ImageJ saving "anisotropic diffusion 2D" plugin output in a macro
<p>I have been trying to create a macro in ImageJ (Fiji) that would allow me to batch process a stack of images in a folder using the "anisotropic diffusion 2D" plug-in and automatically save outputs of the plug-in into a dedicated folder.
However, while I am managing to run the plug-in from the macro, I am not able to save the new processed image that it generates, it only saves the unprocessed starting image. I am wondering whether I have to somehow select the newly created image before attempting to save the image. Any help with this would be much appreciated.</p>