what is a cpg sequence
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- CpG islands are defined as sequence ranges where the Obs/Exp value is greater than 0.6 and the GC content is greater than 50%. The expected number of CpG dimers in a window is calculated as the number of 'C's in the window multiplied by the number of 'G's in the window, divided by the window length.
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Whole genome sequencing (The mitochondrial chromosome is not shown.) Whole genome sequencing (also known as WGS, full genome sequencing, complete genome sequencing, or entire genome sequencing) is the process of determining the complete DNA sequence of an organism's genome at a single time.
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- Embed™ universal CPG frits consists of CPG particles conformally coated with a very thin crosslinked polymer film based on polystyrene. The molecular structure of the polymer coating is designed to have a very high density of evenly distributed attachment points for optimum oligo synthesis.mbed™ universal CPG frits consists of CPG particles conformally coated with a very thin crosslinked polymer film based on polystyrene. The molecular structure of the polymer coating is designed to have a very high density of evenly distributed attachment points for optimum oligo synthesis.
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Kids: Definitions RNA sequence is the order of RNA building blocks called ribonucleic acids. DNA (or gene) sequence is the order of deoxyribonucleic acids in a strand of DNA (or a gene). gene - a section of DNA that contains the sequence of nucleic acids that codes for a specific protein. RNA - stands for ribonucleic acid.
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Details of the .cpg file extension CATS PG File. CPG file is a CATS PG File. CATS is a software package which converts semiconductor design data into a useful format for making the circuit templates (also referred to as photomasks) for semiconductor manufacturing. Other types of files may also use the .cpg file extension.
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Medical Definition of Deoxyribonucleic acid DNA sequence: The precise ordering of the bases (A, T, G, C) from which DNA is composed.Base pairs form naturally only between A and T and between G and C, so the base sequence of each single strand of DNA can be simply deduced from that of its partner strand.ase pairs form naturally only between A and T and between G and C, so the base sequence of each single strand of DNA can be simply deduced from that of its partner strand.
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What is a number? Definition of Geometric Sequence. Geometric sequence is a sequence in which each term after the first term a is obtained by multiplying the previous term by a constant r, called the common ratio. It is obvious that a ≠ 0 and r ≠ 0 or 1. Example: 1, 2, 4, 8, 16, 32, . . . is a geometric sequence.
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Contig This map identifies the relative positions and overlap of the clones used for sequencing. Sets of overlapping clones that form a contiguous stretch of DNA are called contigs; the minimum number of clones that form a contig that covers the entire chromosome comprise the tiling path that is used for sequencing.ets of overlapping clones that form a contiguous stretch of DNA are called contigs; the minimum number of clones that form a contig that covers the entire chromosome comprise the tiling path that is used for sequencing.
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Protein coding sequences Protein coding sequences. Protein coding sequences are DNA sequences that are transcribed into mRNA and in which the corresponding mRNA molecules are translated into a polypeptide chain.Every three nucleotides, termed a codon, in a protein coding sequence encodes 1 amino acid in the polypeptide chain.rotein coding sequences. Protein coding sequences are DNA sequences that are transcribed into mRNA and in which the corresponding mRNA molecules are translated into a polypeptide chain.
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Geometric sequences and series Geometric sequences and series. A geometric sequence is a sequence of numbers that follows a pattern were the next term is found by multiplying by a constant called the common ratio, r. Example. Write the first five terms of a geometric sequence in which a 1 =2 and r=3. We use the first given formula: Just as with arithmetic series it is possible to find the sum of a geometric series. It is found by using one of the following formulas: Videolesson: use the formula for the sum of a geometric series to determine the sum when a 1 =4 and r=2 and we have 12 terms. 1  Pre-Algebra. 2  Algebra 1. 3  Algebra 2. 4  Geometry.
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Amino Acids & Proteins An amino acid sequence is the order in which various acids get linked to form a protein or peptide chains. The order that acids get linked together to from a protein is determined by the [order of DNA bases in the gene that encodes the formation of protein]
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Sequence Diagram Sequence Diagram. Sequence diagrams describe interactions among classes in terms of an exchange of messages over time. They're also called event diagrams. A sequence diagram is a good way to visualize and validate various runtime scenarios. These can help to predict how a system will behave and to discover responsibilities a class may need to have in the process of modeling a new system.
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Methods of computing square roots Definition of Geometric Sequence. Geometric sequence is a sequence in which each term after the first term a is obtained by multiplying the previous term by a constant r, called the common ratio. It is obvious that a ≠ 0 and r ≠ 0 or 1.Example: 1, 2, 4, 8, 16, 32, . . . is a geometric sequence. Step1: Geometric sequence is a sequence in which each term after the first term is obtained by multiplying the previous term by a constant. 2  Step 2: 2, 4, 6, 8, 16, 32, 64,...... is the only sequence in the options in which each term is obtained by multiplying the previous term by 2.
