.propertystore.db.strings.mapped_memory=200M\r\nbatch_import.csv.quotes=false\r\nbatch_import.node_index.concepts=exact\r\n\r\nheads of each files are:\r\n# cuistr_agg.csv\r\ncui:string:concepts\tsyns\tstys\r\nC0000005\t['(131)I-MAA', '(131)I-Macroaggregated Albumin']\t['T116', 'T130', 'T121']\r\n\r\nand\r\n\r\ncui:string:concepts\tcui:string:concepts\trela\r\nC0236642\tC0270715\t\\N\r\nC0003787\tC0037728\t\\N\r\n\r\nI do not see a way to debug the why of the issue. \r\n\r\nThanks!"}}