Seg-metrics: a Python package to compute segmentation metrics
Jingnan Jia Marius Staring Berend C. Stoel
In response to a concerning trend of selectively emphasizing metrics in
medical image segmentation (MIS) studies, we introduce \texttt{seg-metrics}, an
open-source Python package for standardized MIS model evaluation. Unlike
existing packages, \texttt{seg-metrics} offers user-friendly interfaces for
various overlap-based and distance-based metrics, providing a comprehensive
solution. \texttt{seg-metrics} supports multiple file formats and is easily
installable through the Python Package Index (PyPI). With a focus on speed and
convenience, \texttt{seg-metrics} stands as a valuable tool for efficient MIS
model assessment.