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Nucleic acid sequence A nucleic acid sequence is a succession of letters that indicate the order of nucleotides within a DNA (using GACT) or RNA (GACU) molecule.By convention, sequences are usually presented from the 5' end to the 3' end. For DNA, the sense strand is used.ach nucleotide consists of three subunits: a phosphate group and a sugar (ribose in the case of RNA, deoxyribose in DNA) make up the backbone of the nucleic acid strand, and attached to the sugar is one of a set of nucleobases.
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CpG site CpG is shorthand for —C—phosphate—G—, that is, cytosine and guanine separated by only one phosphate; phosphate links any two nucleosides together in DNA. The CpG notation is used to distinguish this linear sequence from the CG base-pairing of cytosine and guanine. The CpG notation can also be interpreted as the cytosine being 5 prime to the guanine base. Cytosines in CpG dinucleotides can be methylated to form 5-methylcytosine. In mammals, methylating the cytosine within a gene can change its expression, a mechanism that is part of a larger field of science studying gene regulation that is called epigenetics.
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Sequences and Series Terms. Arithmetic Sequence-A sequence in which each term is a constant amount greater or less than the previous term. In this type of sequence, a n+1 = a n + d, where d is a constant. Common Ratio-In a geometric sequence, the ratio r between each term and the previous term.
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CpG site The CpG sites or CG sites are regions of DNA where a cytosine nucleotide occurs next to a guanine nucleotide in the linear sequence of bases along its length. CpG is shorthand for —C—phosphate—G—, that is, cytosine and guanine separated by only one phosphate; phosphate links any two nucleosides together in DNA.n mammals, methylating the cytosine within a gene can change its expression, a mechanism that is part of a larger field of science studying gene regulation that is called epigenetics. Enzymes that add a methyl group are called DNA methyltransferases. In mammals, 70% to 80% of CpG cytosines are methylated.
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BIO CH15 The following sequence of DNA is the normal, wild-type gene. 5' atg c-g(red)-g gta gtt agc cga tag 3' A deletion occurs during DNA replication, causing the guanine shown in red to be removed from the nucleotide strand.
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DNA Sequencing Sequencing DNA means determining the order of the four chemical building blocks - called bases - that make up the DNA molecule. The sequence tells scientists the kind of genetic information that is carried in a particular DNA segment. For example, scientists can use sequence information to determine which stretches of DNA contain genes and which stretches carry regulatory instructions, turning genes on or off. In addition, and importantly, sequence data can highlight changes in a gene that may cause disease. In the DNA double helix, the four chemical bases always bond with the same partner to form base pairs. Adenine (A) always pairs with thymine (T); cytosine (C) always pairs with guanine (G). This pairing is the basis for the mechanism by which DNA molecules are copied when cells divide, and the pairing also underlies the methods by which most DNA sequencing experiments are done.
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CpG ODNs Class A (type D) CpG ODNs (CpG-A ODNs) contain a central palindromic phosphodiester (PO) CpG sequence and a PS-modified 3’ poly-G tail. The poly G tails form intermolecular tetrads that result in high molecular weight ordered structures.
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- 2. be pertinent. The CPG should identify how it will benefit the provider or recipient and be related to some high-risk, high-volume or problem-prone area of care or on an area of care that could benefit from quality improvement. 3. define relevant goals and objectives that may be met as a result of its implementation. 4. define expected outcomes. 5. explain anticipated benefits-costs and possible economic benefits, legal, regulatory and other issues that may be affected by its implementation 6. explain anticipated risks and problems.
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Managing Sequences Sequences are database objects from which multiple users can generate unique integers. The sequence generator generates sequential numbers, which can help to generate unique primary keys automatically, and to coordinate keys across multiple rows or tables. Without sequences, sequential values can only be produced programmatically.
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Human genome The HapMap is a haplotype map of the human genome, which will describe the common patterns of human DNA sequence variation. It catalogs the patterns of small-scale variations in the genome that involve single DNA letters, or bases.
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Generic Code Nubmer Sequence Number (GCN SEQ NO) 1 definitions Generic Code Nubmer Sequence Number (GCN SEQ NO) The GCN_SEQNO is a unique number representing a generic formulation. Like the GCN, it is specific to the generic ingredients, route of administration, and drug strength. Both are the same across manufacturers and/or package sizes.
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Nucleic acid sequence A nucleic acid sequence is a succession of letters that indicate the order of nucleotides within a DNA (using GACT) or RNA (GACU) molecule. By convention, sequences are usually presented from the 5' end to the 3' end. For DNA, the sense strand is used.
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- 1 Short description: Inapp chg hCG early preg. 2  ICD-9-CM 631.0 is a billable medical code that can be used to indicate a diagnosis on a reimbursement claim, however, 631.0 should only be used for claims with a date of service on or before September 30, 2015.