{"action":"created","issue":{"url":"https://api.github.com/repos/omnia-md/conda-recipes/issues/94","labels_url":"https://api.github.com/repos/omnia-md/conda-recipes/issues/94/labels{/name}","comments_url":"https://api.github.com/repos/omnia-md/conda-recipes/issues/94/comments","events_url":"https://api.github.com/repos/omnia-md/conda-recipes/issues/94/events","html_url":"https://github.com/omnia-md/conda-recipes/issues/94","id":53965150,"number":94,"title":"Rebuilding linux openmm","user":{"login":"kyleabeauchamp","id":1900459,"avatar_url":"https://avatars.githubusercontent.com/u/1900459?v=3","gravatar_id":"","url":"https://api.github.com/users/kyleabeauchamp","html_url":"https://github.com/kyleabeauchamp","followers_url":"https://api.github.com/users/kyleabeauchamp/followers","following_url":"https://api.github.com/users/kyleabeauchamp/following{/other_user}","gists_url":"https://api.github.com/users/kyleabeauchamp/gists{/gist_id}","starred_url":"https://api.github.com/users/kyleabeauchamp/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/kyleabeauchamp/subscriptions","organizations_url":"https://api.github.com/users/kyleabeauchamp/orgs","repos_url":"https://api.github.com/users/kyleabeauchamp/repos","events_url":"https://api.github.com/users/kyleabeauchamp/events{/privacy}","received_events_url":"https://api.github.com/users/kyleabeauchamp/received_events","type":"User","site_admin":false},"labels":[],"state":"open","locked":false,"assignee":null,"milestone":null,"comments":31,"created_at":"2015-01-10T17:35:19Z","updated_at":"2015-01-11T20:39:24Z","closed_at":null,"body":"So I noticed that we didn't have any openmm6.2 py3x packages (https://binstar.org/omnia/openmm/files) in the main channel, which was probably because those packages already existed in the omnia-beta channel from my previous manual builds.  I therefore deleted the manual packages and restarted the build on jenkins to see if we can get everything built by monday"},"comment":{"url":"https://api.github.com/repos/omnia-md/conda-recipes/issues/comments/69510335","html_url":"https://github.com/omnia-md/conda-recipes/issues/94#issuecomment-69510335","issue_url":"https://api.github.com/repos/omnia-md/conda-recipes/issues/94","id":69510335,"user":{"login":"rmcgibbo","id":641278,"avatar_url":"https://avatars.githubusercontent.com/u/641278?v=3","gravatar_id":"","url":"https://api.github.com/users/rmcgibbo","html_url":"https://github.com/rmcgibbo","followers_url":"https://api.github.com/users/rmcgibbo/followers","following_url":"https://api.github.com/users/rmcgibbo/following{/other_user}","gists_url":"https://api.github.com/users/rmcgibbo/gists{/gist_id}","starred_url":"https://api.github.com/users/rmcgibbo/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/rmcgibbo/subscriptions","organizations_url":"https://api.github.com/users/rmcgibbo/orgs","repos_url":"https://api.github.com/users/rmcgibbo/repos","events_url":"https://api.github.com/users/rmcgibbo/events{/privacy}","received_events_url":"https://api.github.com/users/rmcgibbo/received_events","type":"User","site_admin":false},"created_at":"2015-01-11T20:39:24Z","updated_at":"2015-01-11T20:39:24Z","body":"I downloaded the py34 and installed. Files look good. All the GPU libraries are there.\r\n\r\n```\r\n$ python -m simtk.testInstallation\r\nThere are 3 Platforms available:\r\n\r\n1 Reference - Successfully computed forces\r\n2 CPU - Successfully computed forces\r\n3 OpenCL - Successfully computed forces\r\n\r\nMedian difference in forces between platforms:\r\n\r\nReference vs. CPU: 2.02073e-05\r\nReference vs. OpenCL: 2.15539e-05\r\nCPU vs. OpenCL: 1.5909e-05\r\n```\r\nThe fact that CUDA isn't there is my fault -- not yours.\r\n\r\n```\r\n(3.4)rmcgibbo@vspm9  ~ (3.4)\r\n$ ldd ~/miniconda/envs/3.4/lib/plugins/libOpenMMCUDA.so\r\n\tlinux-vdso.so.1 =>  (0x00007fffa407c000)\r\n\tlibOpenMM.so => /home/rmcgibbo/miniconda/envs/3.4/lib/plugins/../libOpenMM.so (0x00007fefcb96c000)\r\n\tlibcuda.so.1 => /usr/lib/libcuda.so.1 (0x00007fefca9d8000)\r\n\tlibcufft.so.6.5 => not found\r\n\tlibpthread.so.0 => /lib/x86_64-linux-gnu/libpthread.so.0 (0x00007fefca7b9000)\r\n\tlibdl.so.2 => /lib/x86_64-linux-gnu/libdl.so.2 (0x00007fefca5b5000)\r\n\tlibstdc++.so.6 => /usr/lib/x86_64-linux-gnu/libstdc++.so.6 (0x00007fefca2b1000)\r\n\tlibm.so.6 => /home/rmcgibbo/miniconda/envs/3.4/lib/plugins/../libm.so.6 (0x00007fefca02d000)\r\n\tlibgcc_s.so.1 => /lib/x86_64-linux-gnu/libgcc_s.so.1 (0x00007fefc9e17000)\r\n\tlibc.so.6 => /lib/x86_64-linux-gnu/libc.so.6 (0x00007fefc9a51000)\r\n\tlibrt.so.1 => /lib/x86_64-linux-gnu/librt.so.1 (0x00007fefc9848000)\r\n\tlibz.so.1 => /lib/x86_64-linux-gnu/libz.so.1 (0x00007fefc962f000)\r\n\t/lib64/ld-linux-x86-64.so.2 (0x00007fefcc27e000)\r\n```\r\nI don't have CUDA 6.5 installed (I think I have 6.0), so this is expected."}}